mRNA_M-pyrifera_M_contig103943.836.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103943.836.1
Unique NamemRNA_M-pyrifera_M_contig103943.836.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A7S4I5D6_9EUKA (Methionine aminopeptidase n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I5D6_9EUKA)

HSP 1 Score: 233 bits (595), Expect = 3.860e-74
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILT 405
            VG VDEES+RLV+V RECLD AIA  KPG LYRD+G +IS   N  GFQVV+SYCGHGIG LFHTTPNVPHYS NKAVG+M+PGH+FTIEPMINMGTWRD LWPD WTAVT DGKRSAQFEETLLVTE GVEILT
Sbjct:  209 VGNVDEESRRLVKVTRECLDKAIAACKPGTLYRDIGGIISSHANAQGFQVVKSYCGHGIGRLFHTTPNVPHYSRNKAVGMMKPGHIFTIEPMINMGTWRDQLWPDDWTAVTKDGKRSAQFEETLLVTEDGVEILT 343
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A6B2L832_9EUKA (Methionine aminopeptidase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L832_9EUKA)

HSP 1 Score: 219 bits (559), Expect = 1.220e-68
Identity = 100/139 (71.94%), Postives = 114/139 (82.01%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILTGKRN 417
            +G V EE K LV  A ECL+ AIA VKPG  YR++G +I+K   KNG+ VVR+YCGHGIGELFHT PNVPHY+NNKA+GVM+PGH+FTIEPMIN G W D LWPD WTAVT DGKRSAQFE TLLVT+TGVEILT +RN
Sbjct:  208 IGNVAEEHKHLVTTAYECLEQAIASVKPGQFYREIGNIINKHATKNGYSVVRTYCGHGIGELFHTAPNVPHYANNKAIGVMKPGHIFTIEPMINAGKWGDDLWPDDWTAVTKDGKRSAQFEHTLLVTDTGVEILTKRRN 346
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A1X2GQS2_9FUNG (Methionine aminopeptidase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GQS2_9FUNG)

HSP 1 Score: 216 bits (549), Expect = 3.940e-67
Identity = 99/135 (73.33%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILT 405
            VG+VDE+ ++LV+ ARECL+ AIA VKPG  YRD GKVI +   KNGF VVR++CGHGI +LFH  PNVPHY+NNKAVG+++PGHVFTIEPMI  GTWRD LWPD WTAVT DGKRSAQFE T+LVTETGVEILT
Sbjct:  219 VGKVDEKGQKLVQTARECLEKAIAMVKPGVRYRDFGKVIEEHAKKNGFSVVRTFCGHGINQLFHCAPNVPHYANNKAVGILKPGHVFTIEPMICEGTWRDQLWPDNWTAVTADGKRSAQFEHTMLVTETGVEILT 353
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A7D9IQG0_PARCT (Methionine aminopeptidase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IQG0_PARCT)

HSP 1 Score: 216 bits (551), Expect = 4.150e-67
Identity = 101/140 (72.14%), Postives = 115/140 (82.14%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILTGKRNA 420
            VG+VDEESK+LV++  ECLD AI  VKPG  YR++G VI K  N NG  VVR+YCGHGI  LFHT PNVPHYS NKAVGVM+ GHVFTIEPMINMGTWRD +WPD WTAVT DGKRSAQFE+TLLVT+TG +ILT + +A
Sbjct:  227 VGDVDEESKKLVKITHECLDEAIKIVKPGIRYREVGNVIQKHANNNGLSVVRTYCGHGIHRLFHTAPNVPHYSKNKAVGVMKKGHVFTIEPMINMGTWRDEVWPDNWTAVTQDGKRSAQFEQTLLVTDTGCDILTRRLDA 366
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A2G4SNC0_RHIZD (Methionine aminopeptidase n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SNC0_RHIZD)

HSP 1 Score: 215 bits (547), Expect = 1.230e-66
Identity = 101/139 (72.66%), Postives = 113/139 (81.29%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILTGKRN 417
            VG VDE  K+LV+ ARECL+ AIA  KPG  YRD GKVI +   KNGF VVRS+CGHGI +LFH  P+VPHY+NNKA+GV++PGH FTIEPMI  G WRD LWPD WTAVT DGKRSAQFE+TLLVTETGVEILT KRN
Sbjct:  231 VGNVDERGKQLVQCARECLEKAIAIAKPGVRYRDFGKVIEEHAKKNGFSVVRSFCGHGINQLFHCAPDVPHYANNKAIGVLKPGHCFTIEPMICEGHWRDELWPDNWTAVTCDGKRSAQFEQTLLVTETGVEILTQKRN 369
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A7M5WXJ1_9CNID (Methionine aminopeptidase n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WXJ1_9CNID)

HSP 1 Score: 212 bits (539), Expect = 1.660e-66
Identity = 97/139 (69.78%), Postives = 113/139 (81.29%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILTGKRN 417
            VG+VD++SKRLV+ A + L  A+ EVKPG  YRDLGK I K    NG  V R+YCGHGI  LFHT PNVPHY+ NKAVG+M+PGHVFTIEPMIN+GTW+DTLWPD WTAVT DGKRSAQFE+T LVTETG++ILT + N
Sbjct:  131 VGKVDDDSKRLVQTAYDSLMAAVNEVKPGVRYRDLGKFIQKVAQDNGCSVTRTYCGHGIHRLFHTAPNVPHYAKNKAVGIMKPGHVFTIEPMINLGTWQDTLWPDDWTAVTKDGKRSAQFEQTFLVTETGIDILTARSN 269
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A8H7BZ57_9FUNG (Methionine aminopeptidase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BZ57_9FUNG)

HSP 1 Score: 213 bits (543), Expect = 2.910e-66
Identity = 99/135 (73.33%), Postives = 112/135 (82.96%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILT 405
            VG VDE+ ++LV+ ARECL+ AIA VKPG  YRD GKVI +   KNGF VVRS+CGHGI +LFH +PNVPHY+NNKAVG+ +PGHVFTIEPMI  GTWRD LWPD WTAVT DGKRSAQFE T+LVTE GVEILT
Sbjct:  216 VGNVDEKGQQLVKTARECLEKAIAMVKPGVRYRDFGKVIEEHAKKNGFSVVRSFCGHGINQLFHCSPNVPHYANNKAVGICRPGHVFTIEPMICEGTWRDELWPDNWTAVTVDGKRSAQFEHTMLVTEDGVEILT 350
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A1X2IWX4_9FUNG (Methionine aminopeptidase n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IWX4_9FUNG)

HSP 1 Score: 213 bits (543), Expect = 3.350e-66
Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILT 405
            VG+VDE+ + LV  ARECL+ AIA VKPG  YRD GKVI     KNGF VVR++CGHGI +LFH  PNVPHY+NNKAVG+M+PGHVFTIEPMI  GTWRD LWPD WTAVT DGKRSAQFE T+LVTETGVEILT
Sbjct:  221 VGKVDEKGQLLVNTARECLEKAIALVKPGVRYRDFGKVIEDHAKKNGFSVVRTFCGHGINQLFHCAPNVPHYANNKAVGIMKPGHVFTIEPMICEGTWRDELWPDNWTAVTMDGKRSAQFEHTMLVTETGVEILT 355
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: A0A4P9XRJ2_9FUNG (Methionine aminopeptidase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XRJ2_9FUNG)

HSP 1 Score: 212 bits (540), Expect = 1.150e-65
Identity = 98/137 (71.53%), Postives = 110/137 (80.29%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILTGK 411
            VG VDE  +RLV+ ARECL+ AIA+VKPG LYRDLG VI K     GF VVR+YCGHGI  LFH  PNVPHY+ NKA+GVM+PGHVFTIEPMIN G+W D  WPD WTAVT DGKRSAQFE T++VTETGVEILT +
Sbjct:  221 VGNVDEGGRRLVQAARECLEKAIAQVKPGTLYRDLGTVIDKHARSAGFSVVRTYCGHGINRLFHCAPNVPHYARNKAIGVMKPGHVFTIEPMINEGSWHDEQWPDNWTAVTADGKRSAQFEHTMVVTETGVEILTAR 357
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BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Match: F0Z6C1_DICPU (Methionine aminopeptidase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z6C1_DICPU)

HSP 1 Score: 212 bits (540), Expect = 1.320e-65
Identity = 96/135 (71.11%), Postives = 112/135 (82.96%), Query Frame = 1 
Query:    1 VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQVVRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRDTLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILT 405
            +G VDE+ K+LV+ A ECL+LAIA  KPG LYR+LG VI K   KNGF VV+++CGHG G LFH  P+VPHYSNNKAVGVM+PGHVFTIEPMIN GTW+D  WPD WTAVT DGKRSAQFE TLL+T+TGVE+L+
Sbjct:  221 IGNVDEQGKKLVQTAYECLELAIAICKPGVLYRELGNVIQKHAKKNGFSVVKNFCGHGTGRLFHCVPDVPHYSNNKAVGVMKPGHVFTIEPMINEGTWQDQFWPDGWTAVTADGKRSAQFEHTLLITDTGVEVLS 355
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103943.836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I5D6_9EUKA3.860e-7480.74Methionine aminopeptidase n=2 Tax=Vannella sp. CB-... [more]
A0A6B2L832_9EUKA1.220e-6871.94Methionine aminopeptidase n=1 Tax=Arcella intermed... [more]
A0A1X2GQS2_9FUNG3.940e-6773.33Methionine aminopeptidase n=1 Tax=Hesseltinella ve... [more]
A0A7D9IQG0_PARCT4.150e-6772.14Methionine aminopeptidase n=1 Tax=Paramuricea clav... [more]
A0A2G4SNC0_RHIZD1.230e-6672.66Methionine aminopeptidase n=4 Tax=Rhizopus TaxID=4... [more]
A0A7M5WXJ1_9CNID1.660e-6669.78Methionine aminopeptidase n=2 Tax=Clytia hemisphae... [more]
A0A8H7BZ57_9FUNG2.910e-6673.33Methionine aminopeptidase n=1 Tax=Apophysomyces os... [more]
A0A1X2IWX4_9FUNG3.350e-6674.07Methionine aminopeptidase n=1 Tax=Absidia repens T... [more]
A0A4P9XRJ2_9FUNG1.150e-6571.53Methionine aminopeptidase n=1 Tax=Thamnocephalis s... [more]
F0Z6C1_DICPU1.320e-6571.11Methionine aminopeptidase n=1 Tax=Dictyostelium pu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103943contigM-pyrifera_M_contig103943:174..648 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Preferred nameMETAP1
KEGG koko:K01265
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008277,GO:0009889,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0016787,GO:0018193,GO:0018206,GO:0019222,GO:0019538,GO:0022400,GO:0023051,GO:0031323,GO:0031326,GO:0031365,GO:0032101,GO:0032268,GO:0034248,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:2000112
EggNOG free text desc.metalloexopeptidase activity
EggNOG OGsCOG0024@1,KOG2738@2759
EC3.4.11.18
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons2
Taxonomic scopeEukaryota
Seed ortholog score213.4
Seed ortholog evalue6.9e-53
Seed eggNOG ortholog5786.XP_003283011.1
Model size423
Cds size423
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815545.1194525-CDS-M-pyrifera_M_contig103943:173..5201622815545.1194525-CDS-M-pyrifera_M_contig103943:173..520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103943 174..520 -
1692277457.2613585-CDS-M-pyrifera_M_contig103943:173..5201692277457.2613585-CDS-M-pyrifera_M_contig103943:173..520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103943 174..520 -
1622815545.134863-CDS-M-pyrifera_M_contig103943:572..6481622815545.134863-CDS-M-pyrifera_M_contig103943:572..648Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103943 573..648 -
1692277457.2771099-CDS-M-pyrifera_M_contig103943:572..6481692277457.2771099-CDS-M-pyrifera_M_contig103943:572..648Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103943 573..648 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103943.836.1prot_M-pyrifera_M_contig103943.836.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103943 174..648 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103943.836.1

>prot_M-pyrifera_M_contig103943.836.1 ID=prot_M-pyrifera_M_contig103943.836.1|Name=mRNA_M-pyrifera_M_contig103943.836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp
VGEVDEESKRLVRVARECLDLAIAEVKPGALYRDLGKVISKFVNKNGFQV
VRSYCGHGIGELFHTTPNVPHYSNNKAVGVMQPGHVFTIEPMINMGTWRD
TLWPDQWTAVTTDGKRSAQFEETLLVTETGVEILTGKRNA*
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mRNA from alignment at M-pyrifera_M_contig103943:174..648-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103943.836.1 ID=mRNA_M-pyrifera_M_contig103943.836.1|Name=mRNA_M-pyrifera_M_contig103943.836.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=475bp|location=Sequence derived from alignment at M-pyrifera_M_contig103943:174..648- (Macrocystis pyrifera P11B4 male)
GTTGGAGAGGTGGATGAGGAGAGCAAGAGGCTGGTGCGCGTGGCCAGGGA
GTGCCTCGACTTGGCCATCGCCGAAGGTACGGCTGCAGCGGCGTGCAGGT
CCCTGGCAGGTCGCTGACGTGCGTGCAGTGAAGCCAGGCGCCCTTTACCG
TGACCTGGGAAAGGTTATCTCCAAGTTCGTCAACAAGAACGGCTTCCAGG
TGGTGCGCAGCTACTGCGGCCACGGCATCGGAGAGCTCTTCCACACGACG
CCGAACGTGCCGCACTACAGCAACAACAAGGCCGTGGGCGTCATGCAGCC
CGGCCACGTCTTCACCATCGAGCCCATGATCAACATGGGGACCTGGCGGG
ATACGCTCTGGCCCGACCAGTGGACCGCCGTCACCACCGACGGCAAGCGG
TCGGCCCAGTTCGAAGAGACCCTTCTAGTGACAGAGACTGGTGTTGAGAT
CCTCACTGGCAAGCGGAACGCTTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103943:174..648-

>mRNA_M-pyrifera_M_contig103943.836.1 ID=mRNA_M-pyrifera_M_contig103943.836.1|Name=mRNA_M-pyrifera_M_contig103943.836.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig103943:174..648- (Macrocystis pyrifera P11B4 male)
GTTGGAGAGGTGGATGAGGAGAGCAAGAGGCTGGTGCGCGTGGCCAGGGA
GTGCCTCGACTTGGCCATCGCCGAAGGTTGGAGAGGTGGATGAGGAGAGC
AAGAGGCTGGTGCGCGTGGCCAGGGAGTGCCTCGACTTGGCCATCGCCGA
AGTGAAGCCAGGCGCCCTTTACCGTGACCTGGGAAAGGTTATCTCCAAGT
TCGTCAACAAGAACGGCTTCCAGGTGGTGCGCAGCTACTGCGGCCACGGC
ATCGGAGAGCTCTTCCACACGACGCCGAACGTGCCGCACTACAGCAACAA
CAAGGCCGTGGGCGTCATGCAGCCCGGCCACGTCTTCACCATCGAGCCCA
TGATCAACATGGGGACCTGGCGGGATACGCTCTGGCCCGACCAGTGGACC
GCCGTCACCACCGACGGCAAGCGGTCGGCCCAGTTCGAAGAGACCCTTCT
AGTGACAGAGACTGGTGTTGAGATCCTCACTGGCAAGCGGAACGCTTAGT
GAAGCCAGGCGCCCTTTACCGTGACCTGGGAAAGGTTATCTCCAAGTTCG
TCAACAAGAACGGCTTCCAGGTGGTGCGCAGCTACTGCGGCCACGGCATC
GGAGAGCTCTTCCACACGACGCCGAACGTGCCGCACTACAGCAACAACAA
GGCCGTGGGCGTCATGCAGCCCGGCCACGTCTTCACCATCGAGCCCATGA
TCAACATGGGGACCTGGCGGGATACGCTCTGGCCCGACCAGTGGACCGCC
GTCACCACCGACGGCAAGCGGTCGGCCCAGTTCGAAGAGACCCTTCTAGT
GACAGAGACTGGTGTTGAGATCCTCACTGGCAAGCGGAACGCTTAG
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