mRNA_M-pyrifera_M_contig103507.747.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103507.747.1
Unique NamemRNA_M-pyrifera_M_contig103507.747.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: A0A3Q1JT85_ANATE (Regulator of G-protein signaling 8 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1JT85_ANATE)

HSP 1 Score: 57.8 bits (138), Expect = 4.440e-8
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 1
Query:    1 VGAILASKKQTEEFYLFLKKLHCEENLQFYHEVGQYRRAPPS-SRAAAAKNIFANFVAPGAPTEVNPDSAAR 213
            + A+LAS+     F  FL+    EENLQFY    QY+ +  + S    AKNIFA ++ PGAP EVN DS  R
Sbjct:  227 LNALLASQTGVSVFGAFLRSEFSEENLQFYLACEQYKHSSNNFSLQRRAKNIFATYIQPGAPREVNLDSKTR 298          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: UPI001A998701 (regulator of G-protein signaling 1 isoform X1 n=3 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A998701)

HSP 1 Score: 55.5 bits (132), Expect = 2.990e-7
Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 1
Query:    7 AILASKKQTEEFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAA-AKNIFANFVAPGAPTEVNPDSAAR 213
            A+LAS+     F  FL+    EENLQFY    QYR +  + R    AK+I+A ++ PGAP EVN DS  R
Sbjct:  256 ALLASQTGVSVFGAFLRSEFSEENLQFYLACEQYRHSSNNFRLQRRAKDIYATYIQPGAPREVNLDSKTR 325          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: A0A667WU02_9TELE (Regulator of G-protein signaling 8-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667WU02_9TELE)

HSP 1 Score: 54.7 bits (130), Expect = 5.450e-7
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 1
Query:   10 ILASKKQTEEFYLFLKKLHCEENLQFYHEVGQYRRAPPS-SRAAAAKNIFANFVAPGAPTEVNPDSAAR 213
            ILAS+     F  FL+    EENLQFY    QYR +  + S    AK+I+A ++ PGAP EVN DS  R
Sbjct:  219 ILASRSGVAVFGAFLRSEFSEENLQFYLACEQYRHSSNNFSLQRRAKDIYATYIQPGAPREVNLDSKTR 287          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: U5ESY4_9DIPT (Putative regulator of g-protein signaling 9 (Fragment) n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=U5ESY4_9DIPT)

HSP 1 Score: 53.5 bits (127), Expect = 1.500e-6
Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 1
Query:   34 EEFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAAAKNIFANFVAPGAPTEVNPD 201
            +EF L+LKK +  EN++F+  V + RR+  S  A   K I+  F+APGAP E+N D
Sbjct:  333 QEFTLYLKKEYSHENIRFWSAVNELRRSSQSQIARKVKEIYEEFLAPGAPCEINID 388          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: UPI0018649959 (regulator of G-protein signaling 1 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018649959)

HSP 1 Score: 52.4 bits (124), Expect = 3.630e-6
Identity = 29/72 (40.28%), Postives = 42/72 (58.33%), Query Frame = 1
Query:    1 VGAILASKKQTEEFYLFLKKLHCEENLQFYHEVGQYRRAPPS-SRAAAAKNIFANFVAPGAPTEVNPDSAAR 213
            +  +LAS+     F  FL+    EENLQFY    QYR++  + +    A++I+A ++ PGAP EVN DS  R
Sbjct:  227 LNTLLASRVGVSVFGAFLRSEFSEENLQFYLACEQYRQSSNNFTLQRRARDIYATYIQPGAPREVNLDSKTR 298          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: UPI001E1CFADD (uncharacterized protein LOC123506347 isoform X1 n=11 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CFADD)

HSP 1 Score: 52.4 bits (124), Expect = 3.840e-6
Identity = 24/55 (43.64%), Postives = 32/55 (58.18%), Query Frame = 1
Query:   37 EFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAAAKNIFANFVAPGAPTEVNPD 201
            EF  +L+K +C EN++F   V Q R  P S      KNI+  F+ PGAP E+N D
Sbjct:  363 EFAAYLRKEYCHENIRFVEAVQQLRWGPTSDMGEKVKNIYEEFLKPGAPCEINID 417          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: A0A8C3LTU4_CHRPC (Regulator of G protein signaling 21 n=1 Tax=Chrysolophus pictus TaxID=9089 RepID=A0A8C3LTU4_CHRPC)

HSP 1 Score: 49.7 bits (117), Expect = 6.660e-6
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 1
Query:    1 VGAILASKKQTEEFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAA-AKNIFANFVAPGAPTEVNPDSAAR 213
            V  +LA+K   E F  FLK    EEN++F+     +++   S++ AA A+ I+A+F+ P AP E+N D   R
Sbjct:   35 VDTLLANKDGLEAFRKFLKSEFSEENVEFWLACEDFKKTTSSTKIAAKAQKIYADFIEPDAPKEINIDFHTR 106          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: A0A8B7YVV7_ACAPL (regulator of G-protein signaling 9-like n=3 Tax=Valvatida TaxID=41166 RepID=A0A8B7YVV7_ACAPL)

HSP 1 Score: 50.8 bits (120), Expect = 1.320e-5
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 1
Query:   37 EFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAAAKNIFANFVAPGAPTEVNPD 201
            EF +FLKK + +EN++F+    Q + AP SS       I+  F+APGAP E+N D
Sbjct:  317 EFEMFLKKEYSQENIRFWQACEQLKYAPQSSVPEQVHEIYREFLAPGAPCEINVD 371          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: A0A336KFL4_CULSO (CSON006858 protein n=2 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336KFL4_CULSO)

HSP 1 Score: 49.7 bits (117), Expect = 3.440e-5
Identity = 24/56 (42.86%), Postives = 33/56 (58.93%), Query Frame = 1
Query:   34 EEFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAAAKNIFANFVAPGAPTEVNPD 201
            +EF  +LKK +  EN++F+  V   RRA  SS     K I+  F+ PGAP E+N D
Sbjct:  370 QEFTAYLKKEYSHENIRFWDAVNDLRRASASSVVKKVKEIYDEFLKPGAPCEINID 425          
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Match: UPI00193D63D6 (uncharacterized protein LOC111044830 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193D63D6)

HSP 1 Score: 48.9 bits (115), Expect = 6.470e-5
Identity = 23/65 (35.38%), Postives = 38/65 (58.46%), Query Frame = 1
Query:   10 ILASKKQTEEFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAAAKNIFANFVAPGAPTEVNPDS 204
            ++A +   +EF  +L+K +  EN++F+  V   RR+  S      + I+  F+APGAP E+N DS
Sbjct:  831 LVADQTGLQEFTNYLRKEYSHENIRFWMAVNDLRRSSQSQITTRVQEIYEEFLAPGAPCEINIDS 895          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103507.747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A3Q1JT85_ANATE4.440e-845.83Regulator of G-protein signaling 8 n=1 Tax=Anabas ... [more]
UPI001A9987012.990e-745.71regulator of G-protein signaling 1 isoform X1 n=3 ... [more]
A0A667WU02_9TELE5.450e-746.38Regulator of G-protein signaling 8-like n=1 Tax=My... [more]
U5ESY4_9DIPT1.500e-644.64Putative regulator of g-protein signaling 9 (Fragm... [more]
UPI00186499593.630e-640.28regulator of G-protein signaling 1 n=1 Tax=Megalop... [more]
UPI001E1CFADD3.840e-643.64uncharacterized protein LOC123506347 isoform X1 n=... [more]
A0A8C3LTU4_CHRPC6.660e-637.50Regulator of G protein signaling 21 n=1 Tax=Chryso... [more]
A0A8B7YVV7_ACAPL1.320e-543.64regulator of G-protein signaling 9-like n=3 Tax=Va... [more]
A0A336KFL4_CULSO3.440e-542.86CSON006858 protein n=2 Tax=Culicoides sonorensis T... [more]
UPI00193D63D66.470e-535.38uncharacterized protein LOC111044830 n=1 Tax=Nilap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103507contigM-pyrifera_M_contig103507:359..571 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size213
Cds size213
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815540.701067-CDS-M-pyrifera_M_contig103507:358..5711622815540.701067-CDS-M-pyrifera_M_contig103507:358..571Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103507 359..571 +
1692277455.531647-CDS-M-pyrifera_M_contig103507:358..5711692277455.531647-CDS-M-pyrifera_M_contig103507:358..571Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103507 359..571 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103507.747.1prot_M-pyrifera_M_contig103507.747.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103507 359..571 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103507.747.1

>prot_M-pyrifera_M_contig103507.747.1 ID=prot_M-pyrifera_M_contig103507.747.1|Name=mRNA_M-pyrifera_M_contig103507.747.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp
VGAILASKKQTEEFYLFLKKLHCEENLQFYHEVGQYRRAPPSSRAAAAKN
IFANFVAPGAPTEVNPDSAAR
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mRNA from alignment at M-pyrifera_M_contig103507:359..571+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103507.747.1 ID=mRNA_M-pyrifera_M_contig103507.747.1|Name=mRNA_M-pyrifera_M_contig103507.747.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=213bp|location=Sequence derived from alignment at M-pyrifera_M_contig103507:359..571+ (Macrocystis pyrifera P11B4 male)
GTCGGCGCGATCCTCGCCTCCAAGAAGCAGACAGAGGAGTTCTACCTCTT CCTCAAGAAGCTCCACTGCGAGGAGAACCTCCAGTTCTACCACGAGGTCG GCCAGTACCGCCGCGCCCCCCCCTCCTCCCGCGCCGCCGCCGCCAAGAAC ATCTTCGCAAACTTCGTCGCCCCCGGCGCTCCCACCGAAGTCAACCCCGA CTCTGCCGCCCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103507:359..571+

>mRNA_M-pyrifera_M_contig103507.747.1 ID=mRNA_M-pyrifera_M_contig103507.747.1|Name=mRNA_M-pyrifera_M_contig103507.747.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig103507:359..571+ (Macrocystis pyrifera P11B4 male)
GTCGGCGCGATCCTCGCCTCCAAGAAGCAGACAGAGGAGTTCTACCTCTT
CCTCAAGAAGCTCCACTGCGAGGAGAACCTCCAGTTCTACCACGAGGTCG
GCCAGTACCGCCGCGCCCCCCCCTCCTCCCGCGCCGCCGCCGCCAAGAAC
ATCTTCGCAAACTTCGTCGCCCCCGGCGCTCCCACCGAAGTCAACCCCGA
CTCTGCCGCCCGTGTCGGCGCGATCCTCGCCTCCAAGAAGCAGACAGAGG
AGTTCTACCTCTTCCTCAAGAAGCTCCACTGCGAGGAGAACCTCCAGTTC
TACCACGAGGTCGGCCAGTACCGCCGCGCCCCCCCCTCCTCCCGCGCCGC
CGCCGCCAAGAACATCTTCGCAAACTTCGTCGCCCCCGGCGCTCCCACCG
AAGTCAACCCCGACTCTGCCGCCCGT
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