mRNA_M-pyrifera_M_contig103505.746.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: A0A6L7V9V2_9BACT (Uncharacterized protein n=1 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6L7V9V2_9BACT) HSP 1 Score: 124 bits (312), Expect = 5.010e-33 Identity = 66/121 (54.55%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 91 PVILDLDGDGVEY---SEIPVLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 P++LDLDGDGVE E FD+N D + AW DDGFLA+DKDGDGQI+ DE++F SY GA+TDLEGL FD +LD +D +WS F VWQD + +G SD EL SLDE G Sbjct: 41 PIVLDLDGDGVELVPLEESTAFFDINGDGYRERMAWASADDGFLAYDKDGDGQIAAHDELSFVSYVEGARTDLEGLRHFDXXXXXQLDPDDAEWSLFRVWQDLDQDGESDPAELRSLDEEG 161
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: A0A8D5FVF4_9DELT (Uncharacterized protein n=2 Tax=Desulfomarina profundi TaxID=2772557 RepID=A0A8D5FVF4_9DELT) HSP 1 Score: 131 bits (329), Expect = 1.120e-32 Identity = 66/124 (53.23%), Postives = 84/124 (67.74%), Query Frame = 1 Query: 76 VTNIPPVILDLDGDGVEYSEIP--VLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDEL 441 V + PV+LDLDGDGVE + + FD N D + W+G DDGFL +D D D Q++Q DE++ Y+PGA TDLEGL AFDSN + + D D W++F VWQD+N NGV+D GE SSLDEL Sbjct: 349 VYHYTPVVLDLDGDGVELLNVSENIKFDWNLDGKAEATGWIGHDDGFLVYDYDHDRQVNQPDELSLRQYSPGAATDLEGLRAFDSNGDGRFDKTDTGWNDFGVWQDKNSNGVTDMGEFSSLDEL 472
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: UPI0013D69919 (FG-GAP-like repeat-containing protein n=1 Tax=Spartinivicinus ruber TaxID=2683272 RepID=UPI0013D69919) HSP 1 Score: 127 bits (320), Expect = 2.470e-31 Identity = 66/129 (51.16%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 61 TMTINVT---NIPPVILDLDGDGVEYSEI--PVLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSL 432 T TIN+ IPPV++DLDGDGVE+ + P FDV D ++AW G DD L +D++GDGQ+S E FT Y GA TDL GLH FD+NNN +LD++D+ +S F +WQD+NLNG D GE ++L Sbjct: 953 TETINIRVAPTIPPVVIDLDGDGVEFISLQTPYQFDVTGDGQANYTAWAGADDAILVYDRNGDGQVSSPLEFQFTHYLEGATTDLAGLHYFDTNNNQQLDSSDEAFSAFHLWQDRNLNGQVDTGEWNAL 1081
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: A0A7V5R705_9DELT (Tandem-95 repeat protein n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7V5R705_9DELT) HSP 1 Score: 127 bits (319), Expect = 3.290e-31 Identity = 66/120 (55.00%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 91 PVILDLDGDGVEYSEIP--VLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 PVI+DLDGDGVE I V+FD N D S W DDGFL +D + D QI++ DE+ Y PGA+TDLEGL AFDSN + ND W++F VWQD+N NG++DEGE SLDELG Sbjct: 607 PVIMDLDGDGVELLGIEEGVVFDWNRDGDAEASGWAAGDDGFLVYDYNQDAQITRADELMLREYLPGAETDLEGLRAFDSNEDGIFSGNDTSWNDFGVWQDRNSNGLTDEGEFHSLDELG 726
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: UPI0009E7D3A6 (hypothetical protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI0009E7D3A6) HSP 1 Score: 126 bits (317), Expect = 6.610e-31 Identity = 69/141 (48.94%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 37 GELYSVPFTMTINVTN--IPPVILDLDGDGVE---YSEIPVLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 G +VPF++T N +PP++LDLDGDG+E Y+ + FD+++D + WV DDGFLA D++ +G I + EI+F + A TDLEGL AFDSN N LD D ++ EF VWQD N NGVSD GEL SL E G Sbjct: 4310 GRTTAVPFSVTFMRRNSSVPPIVLDLDGDGIELVDYATSSISFDMDSDGAADRTGWVAADDGFLALDRNANGAIDDISEISFINDAANALTDLEGLRAFDSNENGLLDAGDARFGEFLVWQDANQNGVSDTGELKSLTEAG 4450
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: M1NB21_DESSD (Cadherin domain-containing protein n=2 Tax=Desulfocapsa TaxID=53318 RepID=M1NB21_DESSD) HSP 1 Score: 126 bits (316), Expect = 8.540e-31 Identity = 65/120 (54.17%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 91 PVILDLDGDGVEYSEIP--VLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 PVILDLDGDGVE I V FD N D S WV DDGFL +D + DG +++ DE+ Y PGA TDLEGL AFDSNN+ D WS+F +WQD+N NG+SDEGE +LD+ G Sbjct: 988 PVILDLDGDGVELLGIEEGVTFDWNRDTIAESSGWVAADDGFLVYDHNHDGAVTRADELMLKEYLPGATTDLEGLQAFDSNNDGIFSKEDAAWSDFGIWQDKNSNGISDEGEFKTLDDAG 1107
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: UPI001988AE4C (Tandem-95 repeat protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI001988AE4C) HSP 1 Score: 125 bits (314), Expect = 1.610e-30 Identity = 76/172 (44.19%), Postives = 108/172 (62.79%), Query Frame = 1 Query: 1 ANY---ANFDFEVHDGELYSVPFTMTINVTNIP----------------PVILDLDGDGVEYSEIP---VLFDVNAD--VGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 ANY A+F + + DG++ SV T I V ++ PV+LDLDGDG+E + I VLFD+N D + KL WVG DDG LA+D DG+G I +EI+F Y GA+TDLEGL AFDSN++ LD +D +WS+F VW+D + +G++D+GE ++L ++G Sbjct: 1252 ANYYGAASFQYTLSDGQV-SVTGTANITVNDVAEPSSGXXXXXXXXXXKPVVLDLDGDGLELTAIDEKSVLFDINDDGFLDKL--GWVGGDDGLLAYDYDGNGVIEHGNEISFAQYLDGARTDLEGLKAFDSNHDGALDGDDAEWSKFGVWRDADGDGITDQGEFNNLTDMG 1420
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: A0A7Y8JEW9_9RHOO (Cadherin_4 domain-containing protein n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7Y8JEW9_9RHOO) HSP 1 Score: 125 bits (314), Expect = 1.620e-30 Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 91 PVILDLDGDGVEYSEIP---VLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 P+ +DL+G+G E+ + V FDVN D K +AW+G+DDG LA+D DGDG+I + EI+F Y GAQ+DLEGL AFDSN + + DD+W++F VWQD N NGV+D GE +L E+G Sbjct: 286 PIAVDLNGNGFEFVNVDDSNVFFDVNGDGWKRRTAWIGKDDGLLAYDIDGDGKIDKPGEISFARYKDGAQSDLEGLRAFDSNGDGRFSALDDKWAKFGVWQDANQNGVTDPGEFRTLSEMG 406
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: UPI0012E9D762 (hypothetical protein n=1 Tax=Caldimonas manganoxidans TaxID=196015 RepID=UPI0012E9D762) HSP 1 Score: 124 bits (311), Expect = 4.180e-30 Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 91 PVILDLDGDGVEYSEIP---VLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 P+ +DL+G+G E+ + V FDVN D K +AW+G+DDG LA+D DGDG+I + EI+F Y GAQ+DLEGL AFDSN + + DD+W++F VWQD N NGV+D GE +L E+G Sbjct: 1297 PIAVDLNGNGFEFVNVDDSNVFFDVNGDGWKRRTAWIGKDDGLLAYDIDGDGKIDKPGEISFARYQDGAQSDLEGLSAFDSNGDGRFSALDDKWAKFGVWQDANGNGVTDPGEFRTLSEMG 1417
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Match: A0A7V7F2Z7_9DELT (Cadherin-like domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V7F2Z7_9DELT) HSP 1 Score: 123 bits (308), Expect = 1.050e-29 Identity = 62/121 (51.24%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 91 PVILDLDGDGVEYSEIP---VLFDVNADVGKLFSAWVGQDDGFLAFDKDGDGQISQLDEIAFTSYTPGAQTDLEGLHAFDSNNNFKLDNNDDQWSEFSVWQDQNLNGVSDEGELSSLDELG 444 P+ LDL+G+G E+ ++ V FDVN D K ++WV DG LA+D DG+G+I +EI+FT Y PGAQTDLEGL AFDSN + DD WS+F VWQD + +GV+D GE +LD++G Sbjct: 568 PIALDLNGNGFEFVDLDDSNVFFDVNGDGWKERTSWVAPGDGLLAYDADGNGKIEHAEEISFTGYKPGAQTDLEGLQAFDSNGDGFFSAADDNWSKFGVWQDADQDGVTDLGEFRTLDDMG 688 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103505.746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103505.746.1 >prot_M-pyrifera_M_contig103505.746.1 ID=prot_M-pyrifera_M_contig103505.746.1|Name=mRNA_M-pyrifera_M_contig103505.746.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp ANYANFDFEVHDGELYSVPFTMTINVTNIPPVILDLDGDGVEYSEIPVLFback to top mRNA from alignment at M-pyrifera_M_contig103505:209..652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103505.746.1 ID=mRNA_M-pyrifera_M_contig103505.746.1|Name=mRNA_M-pyrifera_M_contig103505.746.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig103505:209..652+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103505:209..652+ >mRNA_M-pyrifera_M_contig103505.746.1 ID=mRNA_M-pyrifera_M_contig103505.746.1|Name=mRNA_M-pyrifera_M_contig103505.746.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig103505:209..652+ (Macrocystis pyrifera P11B4 male)back to top |