prot_M-pyrifera_M_contig103635.776.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig103635.776.1
Unique Name	prot_M-pyrifera_M_contig103635.776.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	188

Homology

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: W7U2X6_9STRA (U2 snrnp-associated splicing factor putative n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2X6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.540e-8
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0

Query:  144 RFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVW 187
            RFLW   +PE  +YRWRV SF+ GDTE +WR  PF++ V GP W
Sbjct:  504 RFLWEGDSPEALFYRWRVFSFLMGDTETRWRVRPFQMTVDGPFW 547

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: A0A7S3RUD6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RUD6_9SPIT)

HSP 1 Score: 63.5 bits (153), Expect = 1.570e-8
Identity = 51/200 (25.50%), Postives = 80/200 (40.00%), Query Frame = 0

Query:    1 DEERAKGTTRGYVAFATREAAVAALSDMQGVLIGGNPLKVTWGRPLRRLASKTSTXXXXXXXXXXXXXXXXXXXXXHSGILPPPASLSSDASGNGXXXXASVGGATGGGMKAKSGSWPAEEVREGDVV-------------FEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVW 187
            +EER +    G+VAF  R  A  A  +M    + G  +++ WG+ + R  ++  T                      SG + PPA+ SS    +     A V           +   P   + + +++             FE    +        RFL+ A+TPEHRYYRW+V+S    DT   W T  F++   GP+W
Sbjct:  159 EEERMRQRLNGFVAFVKRADAAQAKDEMNETELNGFVMRIGWGKAVAR-PTQAITLASLQGRSASASGSAMASTGPPSGHVSPPAAFSSTTPSSNSAASAVVKAQPPRPSGPTTMVLPPTNLGQRELIDRLALFVAEEGHAFEQAIMAREESNSQYRFLFDASTPEHRYYRWKVVSLCACDTMDAWDTGSFQLEAGGPIW 357

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: A0A834IAD5_RHYFE (Uncharacterized protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834IAD5_RHYFE)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-6
Identity = 54/205 (26.34%), Postives = 83/205 (40.49%), Query Frame = 0

Query:    1 DEERAKGTTRGYVAFATREAAVAALSDMQGVLIGGNPLKVTWGR----PLRRLASKTSTXXXXXXXXXXXXXXXXXXXXXHSGILPPPASLSSDASGNGXXXXASVGGATGGGMKAKSGSWPAEE-------------VREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            DEE+A+G   G+VA+ +R+    AL ++ G  I G  +K+ WG+    P   +                              +LP      SD   N     A+V               P+++             VREG + FE    +      + RFL+   +P H YYRW+V S +HGD++++W T  FR+   G VWK
Sbjct:  223 DEEKARGRNCGFVAYMSRKDGERALRNLNGKEIVGYEMKMGWGKSIIIPPHPIYIPPVLLDVSQPPPPSGLPFNAQPAVEDKDVLP-----KSDEELNAILKRATV-----------KVVIPSDKNLLVLIHRMVEFVVREGPM-FEAMIMNRELHNPLFRFLFENHSPAHIYYRWKVYSILHGDSQKEWSTKEFRMFRDGSVWK 410

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: A0A8J9UBM1_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UBM1_BRAAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-6
Identity = 51/192 (26.56%), Postives = 79/192 (41.15%), Query Frame = 0

Query:    1 DEERAKGTTRGYVAFATREAAVAALSDMQGVLIGGNPLKVTWGR----PLRRLASKTSTXXXXXXXXXXXXXXXXXXXXXHSGILPPPASLSSDASGNGXXXXASVGGATGGGMKAKSGSWPAEEVREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            DEE+A+G   G+VA+ +R+    AL ++ G  I G  +K+ WG+    P   +                              ILP  A   +D           V   T   +           VREG + FE    +   +  + RFL+   +P H YYRW++ S  HGD++++W T  FR+   G +WK
Sbjct:  230 DEEKARGRNCGFVAYMSRKDGERALRNLNGKDIVGYEMKLGWGKSVIIPPHPIYIPPCLLEVSMPPPPSGLPFNAQPAPNDVDILPKSAEELTDLL---TRATVKVVIPTDRNLLMLIHRMVEFVVREGPM-FEAMIMNREIQNHMYRFLFENQSPAHTYYRWKLYSITHGDSQKEWSTKEFRMFKDGSIWK 417

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: V5IAX6_ANOGL (U2 snRNP-associated SURP motif-containing protein (Fragment) n=2 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5IAX6_ANOGL)

HSP 1 Score: 57.8 bits (138), Expect = 1.640e-6
Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0

Query:  122 VREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            VREG + FE    +        RFL+   +P H YYRW+V S +HGD++++W+T  FR+   G +WK
Sbjct:  345 VREGPM-FEAMIMNREINNAQFRFLFENQSPTHIYYRWKVFSILHGDSQKEWKTKEFRMFKDGSIWK 410

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: UPI000C20B860 (U2 snRNP-associated SURP motif-containing protein isoform X1 n=2 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C20B860)

HSP 1 Score: 57.8 bits (138), Expect = 1.930e-6
Identity = 48/192 (25.00%), Postives = 78/192 (40.62%), Query Frame = 0

Query:    1 DEERAKGTTRGYVAFATREAAVAALSDMQGVLIGGNPLKVTWGR----PLRRLASKTSTXXXXXXXXXXXXXXXXXXXXXHSGILPPPASLSSDASGNGXXXXASVGGATGGGMKAKSGSWPAEEVREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            DEE+++G   G+VA+ +R+    AL ++ G  I G  +K+ WG+    P   +    S                         +LP      ++  G            T   +           VREG + FE    +      V RFL+   +P H YYRW++ S +HGD++++W    FR+   G +WK
Sbjct:  222 DEEKSRGRNCGFVAYMSRKDGERALRNLNGKDIIGYEMKLGWGKSVVIPPHPIYIPPSLLELSLPPPPSGLPFNAQPQGKDKDVLPKSTEEFNEVLGRAVVKVVIP---TDRNLLMLIHRMVEFVVREGPM-FEAMIMNREINNPVFRFLFENQSPAHLYYRWKIYSIMHGDSQKEWSHKEFRMFTEGSIWK 409

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: A0A8K0D4U6_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0D4U6_9COLE)

HSP 1 Score: 57.4 bits (137), Expect = 2.570e-6
Identity = 48/192 (25.00%), Postives = 79/192 (41.15%), Query Frame = 0

Query:    1 DEERAKGTTRGYVAFATREAAVAALSDMQGVLIGGNPLKVTWGR----PLRRLASKTSTXXXXXXXXXXXXXXXXXXXXXHSGILPPPASLSSDASGNGXXXXASVGGATGGGMKAKSGSWPAEEVREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            DEE+A+G   G+VA+ +R+    AL ++ G  + G  +K+ WG+    P   +    +                         +LP  A   +D               T   +           +REG + FE    +      + RFL+   +P H YYRW++ S +HGD++++W T  FR+  SG  WK
Sbjct:  114 DEEKARGRNCGFVAYMSRKDGERALRNLNGKDVLGYEMKLGWGKSVIIPPHPIYIPPALLELSLPPPPSGLPFNAQPVPKDRDVLPTTAEELNDILSRAVVKVVIP---TDRNLLMLIHRMVEFVIREGPM-FEAMIMNREINNSLFRFLFENQSPAHIYYRWKLYSIMHGDSQKEWSTKEFRMFKSGSAWK 301

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: A0A6P7FQL7_DIAVI (U2 snRNP-associated SURP motif-containing protein n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FQL7_DIAVI)

HSP 1 Score: 57.4 bits (137), Expect = 2.610e-6
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0

Query:  122 VREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            VREG + FE    +   +    RFL+   +P H YYRW+V S +HGD++++W T  FR+  +G +WK
Sbjct:  345 VREGPM-FEAMIMNKEIQNPQFRFLFENQSPSHIYYRWKVYSILHGDSQKEWCTKEFRMFTNGSIWK 410

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: A0A1W4X8J8_AGRPL (U2 snRNP-associated SURP motif-containing protein n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4X8J8_AGRPL)

HSP 1 Score: 55.5 bits (132), Expect = 1.190e-5
Identity = 53/216 (24.54%), Postives = 82/216 (37.96%), Query Frame = 0

Query:    1 DEERAKGTTRGYVAFATREAAVAALSDMQGVLIGGNPLKVTWGRPLRRLASKTSTXXXXXXXXXXXXXXXXXXXXXHSGILPPPASLSSDASG---------------NGXXXXASVGGATGGGMKAKSGSWPAEE-------------VREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            +EE+AKG+  G+VA+  R+ A  AL ++    I G+ +K+ WG+P+                                 + PPP+ L  +A                 N     A V               P +              VREG + FE    +      + RFL+   +P H YYRW+V S  HG+++R+W    FR+   G +WK
Sbjct:  217 EEEKAKGSNCGFVAYMARKDAERALRNLNEKEISGSDIKLGWGKPV----------------ILPPFPIYIPPPLMELSMPPPPSGLPFNAQPIAQDRDILPKTQDELNQILYRAVV-----------KVVMPKDRALLILINRMVEFVVREGPM-FEAMIMNREINNPMFRFLFENQSPSHIYYRWKVFSITHGESQREWSNKEFRMFKEGSIWK 404

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BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Match: UPI00083C6A79 (U2 snRNP-associated SURP motif-containing protein isoform X1 n=6 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C6A79)

HSP 1 Score: 55.5 bits (132), Expect = 1.190e-5
Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = 0

Query:  122 VREGDVVFEVEWPSDARRRRVSRFLWPAATPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK 188
            VREG + FE    +      + RFL+   +P H YYRW++ S +HGD++++W T  FR+   G  WK
Sbjct:  369 VREGPM-FEAMIMNRELHNPLFRFLFENQSPAHIYYRWKIFSIMHGDSQKEWTTREFRMFKDGSPWK 434

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig103635.776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 22


Match Name	E-value	Identity	Description
W7U2X6_9STRA	1.540e-8	56.82	U2 snrnp-associated splicing factor putative n=4 T...	[more]
A0A7S3RUD6_9SPIT	1.570e-8	25.50	Hypothetical protein (Fragment) n=1 Tax=Strombidin...	[more]
A0A834IAD5_RHYFE	1.430e-6	26.34	Uncharacterized protein n=1 Tax=Rhynchophorus ferr...	[more]
A0A8J9UBM1_BRAAE	1.430e-6	26.56	Hypothetical protein n=1 Tax=Brassicogethes aeneus...	[more]
V5IAX6_ANOGL	1.640e-6	40.30	U2 snRNP-associated SURP motif-containing protein ...	[more]
UPI000C20B860	1.930e-6	25.00	U2 snRNP-associated SURP motif-containing protein ...	[more]
A0A8K0D4U6_9COLE	2.570e-6	25.00	Uncharacterized protein n=1 Tax=Ignelater luminosu...	[more]
A0A6P7FQL7_DIAVI	2.610e-6	40.30	U2 snRNP-associated SURP motif-containing protein ...	[more]
A0A1W4X8J8_AGRPL	1.190e-5	24.54	U2 snRNP-associated SURP motif-containing protein ...	[more]
UPI00083C6A79	1.190e-5	38.81	U2 snRNP-associated SURP motif-containing protein ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..58 e-value: 1.4E-6 score: 30.2
None	No IPR available	PANTHER	PTHR23140:SF0	SWAP/SURP DOMAIN-CONTAINING PROTEIN	coord: 1..68 coord: 119..188
None	No IPR available	PANTHER	PTHR23140	RNA PROCESSING PROTEIN LD23810P	coord: 1..68 coord: 119..188
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig103635	contig	M-pyrifera_M_contig103635:1..648 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig103635.776.1	mRNA_M-pyrifera_M_contig103635.776.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig103635 1..648 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig103635.776.1 ID=prot_M-pyrifera_M_contig103635.776.1|Name=mRNA_M-pyrifera_M_contig103635.776.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
DEERAKGTTRGYVAFATREAAVAALSDMQGVLIGGNPLKVTWGRPLRRLA
SKTSTSSSPSSSSSSSSSSSSSSSPSHSGILPPPASLSSDASGNGKGVGA
SVGGATGGGMKAKSGSWPAEEVREGDVVFEVEWPSDARRRRVSRFLWPAA
TPEHRYYRWRVLSFVHGDTERKWRTAPFRVAVSGPVWK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf