mRNA_M-pyrifera_M_contig100319.75.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A517WJF3_9PLAN (Mechanosensitive channel MscK n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WJF3_9PLAN) HSP 1 Score: 422 bits (1085), Expect = 2.420e-136 Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 1 Query: 1 QAAEARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLGKAEFTKSYDALASF 678 QAAEARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDF+SVKQKIEVYGMTPTIGLLLRNRRDHLP IEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLGKAEFTKSYDALASF Sbjct: 384 QAAEARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFKSVKQKIEVYGMTPTIGLLLRNRRDHLPTIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLGKAEFTKSYDALASF 609
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A2N1PQZ2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PQZ2_9BACT) HSP 1 Score: 101 bits (251), Expect = 5.720e-21 Identity = 65/235 (27.66%), Postives = 127/235 (54.04%), Query Frame = 1 Query: 1 QAAEARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEK----------LTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLGKAEFTKSYDALAS 675 +A EA A+ A+PAV + A++N LAE RT GP G ++E LTK++E+F+S+K +I G T IG+LLR +R +P + ++ + + + Q+ L+EL+ S L + + +I + +++ ++ + ++ +++ + R+ ++SLI DY+ Y + +++ + R+L+ E ++Y S+IDE+ILW+ S L + ++ A+ S Sbjct: 281 KAREALKDAAYANPAVTKLAQENARLAELRT----------GPQGLAARIEESSKRQDQVSKLLTKVRENFKSIKDRIRATGFTNAIGILLRVKRAEIPNVSEFRRSMNRRKNNISFVQLQLIELDEKMSALANMDLSISSAISEVNKNTPEEQLNLIKTNIKDTLTTRKGLIESLISDYNAYFVRMVDVDSLERQLVSEISTYTSFIDERILWVQSCQPLRYYDLPRATKAIGS 505
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A3M2CEE4_9BACT (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A3M2CEE4_9BACT) HSP 1 Score: 99.4 bits (246), Expect = 2.630e-20 Identity = 64/222 (28.83%), Postives = 118/222 (53.15%), Query Frame = 1 Query: 28 SNAHPAVREYAEKNVLLAESRT-------KLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLV-DLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLGKAEFTKSYDAL 669 +NAHP V+ +AE+ LA RT KL +S E V + +L+E F ++K+++E G + IG L+R +RD LP I ++ I ++ ++ + Q+ LLELE R ++ EK + + L DL ++ P +++ VREL++ RR L +L+ D + L +L+ +L ++ Y +++E+I W+ S +G +F ++ + + Sbjct: 286 ANAHPLVKAFAEETERLARRRTGPDGSTAKLARSSEAVD-------QANAQRERLREQFATLKKRLEAAGNSDAIGQLMRRQRDELPDIREIERAIAKTKADISSVQLELLELEGQRLEIPQAEKKLREALATDL-----KLSPSEVDTAVRELVQTRRTMLAALLSDLNALFSKLVDLQTAETQLYKQVREYAEFLEERIFWVRSTKPIGLTDFRRAGEGI 495
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A2A2W2W3_9BACT (Potassium transporter KefA n=4 Tax=Planctomycetes TaxID=203682 RepID=A0A2A2W2W3_9BACT) HSP 1 Score: 97.8 bits (242), Expect = 9.010e-20 Identity = 66/213 (30.99%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 13 ARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQ------LEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQL 633 A+ A A P++R +AE+N +LAE ++ S+ V E+L K F++ K K+E+ G+T ++G LLR +R LP + K + + + AQ L E +++R + D E I + + HP L+ +EL+ +++YLD+LI + Y D L L+ R++I T Y +YIDE++LWI SA L Sbjct: 304 AKLEAIEAAPSLRAFAEQNQVLAEIAKRVADSLATAEQDLKASTEVHERLAK---QFKTTKNKVELVGLTSSVGALLRKQRSSLPDVRQRKTAVANRQTLINDAQYELFEYDDERQAIADTESCIAEMIK---------HPTSGRDITVLKSAAQELLARKQEYLDALIRTSNQYFDALVELDFEDRQIITLTAEYENYIDERVLWIRSARFL 504
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A4P7C1P9_9GAMM (Mechanosensitive ion channel n=2 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=A0A4P7C1P9_9GAMM) HSP 1 Score: 97.1 bits (240), Expect = 1.650e-19 Identity = 62/218 (28.44%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 4 AAEARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHP-------QQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLG 636 AA A A+ HPA++E AE+N L++ T L + V+ + + +L ++K+DF S +Q++E+ G+ + +LR++R LP + +++ ++EM + L ++ R QL + + Q + ++QV P ++++ V L+KDR+ LD L Y + L+ V R+L++ Y +++DE +LWIPSA+ LG Sbjct: 277 AARAEQEAAGKHPAIQELAEQNARLSKGLTSLVAHLGRVTAKRE---AAEAQLKQIKQDFNSAQQRLEIAGLNRALQQILRDQRRSLPDLSHYQEETEQYQEEMAEVGLNQLRVDEQRRQLSKLNEAVTQVM------AEQVEPGLLAYQREEIKAEVSNLLKDRKNLLDKLSATQTQYLRLIGELDFVQRQLMDTVKQYSTFLDEHLLWIPSASPLG 485
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A2E7EN51_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7EN51_9PLAN) HSP 1 Score: 95.1 bits (235), Expect = 7.650e-19 Identity = 66/219 (30.14%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 13 ARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLGKAEFTKSYDAL 669 AR A NAHP +RE AE+N +L S+ +++ LK +E + T+GL+L+ +R LP QRI F E E+ A + + + S L D + ++ L ++ D H Q LE L+ +R L L D Y + L+ LE+ +R+LI +T + ++IDE +LWI SA++ GKAE + + L Sbjct: 303 ARREAENAHPNLRELAERNTVLXXXXXXXXXXXXXXLAEN---TSLVKRIDALKNASRKASDSVEKASHSTTVGLMLQKQRSELPDTHACYQRIYFVENELPAVHLEEMAYAEEASSLVDLKIAADKVLSEMTSAPDDPHQQLLESTALSLLTTQRDLLYKLEKDLKEYVNRLTKLEIGNRQLIRQTNDFSTFIDEHVLWIRSADRFGKAELAATGEGL 518
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A5M6CV22_9BACT (Mechanosensitive ion channel n=1 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6CV22_9BACT) HSP 1 Score: 94.0 bits (232), Expect = 1.910e-18 Identity = 61/207 (29.47%), Postives = 107/207 (51.69%), Query Frame = 1 Query: 13 ARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQL 633 AR A A PA++ YA++N LAE ++++ + + ++L + F +QK+E+ G+T ++G LLR +R LP + + + + + Q L E E++R +LGD + +E+ + + + + LE REL+ + YLD+LI + Y D L L+ R++I +Y +YIDE++LWI S L Sbjct: 276 ARREAIAADPALQRYADRNQELAEKAKEISQKLAETEKDLKLATEMHDELNR---QFNGTRQKVELVGLTSSVGALLRKQRTTLPDVSQRETAVAQRQAVISDMQYLLFEYEDERQELGDIDALVEKISHESALQGNN-DSELLESATRELLTHKSGYLDALIRNSGQYFDTLVELDTTDRQVIALAGNYANYIDERVLWIRSGRAL 478
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: D5C235_NITHN (MscS Mechanosensitive ion channel n=1 Tax=Nitrosococcus halophilus (strain Nc4) TaxID=472759 RepID=D5C235_NITHN) HSP 1 Score: 94.0 bits (232), Expect = 1.910e-18 Identity = 59/203 (29.06%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 37 HPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKI---VRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQLG 636 HPA++ AE+N L++ L ++ + + +L ++++DF+S +Q++E+ G+ + +LR++R LP + ++Q SE+EM + L ++ R Q ++ Q + + + P Q E+I VR L++DR+ LD L Y + L+ V R+LIE Y +++DE +LWIPSA+ LG Sbjct: 293 HPAIQALAEQNAQLSKELASLAANLSRMRAKHAV---AEAQLKQMQQDFQSTQQRLEIAGLNKALQQILRDQRRSLPDLSHYRQEAEQSEEEMAEVGLNQLRIDEQRRQFSKLDEAATQVMAERVEPG--LLPYQREEIKAEVRNLLRDRKDLLDKLSATQTQYLRVIGELDFVQRQLIETVKQYSTFLDEHLLWIPSASPLG 490
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A5C6DYT3_9BACT (Miniconductance mechanosensitive channel MscM n=2 Tax=Novipirellula aureliae TaxID=2527966 RepID=A0A5C6DYT3_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 2.590e-18 Identity = 61/207 (29.47%), Postives = 108/207 (52.17%), Query Frame = 1 Query: 13 ARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQL 633 AR A A PA++ YAE+N LAE ++T+ + + V E L F + K+++ G+T ++G LLR +R LP + ++ + + + Q LLE E+ RS++ + +K + T+V+ + LE +EL+ + +YLD+LI + Y + L+L +++I++ Y +YIDE++LWI S L Sbjct: 260 ARYEAIAAAPALQAYAEQNQELAEKAKRVTEDLAAAQRDLKSAVEVHEALVN---QFRVTRNKVDLVGLTSSVGTLLRKQRTSLPDVSERREAVAMRQPLINDIQYELLEYEDLRSEVAEPQKLLA-TIVEDSGSIGSLDQALLESAAQELLSRKGEYLDTLIRNSSQYFHAMIELDLTDQQIIKQAAEYENYIDERVLWIRSGRSL 462
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Match: A0A5B9M7E3_9BACT (Miniconductance mechanosensitive channel MscM n=1 Tax=Stieleria maiorica TaxID=2795974 RepID=A0A5B9M7E3_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 2.600e-18 Identity = 61/198 (30.81%), Postives = 103/198 (52.02%), Query Frame = 1 Query: 40 PAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVQEKLTKLKEDFESVKQKIEVYGMTPTIGLLLRNRRDHLPAIEIHKQRIVFSEQEMQAAQVALLELENDRSQLGDYEKTIEQTLVDLDVDSDQVHPQQLEKIVRELIKDRRQYLDSLILDYHTYHDNLSNLELVSRELIEETTSYRSYIDEQILWIPSANQL 633 P++R +AE+N LAES ++ S+ EKL K F++ ++K+++ G+T ++G LLR +R LP + K + + + AQ L E +++R + D E I + + D L +EL+ +++YLD+LI + Y D L L+ R++I+ T Y +YIDE++LWI SA L Sbjct: 286 PSLRAFAEQNQALAESAKRVADSLATAEQELKAATEAHEKLAK---QFKTTQKKVDLVGLTSSVGALLRKQRSTLPDMRQRKIDVADRQTLINDAQYELFEYDDERQAIADTESCIAEMIQQSTNGRDTAV---LRSAAQELLARKQEYLDALIRTSNQYFDALVELDFEDRQIIKLTAEYENYIDERVLWIRSARFL 477 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100319.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100319.75.1 >prot_M-pyrifera_M_contig100319.75.1 ID=prot_M-pyrifera_M_contig100319.75.1|Name=mRNA_M-pyrifera_M_contig100319.75.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp QAAEARTAASNAHPAVREYAEKNVLLAESRTKLTKSIELVSGPAGYLLSVback to top mRNA from alignment at M-pyrifera_M_contig100319:2..679+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100319.75.1 ID=mRNA_M-pyrifera_M_contig100319.75.1|Name=mRNA_M-pyrifera_M_contig100319.75.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig100319:2..679+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100319:2..679+ >mRNA_M-pyrifera_M_contig100319.75.1 ID=mRNA_M-pyrifera_M_contig100319.75.1|Name=mRNA_M-pyrifera_M_contig100319.75.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig100319:2..679+ (Macrocystis pyrifera P11B4 male)back to top |