mRNA_M-pyrifera_M_contig103622.774.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A7C2AJ27_9BACT (DNA polymerase III subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2AJ27_9BACT) HSP 1 Score: 127 bits (319), Expect = 1.120e-31 Identity = 96/218 (44.04%), Postives = 127/218 (58.26%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAPELDAAEVARHARWASGSPGRALELVGQRRG--EMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPPDALAAGPELAAALAGRDAAWTARLDHVRGTIER---ARRDLDQN 648 E +R VL+R + RMN +AQNALLKTLEEPRPGT+L+L A LL T SR R+R L +E AI+A E AE+ ARW+ GSPGRAL V QRRG +V L L+G L P+ A + +L+ + PGKT +AKAR R R+ LDL+L+ D +L +G+ P L G E+A L R ++ R T+E R D+D+N Sbjct: 118 EGSWRCVLVRMSHRMNTSAQNALLKTLEEPRPGTVLLLETNLAARLLPTIRSRCIRIRMGGLPVEEAHAILAERGLEAGEAELL--ARWSGGSPGRAL--VFQRRGVIPLVRTLEAALSGKLAPLRAAAHIWDLEGEFPGKTPAAKARGRARFALDLMLDLLADAEKLDAGIDPLRLPFG-EVARPLLPRG------IEARRRTLEALLACRSDIDRN 324
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A2D5AZT5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AZT5_9BACT) HSP 1 Score: 119 bits (299), Expect = 1.350e-28 Identity = 97/219 (44.29%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAPELDAAEVARH-ARWASGSPGRALELVGQRRGEMVALLARVLTGDLG-----PMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPPDALAAGPELAAALAGRDAAWTARLDHVRGTIERARRDLDQN 648 E YR V++R+A RMN AQNALLKTLEEPRPGTLLVL LL+T SRV R+RF L+ E AA++ + A EVA R ++GSPGRAL L E ALLAR + D+ P+ A L EL+ + GKT +AKAR RVR LDL LE + SG+PP+ LAAG +A+ +RL+ + R D+D+N Sbjct: 152 EGGYRPVVVREAQRMNVAAQNALLKTLEEPRPGTLLVLETHRPELLLETIRSRVARLRFTALEAEACAALLVEKGL---AREVALELTRASNGSPGRALWL-----SEKGALLAREILWDVARGVTSPVRASRLLWELEGRFAGKTPAAKARERVRLGLDLALELCRERLAFQSGIPPEELAAGATIASLPP------VSRLEEGLEKLMECRADVDRN 356
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A2D6HF36_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HF36_9BACT) HSP 1 Score: 112 bits (281), Expect = 3.990e-26 Identity = 87/213 (40.85%), Postives = 118/213 (55.40%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAPELDAAEVARHARWASGSPGRALELVGQRRGEMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPPDALAAGPELAAALAGRDAAWTARLDHVRGTIERARRDLDQN 648 E +R V LRD DR + AQNALLKTLEEP TLLVL ++ LL+T SR VR E + + TA ++ EA + + + A RW+ G+PGRA EL+ + EM LLA VL G + P+ A L+E+ G T++A+ARAR R + L LE DL RL GV LA G + L G AR+ + +AR+D++ N Sbjct: 117 EGGWRVVCLRDFDRAHAAAQNALLKTLEEPGEATLLVLESSRPGQLLETIRSRCVAVRLEAVGVAETADLL--EAAGVASGDAACLGRWSGGAPGRAHELLREGALEMQPLLAEVLRGTVEPLQAAARLAEVRGDFSGGTDAARARARTRAAVVLALELARDLLRLEHGVEATTLAHG----STLEGWAGVGGARVARTVDALLQARQDVEAN 323
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A7C8CTF6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CTF6_9BACT) HSP 1 Score: 101 bits (251), Expect = 9.890e-22 Identity = 76/178 (42.70%), Postives = 100/178 (56.18%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAPELDAAEVARHARWASGSPGRALELVGQRRGEMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPPDALAAG 543 E RAV++R+ +R N +AQNALLKTLEEP TLL+L + LL T SR V F L TA I+AR E AAE +RW+ GSPG ALEL E+ +LARVL+G P+ A + L + GKT +A+ R + R L L+L D+ L +G P++LA G Sbjct: 134 EGGLRAVIVREFERANESAQNALLKTLEEPGRNTLLILESAHPDVLLATVRSRCICVDFGALSRADTALILARAGFEGAAAEQC--SRWSGGSPGLALELQRGSALEVREILARVLSGQTDPLLASTEVLGLKAEFAGKTPAAQTRTQARAALRLVLGILHDVLALHAGADPESLAHG 309
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A2D5XNS9_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XNS9_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 2.850e-19 Identity = 81/213 (38.03%), Postives = 105/213 (49.30%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAPELDAAEVARHARWASGSPGRALELVGQRRGEMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPPDALAAGPELAAALAGRDAAWTARLDHVRGTIERARRDLDQN 648 EA +R VL+RDADRMN QNA LKTLEEP LL L + LLDT SR+ + L + +ARE PE A R A GSPGR L L + E ++LL R + + L EL + G+T A+ R RVR++L+L LE D RLA+G+ + + L DAA RL+ RRD+D N Sbjct: 155 EAGWRVVLIRDADRMNEETQNAFLKTLEEPGDQVLLALETSRPEALLDTVRSRLVQHTVSSLTTAEVSQALAREVPECSADP--EWLRLAGGSPGRLLSLWRRGAREGLSLLIRAFREPIQAPSLTAELLELPGEFKGRTPKAEERNRVRFLLELGLEVLRDQERLAAGLAGEDVMHAARLQDCPCPSDAARARRLE----VWLEGRRDVDLN 361
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A518ES09_9BACT (DNA polymerase III subunit tau n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ES09_9BACT) HSP 1 Score: 93.2 bits (230), Expect = 8.130e-19 Identity = 85/216 (39.35%), Postives = 107/216 (49.54%), Query Frame = 1 Query: 28 VLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAP-----ELDAAEVARHARWASGSPGRALELVGQRRGEMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPPD----ALAAGPELAAALAGRDAAWTARLDHVRGTIERARRDLDQN 648 +++R+A+ M AQNA LK LEEPRPG L L +SA LL T SRV V+F L LE ++ R+ P + V R R A GSPG AL L + M L+ L G L EL + PGKT +A+ R R R LD+ LE DL R +GV PD L AGP +AA+ DA+ R+ RAR DL N Sbjct: 128 IVVREAEAMLEEAQNAFLKMLEEPRPGVHLFLETSSAGSLLATVRSRVVPVQFGRLTLEQCEEVLWRQKPFRKVTPENQEAVTRLVRIAGGSPGLALRLHKRAAPAMQVLIGDALLGKRSAGDISRELFELKGEFPGKTPAAERRTRARIALDVGLEVLTDLERAVAGVDPDQLPHGLVAGP-IAASGRFSDASSRRRIGEA---WLRAREDLGLN 339
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A2D5W6P7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W6P7_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 1.680e-17 Identity = 74/178 (41.57%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHL---DLETTAAIVAREAPELDAAEVARHARWASGSPGRALELVGQRRGEMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPPDAL 534 E YR VL+R A+ MN AQNALLKTLEEP P LVLV + LL+T SR V F L +LE + A L RW GSPGR LEL GQRR + L +L G+ +L +L+ GKT +A+ R R+R VL++ LE L LA G+P A+ Sbjct: 143 EGGYRVVLVRGAELMNSAAQNALLKTLEEPAPRVALVLVTSRPRQLLETVRSRCVAVGFSPLAEAELEEVLGGLDGAAEVLADGGRRDLLRWGLGSPGRVLELWGQRRLAVRKELVELLAGERQAAQCAASLRDLEGDWGGKTATAQGRGRLRVVLEVGLELLRALV-LAEGLPAAAV 319
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A2E5X2T9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X2T9_9BACT) HSP 1 Score: 85.9 bits (211), Expect = 4.110e-16 Identity = 64/158 (40.51%), Postives = 86/158 (54.43%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAPELDAAEVARHARWASGSPGRALELVGQRRGEMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLE 483 E YR V++RDA+ MN AQNALLKTLEEP +L LV + LL+T SR + L + AI+ A + A W G+PGR LELV + + LA +L G+ P +G L EL+ GKT +A+AR R+R VL++ LE Sbjct: 135 EGGYRVVIVRDAELMNAAAQNALLKTLEEPAARVVLALVTSRPRQLLETVRSRCVALSCAPLAQDEMEAILGDLAAGGE--RRAELMSWGRGAPGRVLELVARDMLTVRGHLAALLAGEAEPAESGRCLRELEGDFGGKTATAQARERLRAVLEVGLE 290
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A518BKA8_9BACT (DNA polymerase III subunit tau n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BKA8_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 5.150e-15 Identity = 70/178 (39.33%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVAREAPE------LDAAEVARHARWASGSPGRALELVGQRRGEMVALLARVLTGDLGPMAAGLALSELDLQLPGKTESAKARARVRWVLDLLLEWQLDLARLASGVPP 525 E R VL+R+A+R+N AQNALLKTLEEP GT L+L A+ LL T SRV VR L T A++A A + LD E+A AR G+PG L L ++A +L G +AA A+ E+D + G T A+ R RVR L+LL + R+A+ P Sbjct: 128 EGANRVVLVREAERLNLPAQNALLKTLEEPSAGTFLLLEASRPDSLLPTIRSRVLEVRLGALSDADTEAVLAASAADDEALAGLDLIELAVLAR---GAPGEVLRLARTGALALLAAATPLLEGRGDALAAAAAVWEVDGEYQGGTALARDRGRVRLTLELLRDVLAGALRVAATGDP 302
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Match: A0A7C3ISL9_9BACT (DNA polymerase III subunit delta n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3ISL9_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 8.280e-15 Identity = 87/221 (39.37%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 10 EAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLDTTTSRVTRVRFEHLDLETTAAIVARE---APELDAAEVARHARWASGSPGRALELVGQRRGEMV-ALLARVLTGDLGPMAAGLALSEL-DLQLPGKTESAKARARVRWVLDLL-LEWQLDLARLASGVPPDALAAGP--ELAAALAGRDAAWTARLDHVRGTIERARRDLDQN 648 E Y+ ++ DADRM AQN LLKTLEEP P +LL+L+A +DT SR VRF L I+ AP L A AR A GSPG+AL G E LLAR+ D+ P L EL DL A AR R++ VLDL+ L W+ DL +G P + LA G E AAL+GR AR + R R D + N Sbjct: 114 EGRYKVFVVTDADRMTEEAQNCLLKTLEEPPPNSLLLLIACRLEPFVDTVVSRCQIVRFRPLSASAVERILLEGHGVAPTLARAL----ARLAQGSPGQALRCHGDGSFEAARGLLARL--ADMQPGEEFLVAGELLDLGREDGASLADARERLKPVLDLVGLAWR-DLWLRVTGQPEELLAWGDACEAVAALSGRLRPAAARNLAALAQVTRDRLDANAN 327 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103622.774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103622.774.1 >prot_M-pyrifera_M_contig103622.774.1 ID=prot_M-pyrifera_M_contig103622.774.1|Name=mRNA_M-pyrifera_M_contig103622.774.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp KRQEAPYRAVLLRDADRMNPNAQNALLKTLEEPRPGTLLVLVATSATGLLback to top mRNA from alignment at M-pyrifera_M_contig103622:3..650+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103622.774.1 ID=mRNA_M-pyrifera_M_contig103622.774.1|Name=mRNA_M-pyrifera_M_contig103622.774.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103622:3..650+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103622:3..650+ >mRNA_M-pyrifera_M_contig103622.774.1 ID=mRNA_M-pyrifera_M_contig103622.774.1|Name=mRNA_M-pyrifera_M_contig103622.774.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103622:3..650+ (Macrocystis pyrifera P11B4 male)back to top |