mRNA_M-pyrifera_M_contig103638.778.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A7Y1UXA2_9ACTN (DUF4389 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1UXA2_9ACTN) HSP 1 Score: 110 bits (275), Expect = 2.260e-28 Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 4 QTAADPGGSPVVIDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFSTD 303 +T +PGGSPV + FEP ERDRLT LR+ WLIP A+++ ++ + W+ AFFAV+ TGRWPEGL +V+K LR+ +R Y LTD+YPPF+ + Sbjct: 94 RTLEEPGGSPVSVSFEPQFEERDRLTCVLRIFWLIPIAIFSAIVYFAATILWIGAFFAVLFTGRWPEGLLDFVVKALRLNLRANTYGSFLTDQYPPFALE 193
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A6B1G9P8_9ACTN (DUF4389 domain-containing protein n=3 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1G9P8_9ACTN) HSP 1 Score: 105 bits (263), Expect = 1.490e-26 Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 7 TAADPGGSPVVIDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFSTD 303 +A +PG +PVV+D EP L +R+RLTV RL+ +IPA ++ + ++ V VL FFAV+ TGRWPEG+R WV+ V +R+ AY LLTD+YPPFS D Sbjct: 95 SAPEPGDTPVVVDIEPQLTDRNRLTVLFRLILVIPALVFTAITGLITAVLVVLGFFAVLFTGRWPEGMRGWVVSWFGVNLRMNAYLHLLTDQYPPFSLD 193
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A7K2DAM9_9ACTN (DUF4389 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DAM9_9ACTN) HSP 1 Score: 97.8 bits (242), Expect = 6.480e-24 Identity = 51/97 (52.58%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 13 ADPGGSPVVIDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFSTD 303 AD G S + F PAL R+RLTV LR + +IPA ++ ++I V+ VC +L FFAV+ TGRWP+GLR +V+ V +R Y LLLTDEYPPFS D Sbjct: 51 ADAGRSQTSVSFSPALEGRNRLTVLLRPITVIPAYIFNLIIVVIATVCIILGFFAVLFTGRWPDGLRRFVVGSHLVSLRYFTYGLLLTDEYPPFSMD 147
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A6L7XE70_9ACTN (DUF4389 domain-containing protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XE70_9ACTN) HSP 1 Score: 96.7 bits (239), Expect = 5.880e-23 Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 1 Query: 16 DPGGSPVVIDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFSTD 303 DPG + F PAL R+RLTV LR + +IPA ++ ++I V+ VC +L FFAV+ TGRWP+GLR +V+ V +R Y LLLTDEYPPFS D Sbjct: 98 DPGRTQTSASFSPALEGRNRLTVLLRPITVIPAYIFNLIIVVIATVCIILGFFAVLFTGRWPDGLRRFVVGSHLVSLRYFTYGLLLTDEYPPFSMD 193
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A3B7D9T4_9ACTN (Uncharacterized protein n=2 Tax=Aeromicrobium sp. A1-2 TaxID=2107713 RepID=A0A3B7D9T4_9ACTN) HSP 1 Score: 87.4 bits (215), Expect = 3.320e-19 Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 1 Query: 7 TAADPGGSPVV-IDFEPALGERDRLTVALRLLWLIPAALY-AIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFST 300 T ADPG P V +DF PA+ R+RLT+ RL IP + ++ V+G+V V+ +FAV+ TGRWP GLR +V+ M R +R+ +Y LLTD+YPPFST Sbjct: 111 TLADPGDDPRVRVDFAPAIENRNRLTIFFRLFLAIPQFIVLGLISMVLGLVV-VIGWFAVLITGRWPSGLRNFVIGMTRWSLRVNSYLYLLTDDYPPFST 209
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A6N2DQ46_9ACTN (DUF4389 domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DQ46_9ACTN) HSP 1 Score: 87.8 bits (216), Expect = 3.780e-19 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 7 TAADPGGSPVVIDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFSTD 303 TA DPG PVV+ EP L +R+RLTVALR +W+IP A++A+VI + TGRW GLR++V+ R+ +R+ AY LL D YPPFS + Sbjct: 118 TATDPGTDPVVVHLEPQLVDRNRLTVALRFIWIIPIAVFAVVIVIAMWFXXXXXXXXXXFTGRWSNGLRSFVVGAGRLWLRVNAYGRLLVDVYPPFSLE 216
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A0Q8W589_9ACTN (Uncharacterized protein n=3 Tax=Aeromicrobium TaxID=2040 RepID=A0A0Q8W589_9ACTN) HSP 1 Score: 86.7 bits (213), Expect = 5.340e-19 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 1 AQTAADPGGSPVV-IDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFS 297 A T ADPG P V +D++ R+RLT+ RLL IP L IV+ + +++A+FAV+ TGRWP GLR +V+ + R RL AY LLTD YPPFS Sbjct: 99 ATTLADPGDDPRVRVDYQSETDGRNRLTIFFRLLLAIPHFLVLIVLGIAAFFVYLIAWFAVLFTGRWPNGLRNFVVGLTRWTTRLNAYMYLLTDAYPPFS 198
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A0S9R7R9_9ACTN (Uncharacterized protein n=5 Tax=Actinomycetia TaxID=1760 RepID=A0A0S9R7R9_9ACTN) HSP 1 Score: 85.9 bits (211), Expect = 1.360e-18 Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 7 TAADPGGSPVV-IDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFS 297 + ADPG P V +D P + R RLT+ R+L LIP + + V V+ FFAVI GRWPEG+R +V+ LR R+ AYA LLTD+YPPFS Sbjct: 113 STADPGTDPHVHVDVVPQVEGRSRLTIFFRILMLIPQMFVLYFVTIAAAVVHVIGFFAVIVLGRWPEGMRDFVVGWLRWNQRVSAYAYLLTDDYPPFS 210
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A5C8NG43_9ACTN (DUF4389 domain-containing protein n=1 Tax=Aeromicrobium terrae TaxID=2498846 RepID=A0A5C8NG43_9ACTN) HSP 1 Score: 78.6 bits (192), Expect = 8.260e-16 Identity = 51/99 (51.52%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 16 DPGGSPVV-IDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAF---FAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFST 300 DPG P V ID P+ R+RLT+ RLL IP IV+A+VGI V+ F FAVI GRWPEG+ +V+ + R RL +Y LLTDEYPPFST Sbjct: 112 DPGTDPRVRIDVVPSTEGRNRLTIFFRLLLAIPQF---IVLALVGIAVGVVVFVGWFAVIILGRWPEGMGRFVIGVSRWNTRLVSYVYLLTDEYPPFST 207
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Match: A0A7V0IS59_9ACTN (DUF4389 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V0IS59_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 1.020e-15 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 7 TAADPGGSPVVIDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIVCWVLAFFAVIATGRWPEGLRTWVLKMLRVGVRLQAYALLLTDEYPPFSTD 303 TA DPG + + + L R+RLTV RL+ +IP + + + ++ V LA+FAV+ TGR+P G+R +++ + R R+ Y L+TDEYPPF+TD Sbjct: 102 TADDPGDHSIQLSVQADLDGRNRLTVFFRLIMIIPLVVVSYIYMLIASVIAFLAWFAVLFTGRYPAGMRNFMIGISRYMTRVNVYGTLITDEYPPFNTD 200 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103638.778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103638.778.1 >prot_M-pyrifera_M_contig103638.778.1 ID=prot_M-pyrifera_M_contig103638.778.1|Name=mRNA_M-pyrifera_M_contig103638.778.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp AQTAADPGGSPVVIDFEPALGERDRLTVALRLLWLIPAALYAIVIAVVGIback to top mRNA from alignment at M-pyrifera_M_contig103638:3..308+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103638.778.1 ID=mRNA_M-pyrifera_M_contig103638.778.1|Name=mRNA_M-pyrifera_M_contig103638.778.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig103638:3..308+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103638:3..308+ >mRNA_M-pyrifera_M_contig103638.778.1 ID=mRNA_M-pyrifera_M_contig103638.778.1|Name=mRNA_M-pyrifera_M_contig103638.778.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig103638:3..308+ (Macrocystis pyrifera P11B4 male)back to top |