mRNA_M-pyrifera_M_contig103829.816.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103829.816.1
Unique NamemRNA_M-pyrifera_M_contig103829.816.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: A0A7S4HY74_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HY74_9EUKA)

HSP 1 Score: 155 bits (393), Expect = 4.630e-42
Identity = 81/154 (52.60%), Postives = 117/154 (75.97%), Query Frame = 1
Query:    7 FTRP-DSDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLKLTAKAAK 465
            FTRP DS S+ E++++  ++ +LD  NI+  FVSLL+ERR+IFCA K++TLS+ +QA +AL+YP +WQHI+IP+LP SLLS+ CAPMPFVVG+L S ++EVL LPMD V II +D N F++  ++    DL+L+P+ F++ L + L+  AKA K
Sbjct:  180 FTRPRDSGSQLEHLELKDILCSLDDRNILIVFVSLLLERRIIFCATKLSTLSSCIQAAVALVYPFTWQHIYIPVLPKSLLSFVCAPMPFVVGILRSELNEVLSLPMDEVLIIDIDKNDFIRTPADSETHDLNLIPSNFVSQLRRTLRNAAKAVK 333          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: L8GXI7_ACACA (DENN (AEX3) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GXI7_ACACA)

HSP 1 Score: 137 bits (346), Expect = 1.000e-34
Identity = 82/156 (52.56%), Postives = 105/156 (67.31%), Query Frame = 1
Query:    7 FTRPD-SDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLP--MDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLKLTAKAAK 465
            FTRPD SDS F+ V+   L+  LDA N+I  F SLLVERRVIF A +++ LS+ VQA +ALLYP SWQH++IP+LP+SLL++CCAPMPFVVG+L SS+ E+ KL   M+ V I+ +D NKFL   S+    D  LLP      L K +    K  K
Sbjct:  169 FTRPDDSDSMFDYVNFEPLLHMLDAINVISVFTSLLVERRVIFIADELSVLSSCVQAAVALLYPFSWQHVYIPVLPSSLLTFCCAPMPFVVGILRSSVAELNKLSDAMEEVAIVDIDRNKFL---SDTASHDFGLLPGNVAAPLLKAVAGACKTVK 321          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: A0A7S4HMH4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HMH4_9EUKA)

HSP 1 Score: 134 bits (338), Expect = 8.390e-34
Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 1
Query:    1 WKFTRPDSDSEF-ENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLKLTAKAAK 465
            W+FTRP+ +  F E+V    L+  +D   I+  F SLLVERR IF + K++ LS+ VQ+++ALLYPL+WQHI IP+LPASLLS+CCAPMPFVVG++ SS+ E+  LPM+ V II +D+  FL+  +    DD  LLP  F   + + +K   K  K
Sbjct:   52 WRFTRPNEEDSFLEHVAFEPLLNHMDHEMILILFASLLVERRTIFISSKLSLLSSCVQSLLALLYPLAWQHICIPVLPASLLSFCCAPMPFVVGIMPSSVPEMRTLPMEEVLIIDVDNQTFLEKPA--FVDDYQLLPDEFWAPVLRAVKEAKKNIK 205          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: L8GIG9_ACACA (DENN (AEX3) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIG9_ACACA)

HSP 1 Score: 132 bits (333), Expect = 3.940e-33
Identity = 75/139 (53.96%), Postives = 103/139 (74.10%), Query Frame = 1
Query:    1 WKFTRPD-SDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLP--MDAVTIIMLDDNKFLQVSSEEMEDDLDLLP 408
            + F RPD SDS  ++V+   LV  L   NI+ AF SLLVERR+IF +++++TLSA VQA +A+LYP SWQH+FIP+LPASLLS+CCAPMPFVVGVL SS++E+ ++   M+ V I+ LDD++ +   S++   D  LLP
Sbjct:  166 YTFRRPDDSDSLLDHVNFRPLVTLLSPDNILAAFASLLVERRIIFISERVSTLSACVQACVAILYPFSWQHVFIPVLPASLLSFCCAPMPFVVGVLRSSVEELQEMSRNMEDVVIVDLDDDRVIPPGSQDT--DAALLP 302          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: A0A0S7JJ29_9TELE (ST5 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JJ29_9TELE)

HSP 1 Score: 117 bits (292), Expect = 2.090e-29
Identity = 62/144 (43.06%), Postives = 98/144 (68.06%), Query Frame = 1
Query:   13 RPDSDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLK 444
            R  +DS  E+VD  +L + L    ++R F SLL+ERRVIF A K++TLS+ + A++ALLYP SWQH FIP+LPAS+L   C P PF+VG+L+SS+ ++ +LP++   ++ L  ++F++    +M+D+  LLP +    L + L+
Sbjct:   99 RRPNDSRLEHVDFDSLFRCLSVRQVLRVFASLLLERRVIFVADKLSTLSSCMHAVVALLYPFSWQHTFIPVLPASMLDIVCCPTPFLVGLLSSSLPKLKELPVEEALMVDLGTDRFIR----QMDDEASLLPRKLQAALEQALE 238          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: A0A0S7JGV2_9TELE (ST5 n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JGV2_9TELE)

HSP 1 Score: 117 bits (292), Expect = 8.670e-29
Identity = 62/144 (43.06%), Postives = 98/144 (68.06%), Query Frame = 1
Query:   13 RPDSDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLK 444
            R  +DS  E+VD  +L + L    ++R F SLL+ERRVIF A K++TLS+ + A++ALLYP SWQH FIP+LPAS+L   C P PF+VG+L+SS+ ++ +LP++   ++ L  ++F++    +M+D+  LLP +    L + L+
Sbjct:  168 RRPNDSRLEHVDFDSLFRCLSVRQVLRVFASLLLERRVIFVADKLSTLSSCMHAVVALLYPFSWQHTFIPVLPASMLDIVCCPTPFLVGLLSSSLPKLKELPVEEALMVDLGTDRFIR----QMDDEASLLPRKLQAALEQALE 307          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: L8GTF2_ACACA (DENN (AEX3) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GTF2_ACACA)

HSP 1 Score: 119 bits (298), Expect = 2.860e-28
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 1
Query:    1 WKFTRPD-SDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLP--MDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLK 444
            + FTRPD S+S  ++V+   L+  LDAPNI     SLL+ERR+IF A  + TLS+ VQA  ++LYP +WQHIFIP++P SLLS+CCAPMPF+VG+L   + E+  L   M+ V ++ +D+NK L    E+M DD+ L+P   L  L + L+
Sbjct:  273 YAFTRPDDSESLLDHVNFEPLLHFLDAPNIASILASLLMERRMIFIATNLNTLSSCVQAAASILYPFNWQHIFIPVVPQSLLSFCCAPMPFLVGILRVHLAELKTLSDAMEEVVVVDVDNNKVL--FPEDM-DDVKLVPPVLLDPLLQSLQ 420          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: A0A4W6CZJ1_LATCA (DENN domain containing 2B n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6CZJ1_LATCA)

HSP 1 Score: 115 bits (287), Expect = 3.630e-28
Identity = 62/144 (43.06%), Postives = 97/144 (67.36%), Query Frame = 1
Query:   13 RPDSDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLK 444
            R  +DS  E+VD  +L   L    +IR F SLL+ERRVIF A+K++TLS+ + A++ALLYP SWQH FIP+LP S+L   C P PF+VG+L+SS+ ++ +LP++   ++ L  ++F++    +M+D+  LLP +    L + L+
Sbjct:   54 RRPTDSRLEHVDFDSLFGCLSIRQVIRVFASLLLERRVIFVAEKLSTLSSCMHAVVALLYPFSWQHTFIPVLPGSMLDIVCCPTPFLVGLLSSSMPKLKELPVEEALMVDLGTDRFIR----QMDDEASLLPRKLQAALEQALE 193          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: A0A6J2W9U7_CHACN (suppression of tumorigenicity 5 protein-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W9U7_CHACN)

HSP 1 Score: 119 bits (297), Expect = 3.900e-28
Identity = 63/144 (43.75%), Postives = 96/144 (66.67%), Query Frame = 1
Query:   13 RPDSDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLK 444
            R  +DS  E+VD+ +L   L  P ++R F SLL+ERRVIF A K++TLS+   A++ALLYP SWQH FIP+LPAS+L   C P PF+VG+L+SS+  + +LP++   ++ L  + F++    +M+D+  LLP +    L + L+
Sbjct:  733 RRPADSRLEHVDLRSLFSCLSVPQVVRVFASLLLERRVIFVADKLSTLSSCAHAVLALLYPFSWQHTFIPVLPASMLDMVCCPTPFLVGLLSSSLPRLQQLPLEETLMVDLRTDCFIR----QMDDEATLLPRKLQAALEQALE 872          
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Match: UPI0005235648 (suppression of tumorigenicity 5 protein n=1 Tax=Tauraco erythrolophus TaxID=121530 RepID=UPI0005235648)

HSP 1 Score: 114 bits (286), Expect = 5.290e-28
Identity = 62/140 (44.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query:   25 DSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKITTLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSIDEVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLK 444
            DS  E+VD   L + L    IIR F SLL+ERRVIF A K++TLS+   A++ALLYP SWQH FIP+LP+S++   C P PF+VG+L+SS+ ++ +LP++ V ++ L  ++F++    +M+D+  LLP +    L + L+
Sbjct:   82 DSRLEHVDFECLFKCLSVRQIIRIFASLLLERRVIFVADKLSTLSSCSHAVVALLYPFSWQHTFIPVLPSSMIDIVCCPTPFLVGLLSSSLPKLKELPVEEVLMVNLGSDRFIR----QMDDEDTLLPRKLQAALEQALE 217          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103829.816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HY74_9EUKA4.630e-4252.60Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
L8GXI7_ACACA1.000e-3452.56DENN (AEX3) domain containing protein n=1 Tax=Acan... [more]
A0A7S4HMH4_9EUKA8.390e-3448.72Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
L8GIG9_ACACA3.940e-3353.96DENN (AEX3) domain containing protein n=1 Tax=Acan... [more]
A0A0S7JJ29_9TELE2.090e-2943.06ST5 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxI... [more]
A0A0S7JGV2_9TELE8.670e-2943.06ST5 n=1 Tax=Poeciliopsis prolifica TaxID=188132 Re... [more]
L8GTF2_ACACA2.860e-2847.68DENN (AEX3) domain containing protein n=1 Tax=Acan... [more]
A0A4W6CZJ1_LATCA3.630e-2843.06DENN domain containing 2B n=1 Tax=Lates calcarifer... [more]
A0A6J2W9U7_CHACN3.900e-2843.75suppression of tumorigenicity 5 protein-like n=1 T... [more]
UPI00052356485.290e-2844.29suppression of tumorigenicity 5 protein n=1 Tax=Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103829contigM-pyrifera_M_contig103829:33..497 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score118.2
Seed ortholog evalue3.3e-24
Seed eggNOG ortholog144197.XP_008298285.1
Preferred nameST5
KEGG koko:K20161
Hectar predicted targeting categoryother localisation
GOsGO:0001932,GO:0001934,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0008150,GO:0009893,GO:0009966,GO:0009967,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0017016,GO:0017112,GO:0017137,GO:0019220,GO:0019222,GO:0019899,GO:0023051,GO:0023056,GO:0031267,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032268,GO:0032270,GO:0042325,GO:0042327,GO:0043408,GO:0043410,GO:0045937,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0051020,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065009,GO:0070372,GO:0070374,GO:0080090,GO:0098772,GO:1902531,GO:1902533
EggNOG free text desc.Suppression of tumorigenicity 5
EggNOG OGs38C3D@33154,3BDB1@33208,3CTQV@33213,481B0@7711,48YA1@7742,49SAE@7898,KOG3569@1,KOG3569@2759
COG Functional cat.T
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size465
Cds size465
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815544.265098-CDS-M-pyrifera_M_contig103829:32..4971622815544.265098-CDS-M-pyrifera_M_contig103829:32..497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103829 33..497 +
1692277456.9290702-CDS-M-pyrifera_M_contig103829:32..4971692277456.9290702-CDS-M-pyrifera_M_contig103829:32..497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103829 33..497 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103829.816.1prot_M-pyrifera_M_contig103829.816.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103829 33..497 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103829.816.1

>prot_M-pyrifera_M_contig103829.816.1 ID=prot_M-pyrifera_M_contig103829.816.1|Name=mRNA_M-pyrifera_M_contig103829.816.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
WKFTRPDSDSEFENVDIAALVQTLDAPNIIRAFVSLLVERRVIFCAKKIT
TLSAVVQAIMALLYPLSWQHIFIPILPASLLSYCCAPMPFVVGVLASSID
EVLKLPMDAVTIIMLDDNKFLQVSSEEMEDDLDLLPARFLTTLTKQLKLT
AKAAK
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mRNA from alignment at M-pyrifera_M_contig103829:33..497+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103829.816.1 ID=mRNA_M-pyrifera_M_contig103829.816.1|Name=mRNA_M-pyrifera_M_contig103829.816.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig103829:33..497+ (Macrocystis pyrifera P11B4 male)
TGGAAATTCACGCGGCCAGACAGCGACAGCGAGTTCGAGAACGTGGACAT TGCGGCCCTGGTGCAGACCCTGGACGCACCCAACATCATCCGAGCCTTCG TCTCGCTGCTCGTCGAGAGGAGGGTCATCTTCTGCGCCAAGAAGATCACC ACCCTCTCCGCGGTGGTGCAAGCGATCATGGCGCTGCTCTACCCGCTCTC CTGGCAGCACATCTTCATTCCCATCCTCCCGGCCTCGCTGCTGTCCTACT GCTGCGCACCCATGCCCTTCGTGGTGGGCGTGCTGGCCTCAAGCATCGAC GAGGTGCTCAAGCTGCCCATGGACGCAGTCACCATCATCATGCTCGACGA CAACAAGTTCCTGCAGGTGTCCAGCGAGGAGATGGAGGACGACCTCGACT TGCTTCCCGCCCGCTTCCTTACCACGCTCACCAAGCAGCTCAAGCTCACC GCCAAGGCGGCCAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103829:33..497+

>mRNA_M-pyrifera_M_contig103829.816.1 ID=mRNA_M-pyrifera_M_contig103829.816.1|Name=mRNA_M-pyrifera_M_contig103829.816.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig103829:33..497+ (Macrocystis pyrifera P11B4 male)
TGGAAATTCACGCGGCCAGACAGCGACAGCGAGTTCGAGAACGTGGACAT
TGCGGCCCTGGTGCAGACCCTGGACGCACCCAACATCATCCGAGCCTTCG
TCTCGCTGCTCGTCGAGAGGAGGGTCATCTTCTGCGCCAAGAAGATCACC
ACCCTCTCCGCGGTGGTGCAAGCGATCATGGCGCTGCTCTACCCGCTCTC
CTGGCAGCACATCTTCATTCCCATCCTCCCGGCCTCGCTGCTGTCCTACT
GCTGCGCACCCATGCCCTTCGTGGTGGGCGTGCTGGCCTCAAGCATCGAC
GAGGTGCTCAAGCTGCCCATGGACGCAGTCACCATCATCATGCTCGACGA
CAACAAGTTCCTGCAGGTGTCCAGCGAGGAGATGGAGGACGACCTCGACT
TGCTTCCCGCCCGCTTCCTTACCACGCTCACCAAGCAGCTCAAGCTCACC
GCCAAGGCGGCCAAGTGGAAATTCACGCGGCCAGACAGCGACAGCGAGTT
CGAGAACGTGGACATTGCGGCCCTGGTGCAGACCCTGGACGCACCCAACA
TCATCCGAGCCTTCGTCTCGCTGCTCGTCGAGAGGAGGGTCATCTTCTGC
GCCAAGAAGATCACCACCCTCTCCGCGGTGGTGCAAGCGATCATGGCGCT
GCTCTACCCGCTCTCCTGGCAGCACATCTTCATTCCCATCCTCCCGGCCT
CGCTGCTGTCCTACTGCTGCGCACCCATGCCCTTCGTGGTGGGCGTGCTG
GCCTCAAGCATCGACGAGGTGCTCAAGCTGCCCATGGACGCAGTCACCAT
CATCATGCTCGACGACAACAAGTTCCTGCAGGTGTCCAGCGAGGAGATGG
AGGACGACCTCGACTTGCTTCCCGCCCGCTTCCTTACCACGCTCACCAAG
CAGCTCAAGCTCACCGCCAAGGCGGCCAAG
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