mRNA_M-pyrifera_M_contig100333.76.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A0A0N4WLC1_HAEPC (26S proteasome non-ATPase regulatory subunit 4 n=1 Tax=Haemonchus placei TaxID=6290 RepID=A0A0N4WLC1_HAEPC) HSP 1 Score: 111 bits (277), Expect = 1.850e-25 Identity = 68/161 (42.24%), Postives = 97/161 (60.25%), Query Frame = 1 Query: 1 YSLDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLL---KYGKRYVGIG-GGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTD-AQFRKLGASLRRENV 468 +S+D SEWMRNGDF PTRL Q DAA L+ KL ANPE++VGLL KYG +GI ++G+S + R V+ TQ + F LH L+P G N ++AI++A LALKHR ++ R+++F+GSP++ D A+ K+ L++E V Sbjct: 307 FSVDNSEWMRNGDFVPTRLQCQQDAANLILQCKLRANPENAVGLLSMAKYGFHLIGIALFFLIGLS---------EFPLRQVQVLSTMTQEAGRLFMKLHQLEPQGICNFMSAIKIAHLALKHRQNRNHKMRIVMFIGSPIDNLDSAELTKIAKKLKKEKV 458
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A0A3S8NV08_HALDU (26S proteasome non-ATPase regulatory subunit 4 (Fragment) n=1 Tax=Halisarca dujardinii TaxID=2583056 RepID=A0A3S8NV08_HALDU) HSP 1 Score: 107 bits (267), Expect = 8.860e-25 Identity = 62/156 (39.74%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 1 YSLDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 + +D SEWMRNGDF PTRLDAQ DA + C KL NPE+++GL+ +L D H ++ +T L+ L H LQP G N ++ IR+A L LKHR KH R+++FV SPVEG Q +L L++E V Sbjct: 8 FCVDNSEWMRNGDFIPTRLDAQSDAISMTCKAKLRQNPENTIGLM-----------------------SLADNH----VLATLTTDLNTVITSLRH-LQPKGSINFISGIRIAQLVLKHRQNKHQKMRIMIFVASPVEGEQKQLERLAKRLKKEKV 135
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A0A0K0D138_ANGCA (26S proteasome non-ATPase regulatory subunit 4 n=4 Tax=Strongylida TaxID=6308 RepID=A0A0K0D138_ANGCA) HSP 1 Score: 106 bits (265), Expect = 1.230e-24 Identity = 64/155 (41.29%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 7 LDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTD-AQFRKLGASLRRENV 468 +D SEWMRNGDF PTRL Q DAA L+ KL ANPE++VGLL + N V V S TQ S F LH L+P GH N ++AI++A LALKHR ++ R+++F+GSP++ D A+ K+ L++E V Sbjct: 10 VDNSEWMRNGDFVPTRLQCQQDAANLILQCKLRANPENAVGLLS--------------------MANQVQVLST-------MTQESGRLFMKLHQLEPQGHCNFMSAIKIAHLALKHRQNRNHKMRIVIFIGSPIDDLDSAELTKIAKKLKKEKV 137
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A0A0P1B661_PLAHL (Multiubiquitin chain binding protein mbp1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B661_PLAHL) HSP 1 Score: 104 bits (260), Expect = 5.000e-24 Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 7 LDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 LD SEWMRNGD+ P+RL+AQ DAA LLC K ANPES+VG+L + G SV+ V+ T T +HG++ GG + AI+VA LALKHR K RV+VF+GSP+E + Q K+G L++ N+ Sbjct: 10 LDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLA-----------MAGKSVQ---------------VLASPTDNMGTLLSAIHGVKIGGSMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNI 137
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A0A0W8DJJ6_PHYNI (VWFA domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJJ6_PHYNI) HSP 1 Score: 102 bits (254), Expect = 6.030e-24 Identity = 63/154 (40.91%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 7 LDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 LD SEWMRNGD+ P+RL+AQ DAA LLC K ANPES+VG+L + G SV+ V+ T T +H ++ GG + AI+VA LALKHR K RV+VF+GSP+E + Q K+G L++ N+ Sbjct: 10 LDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLA-----------MAGKSVQ---------------VLASPTDNMGTLLSAIHRIKIGGSMKLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNI 137
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A0A0D8XK32_DICVI (26S proteasome non-ATPase regulatory subunit 4 n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8XK32_DICVI) HSP 1 Score: 106 bits (264), Expect = 1.020e-23 Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 7 LDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 +D SEWMRNGDF PTRL Q DAA L+ KL ANPE++VGLL + N V V S TQ S F LH L+P GH N ++AI++A LALKHR ++ R+++F+GSP+E D+ K+ L++E V Sbjct: 307 VDNSEWMRNGDFVPTRLQCQQDAANLILQCKLRANPENAVGLLS--------------------MANQVQVLST-------MTQESGRLFMKLHQLEPQGHCNFMSAIKIAHLALKHRQNRNHKMRIVIFIGSPIENLDS-LTKIAKKLKKEKV 432
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: H3GZU7_PHYRM (VWFA domain-containing protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3GZU7_PHYRM) HSP 1 Score: 103 bits (258), Expect = 1.300e-23 Identity = 63/154 (40.91%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 7 LDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 LD SEWMRNGD+ P+RL+AQ DAA LLC K ANPES+VG+L + G S++ V+ T T +H +Q GG + AI+VA LALKHR K RV+VF+GSP+E + Q K+G L++ N+ Sbjct: 10 LDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLA-----------MAGKSIQ---------------VLASPTDNMGTLLSAIHRVQIGGSMKLANAIQVAQLALKHRSNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNI 137
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: T1G3M6_HELRO (26S proteasome non-ATPase regulatory subunit 4 n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G3M6_HELRO) HSP 1 Score: 104 bits (259), Expect = 1.310e-23 Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = 1 Query: 4 SLDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 S+D S++MRNGDF PTRL AQ DA L+C+ K +NPE++VGL+ SRN+ V++ T LH L+P G N ++ IRVA L LKHR K+ R+I F+GSP+E ++ + KLG LR+E V Sbjct: 5 SVDSSDYMRNGDFLPTRLHAQQDAVNLVCHSKTRSNPENNVGLITL---------------------------SRNTEVLVTLTSDVAKLLAKLHQLRPKGDINFVSGIRVAHLVLKHRQGKNHKMRIIAFIGSPIEDSEKELVKLGKKLRKEKV 132
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A9V9X9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9X9_MONBE) HSP 1 Score: 103 bits (257), Expect = 3.360e-23 Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 7 LDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 LD SE+MRNGDFSPTRL AQ DA +LC K+ +PE+SVGL+ +R V +V ++ P H +QP G + ++A++VA L LKHR K R++VF+GSP++ +AQ KLG L++ N+ Sbjct: 9 LDDSEYMRNGDFSPTRLAAQKDACNMLCGSKIREHPENSVGLMTMAQRRV---------------------------LVTLASDQGPL-LAAAHNVQPKGQIDFMSAVQVAQLVLKHRQAKQHRQRIVVFIGSPIDADEAQMIKLGKKLKKSNI 134
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Match: A0A1B6EXY7_9HEMI (VWFA domain-containing protein (Fragment) n=5 Tax=Proconiini TaxID=565685 RepID=A0A1B6EXY7_9HEMI) HSP 1 Score: 99.4 bits (246), Expect = 4.010e-23 Identity = 60/154 (38.96%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 7 LDVSEWMRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVVGISVREKVENLVDVHSRNSIVVIFSTQLSPTPFFLLHGLQPGGHGNVLAAIRVATLALKHRGMKHAHPRVIVFVGSPVEGTDAQFRKLGASLRRENV 468 +D S++MRNGDF PTRL AQ+DA ++C+ K +NPE++VGLL VE L + S V+ LH +QP G+ N+L IR+A LALKHR K+ R++ FVGSPVE + + KL L++E V Sbjct: 10 VDNSDYMRNGDFLPTRLQAQLDAVNIVCHSKTRSNPENNVGLLTLAN-----------------VEVLATLTSDTGRVIS-----------KLHQVQPEGNINLLTGIRIAHLALKHRQGKNHKMRIVAFVGSPVETEEKELVKLAKRLKKEKV 135 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100333.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100333.76.1 >prot_M-pyrifera_M_contig100333.76.1 ID=prot_M-pyrifera_M_contig100333.76.1|Name=mRNA_M-pyrifera_M_contig100333.76.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp MRNGDFSPTRLDAQVDAARLLCYGKLNANPESSVGLLKYGKRYVGIGGGVback to top mRNA from alignment at M-pyrifera_M_contig100333:5..534- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100333.76.1 ID=mRNA_M-pyrifera_M_contig100333.76.1|Name=mRNA_M-pyrifera_M_contig100333.76.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=530bp|location=Sequence derived from alignment at M-pyrifera_M_contig100333:5..534- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100333:5..534- >mRNA_M-pyrifera_M_contig100333.76.1 ID=mRNA_M-pyrifera_M_contig100333.76.1|Name=mRNA_M-pyrifera_M_contig100333.76.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig100333:5..534- (Macrocystis pyrifera P11B4 male)back to top |