mRNA_M-pyrifera_M_contig103613.769.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103613.769.1
Unique NamemRNA_M-pyrifera_M_contig103613.769.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: A0A3P7PJP0_DRAME (Protein phosphatase methylesterase 1 n=2 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A3P7PJP0_DRAME)

HSP 1 Score: 112 bits (281), Expect = 2.350e-28
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 1
Query:    4 LRAEGDHFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHED 234
            ++   +H++WR NL+ ++PHW GWF GLSK FL+C VPK L+LAGTDRLDT+LTV QMQGK+Q  +LP+ GH I ED
Sbjct:  236 VKKVDEHYIWRINLLKTQPHWTGWFKGLSKRFLSCNVPKLLILAGTDRLDTDLTVGQMQGKFQNTILPKTGHAIQED 312          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: A0A0D2N4D8_9CHLO (Protein phosphatase methylesterase-1 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N4D8_9CHLO)

HSP 1 Score: 107 bits (266), Expect = 2.020e-27
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 1
Query:   16 GDHFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHED 234
            GD + WR+ L  SEPHW+GW++GLS  FL  PVPK L+LAGTDRLD ELT+ QMQGK+QL+L+P AGH I ED
Sbjct:   64 GDGWRWRTPLELSEPHWEGWYSGLSTLFLGLPVPKMLLLAGTDRLDRELTIGQMQGKFQLVLMPTAGHAIQED 136          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: A0A7R9YTU1_9CHLO (Protein phosphatase methylesterase-1 n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YTU1_9CHLO)

HSP 1 Score: 107 bits (267), Expect = 3.210e-27
Identity = 47/71 (66.20%), Postives = 57/71 (80.28%), Query Frame = 1
Query:   22 HFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHED 234
            H+VWR+ L+ S+P W+GW+ GLS  FLA PVPK L+LAGTDRLD  LT+ QMQGK+QL LLP AGH +HED
Sbjct:   85 HWVWRTPLLASQPCWRGWYEGLSDVFLALPVPKLLMLAGTDRLDKPLTIGQMQGKFQLALLPMAGHAVHED 155          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: UPI0003F05B63 (protein phosphatase methylesterase 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F05B63)

HSP 1 Score: 107 bits (267), Expect = 4.140e-27
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
Query:    7 RAEGDHFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHEDVSQ 243
            +   DH+ WR +L  +E HW+GWF GLS  FL+C VPK LVLAG +RLD ELT+ QMQGK+Q+ +LPQ GH +HED  +
Sbjct:  126 KGNKDHYTWRIDLSRTEKHWQGWFKGLSCLFLSCDVPKILVLAGVNRLDRELTIGQMQGKFQMQVLPQCGHSVHEDAPE 204          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: UPI0014255EFD (protein phosphatase methylesterase 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255EFD)

HSP 1 Score: 110 bits (274), Expect = 6.920e-27
Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 1
Query:    7 RAEGDHFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHEDVSQ 243
            +++   + WR NL ++E +W+GWF GLS+ FL+CPVPK L+LAG DRLD  LTV QMQGK+Q+L+LPQ GH +HED  Q
Sbjct:  293 KSQDSVYTWRVNLANTEQYWRGWFEGLSELFLSCPVPKLLLLAGVDRLDRALTVGQMQGKFQMLILPQCGHAVHEDQPQ 371          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: A0A7R8VF71_TIMDO (Protein phosphatase methylesterase-1 (Fragment) n=1 Tax=Timema douglasi TaxID=61478 RepID=A0A7R8VF71_TIMDO)

HSP 1 Score: 107 bits (266), Expect = 7.640e-27
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 1
Query:   25 FVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHEDVSQ 243
            + WR NL  +E HW+GWFTGLS  FL C VPK L+LAG DRLD +LTV QMQGK+Q+ +LPQ GH +HEDV +
Sbjct:  134 YTWRINLGQTEEHWRGWFTGLSNEFLNCQVPKMLLLAGIDRLDKDLTVGQMQGKFQMQVLPQCGHAVHEDVPE 206          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: E1ZKQ4_CHLVA (Protein phosphatase methylesterase-1 (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZKQ4_CHLVA)

HSP 1 Score: 105 bits (261), Expect = 1.440e-26
Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 1
Query:    1 MLRAE--GDHFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHED 234
            MLR E  G  +VWR+ L  S P W+GW+ GLS  FL  PVPK LVL GTDRLD  LT+ QMQGK+Q +LLPQAGH +HED
Sbjct:   83 MLRQEAAGGGWVWRTQLERSAPFWEGWYAGLSDMFLKLPVPKVLVLVGTDRLDRPLTIGQMQGKFQPVLLPQAGHAVHED 162          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: A0A2G9UJ62_TELCI (Protein phosphatase methylesterase-1 n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9UJ62_TELCI)

HSP 1 Score: 103 bits (257), Expect = 1.570e-26
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 1
Query:    4 LRAEGDHFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHED 234
            + A G  + WR NL+ +EP W GWF GLS  FL+C  PK LVLAG DRLD +LT+AQMQGK+Q  +LP+ GH +HED
Sbjct:   32 MEALGGMYTWRINLMDTEPFWVGWFQGLSAKFLSCTPPKLLVLAGVDRLDKDLTIAQMQGKFQNTILPKVGHAVHED 108          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: A0A179I1A3_CORDF (Protein phosphatase methylesterase 1 n=1 Tax=Cordyceps confragosa TaxID=2714763 RepID=A0A179I1A3_CORDF)

HSP 1 Score: 106 bits (265), Expect = 1.970e-26
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1
Query:   31 WRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHEDVSQ 243
            WR+NL  ++P W+GWF GLSK FLA P  K L+LAGTDRLDTELT+ QMQGKY L + P+AGH+IHED+ +
Sbjct:  170 WRTNLAATQPFWEGWFVGLSKKFLAAPGGKLLLLAGTDRLDTELTIGQMQGKYNLQVFPEAGHFIHEDMPE 240          
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Match: A0A6A4WY52_AMPAM (Protein phosphatase methylesterase-1 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WY52_AMPAM)

HSP 1 Score: 102 bits (253), Expect = 2.070e-26
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = 1
Query:   25 FVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRLDTELTVAQMQGKYQLLLLPQAGHYIHEDV 237
            + WR +L  +EPHW+GWF GLS  FL+ P PK L+LAG DRLD EL+V QMQGK+Q+ ++P++GH +HEDV
Sbjct:   12 YTWRIDLASTEPHWQGWFRGLSPLFLSAPAPKVLLLAGIDRLDRELSVGQMQGKFQIQVVPRSGHVVHEDV 82          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103613.769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3P7PJP0_DRAME2.350e-2861.04Protein phosphatase methylesterase 1 n=2 Tax=Dracu... [more]
A0A0D2N4D8_9CHLO2.020e-2765.75Protein phosphatase methylesterase-1 n=1 Tax=Monor... [more]
A0A7R9YTU1_9CHLO3.210e-2766.20Protein phosphatase methylesterase-1 n=1 Tax=Chlam... [more]
UPI0003F05B634.140e-2756.96protein phosphatase methylesterase 1-like n=1 Tax=... [more]
UPI0014255EFD6.920e-2758.23protein phosphatase methylesterase 1-like n=1 Tax=... [more]
A0A7R8VF71_TIMDO7.640e-2763.01Protein phosphatase methylesterase-1 (Fragment) n=... [more]
E1ZKQ4_CHLVA1.440e-2662.50Protein phosphatase methylesterase-1 (Fragment) n=... [more]
A0A2G9UJ62_TELCI1.570e-2658.44Protein phosphatase methylesterase-1 n=1 Tax=Telad... [more]
A0A179I1A3_CORDF1.970e-2664.79Protein phosphatase methylesterase 1 n=1 Tax=Cordy... [more]
A0A6A4WY52_AMPAM2.070e-2659.15Protein phosphatase methylesterase-1 n=1 Tax=Amphi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103613contigM-pyrifera_M_contig103613:347..645 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score109.0
Seed ortholog evalue1.1e-21
Seed eggNOG ortholog10224.XP_006815441.1
Preferred namePPME1
KEGG koko:K13617
Hectar predicted targeting categoryother localisation
GOsGO:0000086,GO:0000278,GO:0002028,GO:0003674,GO:0003824,GO:0004857,GO:0004864,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006464,GO:0006482,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008214,GO:0009892,GO:0009987,GO:0010563,GO:0010605,GO:0010921,GO:0010923,GO:0010959,GO:0016787,GO:0016788,GO:0019208,GO:0019212,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0022402,GO:0030234,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032515,GO:0032879,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043412,GO:0043666,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0045936,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051049,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0051721,GO:0051722,GO:0051723,GO:0052689,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070988,GO:0071704,GO:0080090,GO:0098772,GO:0140096,GO:1901564,GO:1903047
EggNOG free text desc.protein C-terminal methylesterase activity
EggNOG OGs38CHN@33154,3BGQY@33208,3CUPF@33213,COG0596@1,KOG2564@2759
EC3.1.1.89
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons2
Model size243
Cds size243
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815542.1768434-CDS-M-pyrifera_M_contig103613:346..5191622815542.1768434-CDS-M-pyrifera_M_contig103613:346..519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103613 347..519 -
1692277456.2057323-CDS-M-pyrifera_M_contig103613:346..5191692277456.2057323-CDS-M-pyrifera_M_contig103613:346..519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103613 347..519 -
1622815542.1880848-CDS-M-pyrifera_M_contig103613:575..6451622815542.1880848-CDS-M-pyrifera_M_contig103613:575..645Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103613 576..645 -
1692277456.215796-CDS-M-pyrifera_M_contig103613:575..6451692277456.215796-CDS-M-pyrifera_M_contig103613:575..645Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103613 576..645 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103613.769.1prot_M-pyrifera_M_contig103613.769.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103613 347..645 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103613.769.1

>prot_M-pyrifera_M_contig103613.769.1 ID=prot_M-pyrifera_M_contig103613.769.1|Name=mRNA_M-pyrifera_M_contig103613.769.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
MLRAEGDHFVWRSNLVHSEPHWKGWFTGLSKAFLACPVPKFLVLAGTDRL
DTELTVAQMQGKYQLLLLPQAGHYIHEDVSQ
back to top

mRNA from alignment at M-pyrifera_M_contig103613:347..645-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103613.769.1 ID=mRNA_M-pyrifera_M_contig103613.769.1|Name=mRNA_M-pyrifera_M_contig103613.769.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=299bp|location=Sequence derived from alignment at M-pyrifera_M_contig103613:347..645- (Macrocystis pyrifera P11B4 male)
ATGCTGAGAGCCGAAGGTGATCACTTCGTGTGGAGATCGAATCTTGTACA CTCTGAACCTCACTGGAAGGGTATTGGTCACTCTAAGTACCGCCTATTCA CTCCACTCAGGCTGACCTGTGCCCAGGATGGTTCACAGGGCTATCGAAGG CATTCCTGGCGTGCCCTGTTCCAAAGTTCCTCGTCTTGGCAGGCACTGAC CGTCTGGATACGGAACTCACTGTTGCCCAGATGCAGGGGAAGTACCAGCT CCTGCTTCTGCCCCAAGCTGGGCATTACATCCACGAAGACGTGAGCCAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig103613:347..645-

>mRNA_M-pyrifera_M_contig103613.769.1 ID=mRNA_M-pyrifera_M_contig103613.769.1|Name=mRNA_M-pyrifera_M_contig103613.769.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig103613:347..645- (Macrocystis pyrifera P11B4 male)
ATGCTGAGAGCCGAAGGTGATCACTTCGTGTGGAGATCGAATCTTGTACA
CTCTGAACCTCACTGGAAGGATGCTGAGAGCCGAAGGTGATCACTTCGTG
TGGAGATCGAATCTTGTACACTCTGAACCTCACTGGAAGGGATGGTTCAC
AGGGCTATCGAAGGCATTCCTGGCGTGCCCTGTTCCAAAGTTCCTCGTCT
TGGCAGGCACTGACCGTCTGGATACGGAACTCACTGTTGCCCAGATGCAG
GGGAAGTACCAGCTCCTGCTTCTGCCCCAAGCTGGGCATTACATCCACGA
AGACGTGAGCCAAGATGGTTCACAGGGCTATCGAAGGCATTCCTGGCGTG
CCCTGTTCCAAAGTTCCTCGTCTTGGCAGGCACTGACCGTCTGGATACGG
AACTCACTGTTGCCCAGATGCAGGGGAAGTACCAGCTCCTGCTTCTGCCC
CAAGCTGGGCATTACATCCACGAAGACGTGAGCCAA
back to top