mRNA_M-pyrifera_M_contig103493.741.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103493.741.1
Unique NamemRNA_M-pyrifera_M_contig103493.741.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A7Y2IET1_9ACTN (Apolipoprotein N-acyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IET1_9ACTN)

HSP 1 Score: 255 bits (652), Expect = 9.980e-80
Identity = 125/206 (60.68%), Postives = 153/206 (74.27%), Query Frame = 1
Query:   10 SVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNPGSYLPIETARDIVAEVARSQNATLLPGWFYPVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGI 627
            S+E A+VQGGG TRTRAS     VVL RHVEAT++ID+ V+LILWPENVVNPG +  ++ A +IV++VAR  +ATLL GWFY ++D  TVNY +A + +GVE+ RY+KVRIVPFGE+VPLRG IE       +P+  V  GT   +L TP G VGVSISWE +FERR R S+A GA++LTNPTNGASYWLTQ   QQ  S QLR I
Sbjct:  207 SLEVAAVQGGGATRTRASGESAAVVLGRHVEATRYIDQSVDLILWPENVVNPGRFFDVDAAGEIVSDVARQSDATLLTGWFYRINDRETVNYQAATSSDGVELGRYEKVRIVPFGEFVPLRGLIE--AFSSDLPTADVRQGTGPAILSTPEGVVGVSISWEAYFERRTRNSIANGAEILTNPTNGASYWLTQVATQQVASNQLRAI 410          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A6I3BZU9_9ACTN (Apolipoprotein N-acyltransferase n=2 Tax=root TaxID=1 RepID=A0A6I3BZU9_9ACTN)

HSP 1 Score: 243 bits (619), Expect = 1.090e-74
Identity = 120/223 (53.81%), Postives = 154/223 (69.06%), Query Frame = 1
Query:    1 VVRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNPG----------SYLPIETARDIVAEVARSQNATLLPGWFYPVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            VVR+++ A VQGGG  RTRA+    P+V  RHVEAT+ IDR V+L++WPENVVNP            YL  + A   +AE+AR+  AT++PGWF+ + D+ TVNY   VTP+G+  DRYDKVR+VPFGE+VPLRG ++  G+  G+P R  + GT   VLDTPVG VGVSISWE FF+ RAR ++  G Q+L NPTNGASYWLT    QQ  S++LR + T R
Sbjct:  195 VVRALDIAVVQGGGQQRTRANPENNPLVFGRHVEATRSIDRRVDLVVWPENVVNPRPPYIDENKSPQYLYADDAEATLAELARTLQATIIPGWFFAIDDSNTVNYSEVVTPDGIVTDRYDKVRMVPFGEFVPLRGMLDSLGV-TGLPPRDALPGTKPAVLDTPVGRVGVSISWEIFFDHRARDAIGNGGQILLNPTNGASYWLTILQTQQVASSRLRALETGR 416          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A520Y172_9ACTN (Apolipoprotein N-acyltransferase n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y172_9ACTN)

HSP 1 Score: 229 bits (584), Expect = 2.460e-69
Identity = 122/223 (54.71%), Postives = 148/223 (66.37%), Query Frame = 1
Query:    1 VVRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNP---GSYLP-------IETARDIVAEVARSQNATLLPGWFYPVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            V+ +++ A VQGGGP RTRA   +   V  RHVEAT  IDR V+LI+WPENVVNP   G+ L        +  A D VAEVAR QNA L+PGWF+       VNY +AV P+G  V RYDKVRIVPFGE+VPLRGFIE     + +PSR V AG    +LD+ VG  GVSISWE FFE R RA++ +G ++L NPTNG+SYWLT    QQ  S+QLR + T R
Sbjct:  225 VIDTLDVAVVQGGGPQRTRADVCENQAVFERHVEATNTIDREVDLIVWPENVVNPIADGTPLGRCDDLFYMTEAMDRVAEVARQQNAVLIPGWFHNDGPRHNVNYSTAVNPDGETVSRYDKVRIVPFGEFVPLRGFIE--NFSDDVPSRDVRAGDGPAILDSDVGRFGVSISWEIFFESRGRAAIRDGGEVLINPTNGSSYWLTILQSQQVASSQLRALETGR 445          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A355DDL8_9ACTN (Apolipoprotein N-acyltransferase (Fragment) n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A355DDL8_9ACTN)

HSP 1 Score: 218 bits (555), Expect = 1.850e-65
Identity = 117/225 (52.00%), Postives = 149/225 (66.22%), Query Frame = 1
Query:    4 VRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNPGSYLPI-----------ETARDIVAEVARSQNATLLPGWFYPVSD--TGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            V +++ A+VQGGGP RTRA+      V A  V AT+F+DRPV+L+LWPENVVNP S +P+           + A  ++A  A    A L+PGWF+  +D  T  VNY +AV P+G  VDRYDKVR VPFGE+VPLRG  E    G+ +P+R +  GT   VLDT VG +GV+ISWE FF+ R+R  V +GAQL+ NPTNGASYWLTQ   QQ  S++LR I T R
Sbjct:  201 VGTIDMAAVQGGGPQRTRATPTGAATVFANQVAATQFVDRPVDLVLWPENVVNP-SPVPVTGRRRADRLYADDAALVLAYEADRLGAVLVPGWFHGHADDPTANVNYSTAVEPDGTVVDRYDKVRTVPFGEFVPLRGLAEVVA-GDALPARDLRPGTGSAVLDTSVGRLGVTISWEVFFDHRSRDPVLDGAQLMLNPTNGASYWLTQVQTQQIASSRLRAIETGR 423          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A538CWD6_9ACTN (Apolipoprotein N-acyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CWD6_9ACTN)

HSP 1 Score: 206 bits (525), Expect = 8.860e-61
Identity = 109/223 (48.88%), Postives = 138/223 (61.88%), Query Frame = 1
Query:    4 VRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNPG-----------SYLPIETARDIVAEVARSQNATLLPGWFYPVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            +R+++ A VQGGGP RTRA   + P VL RH++AT+ I   V+L+LWPENVVNP              L  + AR IV +VAR  +   LPGWF  + D    N+  AV   G  VD Y KVR VPFGEYVPLRG +E    G  +P R V+ GT   VL+T +GP+G+SISWE FF  RAR ++  G Q+L NPTNG+SYWLT    QQ  S++LR + T R
Sbjct:  197 LRTIDVALVQGGGPQRTRADITENPQVLQRHLDATQLIKGHVDLVLWPENVVNPEPVPADGEPRDPELLYEDDARAIVDQVARDLDTVFLPGWFTHLDDRHNDNFTDAVGATGTLVDVYHKVRTVPFGEYVPLRGIVE-PFAGGALPPREVLPGTGPAVLETTLGPIGISISWEIFFASRARDAIRHGGQILVNPTNGSSYWLTIVQTQQIASSRLRALETGR 418          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A2E8LG75_9ACTN (Apolipoprotein N-acyltransferase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LG75_9ACTN)

HSP 1 Score: 205 bits (522), Expect = 3.340e-60
Identity = 106/224 (47.32%), Postives = 142/224 (63.39%), Query Frame = 1
Query:    4 VRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNPG----------SYLPIETARDIVAEVARSQNATLLPGWFY--PVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            V  ++ A VQGGGP RTRA+      V A+ +EA + ++ PV+L++WPENVVNP             L  + A D +   AR  +A L+PGWF+  P   T  +NY +A+ P+G  VDRYDKVR VPFGE+VP RG +E    G  +P+R V+ GT   VLD+ +G +GV+ISWE FFE R R + A+GA++L NPTNGASYWLT    QQ  S++LR + T R
Sbjct:  201 VGELDVALVQGGGPQRTRATPTGAATVFAKQLEANRLVETPVDLVVWPENVVNPAPEPADGVRSPDRLYADDADDALEAEARRLDAVLVPGWFHRHPTIATANLNYSTAMEPDGRVVDRYDKVRTVPFGEFVPFRGLLEAVS-GTDLPARDVLPGTGPAVLDSSIGRLGVAISWEVFFEHRTRDAAADGAEVLLNPTNGASYWLTVLQSQQVASSRLRALETGR 423          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A2E7XB84_9ACTN (Apolipoprotein N-acyltransferase n=2 Tax=root TaxID=1 RepID=A0A2E7XB84_9ACTN)

HSP 1 Score: 205 bits (521), Expect = 3.780e-60
Identity = 108/225 (48.00%), Postives = 142/225 (63.11%), Query Frame = 1
Query:    1 VVRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNP-------GSYLPIETARDIVAEV---ARSQNATLLPGWFY--PVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            VV  ++ A VQGGGP  TRA+     VV A  +EA+  ++RPV+L+LWPENVVNP       G +     A D  A +   AR  +A L+PGWF+  P   T  +NY +A+ P+G   D YDKVR VPFGE+VPLRG +E    G+ +P+R ++ GT   +L+T VG +GVSISWE FFE R R +  +GAQ+L NPTNGASYWL     QQ  S++LR + T R
Sbjct:  200 VVGEIDVALVQGGGPQGTRATPTGAAVVFANQLEASALVERPVDLVLWPENVVNPSPEPTSGGRFADRLYADDATAALGAEARRLDAVLVPGWFHRHPTIPTANLNYSTAIEPDGTVADTYDKVRSVPFGEFVPLRGLVEAVA-GDDLPARDLLPGTGSAILETSVGRLGVSISWEVFFEHRTRDAARDGAQVLLNPTNGASYWLAILQSQQVASSRLRALETGR 423          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A7Y2DDV1_9ACTN (Apolipoprotein N-acyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DDV1_9ACTN)

HSP 1 Score: 204 bits (520), Expect = 5.930e-60
Identity = 111/222 (50.00%), Postives = 140/222 (63.06%), Query Frame = 1
Query:    1 VVRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNP-----GSYLPIETARD----IVAEVARSQNATLLPGWFYPVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            V+ S+E A VQGGG  RTRA+     VV  RH+  +  ++  V+L+LWPENVVNP     GS  P    RD     ++E+A+  +A +LPGWFY +S T T+NY      +G   DRY+KVR VPFGE+VPLRG +E     + +P R V  GT   V++TPVGP+ VSISWE FFERRA   V  G QLL NPTNG+SYWLT    QQ  S+QLR + T R
Sbjct:  198 VIDSIEIAIVQGGGQQRTRATQEGAKVVFDRHIATSAQVNDGVDLVLWPENVVNPAPDPTGSRDPRRLYRDDAQLALSELAQQLDAPILPGWFYSISPTETINYTDVWLADGSVGDRYEKVRTVPFGEFVPLRGLLELFAK-DVLPPRDVRPGTEPAVIETPVGPLAVSISWEIFFERRANDGVRNGGQLLVNPTNGSSYWLTILQTQQLASSQLRAVETGR 418          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A2E5P266_9ACTN (Apolipoprotein N-acyltransferase n=2 Tax=root TaxID=1 RepID=A0A2E5P266_9ACTN)

HSP 1 Score: 204 bits (518), Expect = 1.170e-59
Identity = 105/225 (46.67%), Postives = 144/225 (64.00%), Query Frame = 1
Query:    4 VRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNP-----------GSYLPIETARDIVAEVARSQNATLLPGWFYPVSD--TGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            V +++ A VQGGGP RTRA+      V A  VEA + ++ PV+L++WPENVVNP             +L  + A  ++A  A   +A L+PGWF+  +D  T  VNY +A+ P+G  VDRYDKVRIVPFGE+VPLR  +E       +P+R +  GT   +L+T VG +GV+ISWE FF+ R+R +V  GA+++ NPTNGASYWLTQ   QQ  S++LR + T R
Sbjct:  205 VGTLDVALVQGGGPQRTRATPTGAAQVFASQVEANQLVEAPVDLVVWPENVVNPVPLPSTGEWRRQDHLYADDALTVLAAEAARLDALLVPGWFHRANDDPTANVNYQTAIEPDGTVVDRYDKVRIVPFGEFVPLRSLVEQVAANM-LPARDLRPGTEPAILETSVGTLGVTISWEVFFDHRSRDAVLHGAEVILNPTNGASYWLTQVQTQQVASSRLRALETGR 428          
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Match: A0A2E9W1R7_9ACTN (Apolipoprotein N-acyltransferase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9W1R7_9ACTN)

HSP 1 Score: 202 bits (515), Expect = 3.770e-59
Identity = 109/226 (48.23%), Postives = 145/226 (64.16%), Query Frame = 1
Query:    1 VVRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPENVVNPGSYLPIETARDI---------VAEVARSQN--ATLLPGWFY--PVSDTGTVNYHSAVTPEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVLDTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQAPSTQLRGIGTAR 639
            VV S+  A+VQGGGP RTRAS     VV A  + A++ ++ PV+++LWPENVVNP   LP   +R           +A  A +Q   A L+PGWF+  P      VNY +A+ P+G  VDRYDKVR VPFGE+VPLR  ++    G+ +P+R ++ GT + VLDT  G +GV+ISWE FF+ R R  V +GAQ++ NPTNGASYWLTQ   QQ  S++LR + T R
Sbjct:  202 VVGSLNLAAVQGGGPQRTRASPTGAAVVFANQMAASRLVESPVDVVLWPENVVNPAP-LPSSGSRRADRLYPDDADLALTAEAQRLGAVLVPGWFHRSPSDPMANVNYSTAIEPDGTVVDRYDKVRTVPFGEFVPLRWILDPIA-GDILPARDLLPGTGDAVLDTSAGRLGVTISWEVFFDHRTRDPVLDGAQVMLNPTNGASYWLTQVQTQQVASSRLRALETGR 425          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103493.741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IET1_9ACTN9.980e-8060.68Apolipoprotein N-acyltransferase n=1 Tax=Acidimicr... [more]
A0A6I3BZU9_9ACTN1.090e-7453.81Apolipoprotein N-acyltransferase n=2 Tax=root TaxI... [more]
A0A520Y172_9ACTN2.460e-6954.71Apolipoprotein N-acyltransferase n=2 Tax=Acidimicr... [more]
A0A355DDL8_9ACTN1.850e-6552.00Apolipoprotein N-acyltransferase (Fragment) n=2 Ta... [more]
A0A538CWD6_9ACTN8.860e-6148.88Apolipoprotein N-acyltransferase n=1 Tax=Actinomyc... [more]
A0A2E8LG75_9ACTN3.340e-6047.32Apolipoprotein N-acyltransferase (Fragment) n=1 Ta... [more]
A0A2E7XB84_9ACTN3.780e-6048.00Apolipoprotein N-acyltransferase n=2 Tax=root TaxI... [more]
A0A7Y2DDV1_9ACTN5.930e-6050.00Apolipoprotein N-acyltransferase n=1 Tax=Acidimicr... [more]
A0A2E5P266_9ACTN1.170e-5946.67Apolipoprotein N-acyltransferase n=2 Tax=root TaxI... [more]
A0A2E9W1R7_9ACTN3.770e-5948.23Apolipoprotein N-acyltransferase n=2 Tax=Actinobac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103493contigM-pyrifera_M_contig103493:3..641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score143.3
Seed ortholog evalue1.3e-31
Seed eggNOG ortholog1229780.BN381_100020
Preferred namelnt
KEGG koko:K03820
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Transfers the fatty acyl group on membrane lipoproteins
EggNOG OGs2GJ9F@201174,3UWR9@52018,COG0815@1,COG0815@2
COG Functional cat.M
CAZyGT2
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size639
Cds size639
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815540.451357-CDS-M-pyrifera_M_contig103493:2..6411622815540.451357-CDS-M-pyrifera_M_contig103493:2..641Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103493 3..641 +
1692277455.439172-CDS-M-pyrifera_M_contig103493:2..6411692277455.439172-CDS-M-pyrifera_M_contig103493:2..641Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103493 3..641 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103493.741.1prot_M-pyrifera_M_contig103493.741.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103493 3..641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103493.741.1

>prot_M-pyrifera_M_contig103493.741.1 ID=prot_M-pyrifera_M_contig103493.741.1|Name=mRNA_M-pyrifera_M_contig103493.741.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
VVRSVETASVQGGGPTRTRASTGQQPVVLARHVEATKFIDRPVELILWPE
NVVNPGSYLPIETARDIVAEVARSQNATLLPGWFYPVSDTGTVNYHSAVT
PEGVEVDRYDKVRIVPFGEYVPLRGFIEWTGLGEGIPSRAVIAGTAEPVL
DTPVGPVGVSISWEGFFERRARASVAEGAQLLTNPTNGASYWLTQAHPQQ
APSTQLRGIGTAR
back to top

mRNA from alignment at M-pyrifera_M_contig103493:3..641+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103493.741.1 ID=mRNA_M-pyrifera_M_contig103493.741.1|Name=mRNA_M-pyrifera_M_contig103493.741.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=639bp|location=Sequence derived from alignment at M-pyrifera_M_contig103493:3..641+ (Macrocystis pyrifera P11B4 male)
GTCGTCCGCTCGGTCGAGACCGCTTCGGTCCAGGGTGGCGGACCGACCCG GACCCGAGCGTCGACCGGCCAACAGCCGGTCGTTCTCGCACGTCACGTCG AGGCCACCAAGTTCATCGACCGGCCGGTCGAGCTCATCCTGTGGCCCGAG AACGTCGTCAATCCCGGCTCGTACCTACCGATCGAAACGGCACGCGACAT CGTGGCCGAGGTGGCCCGATCACAGAACGCCACCCTGCTCCCCGGCTGGT TCTACCCGGTCAGCGACACCGGCACGGTCAACTACCACTCGGCGGTCACT CCTGAGGGTGTCGAGGTCGACCGGTACGACAAGGTCCGCATCGTTCCCTT CGGCGAATACGTCCCGCTGCGCGGGTTCATCGAGTGGACCGGACTGGGCG AAGGGATCCCTTCTCGAGCCGTCATCGCCGGAACGGCCGAACCGGTGCTC GACACACCGGTCGGACCGGTCGGTGTGTCGATCTCGTGGGAGGGCTTCTT CGAACGACGGGCTCGCGCCTCGGTCGCCGAGGGCGCCCAACTGCTCACGA ACCCCACCAACGGGGCGTCTTACTGGCTGACCCAGGCCCACCCCCAACAG GCGCCGTCGACCCAGCTTCGGGGGATCGGGACCGCCCGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig103493:3..641+

>mRNA_M-pyrifera_M_contig103493.741.1 ID=mRNA_M-pyrifera_M_contig103493.741.1|Name=mRNA_M-pyrifera_M_contig103493.741.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig103493:3..641+ (Macrocystis pyrifera P11B4 male)
GTCGTCCGCTCGGTCGAGACCGCTTCGGTCCAGGGTGGCGGACCGACCCG
GACCCGAGCGTCGACCGGCCAACAGCCGGTCGTTCTCGCACGTCACGTCG
AGGCCACCAAGTTCATCGACCGGCCGGTCGAGCTCATCCTGTGGCCCGAG
AACGTCGTCAATCCCGGCTCGTACCTACCGATCGAAACGGCACGCGACAT
CGTGGCCGAGGTGGCCCGATCACAGAACGCCACCCTGCTCCCCGGCTGGT
TCTACCCGGTCAGCGACACCGGCACGGTCAACTACCACTCGGCGGTCACT
CCTGAGGGTGTCGAGGTCGACCGGTACGACAAGGTCCGCATCGTTCCCTT
CGGCGAATACGTCCCGCTGCGCGGGTTCATCGAGTGGACCGGACTGGGCG
AAGGGATCCCTTCTCGAGCCGTCATCGCCGGAACGGCCGAACCGGTGCTC
GACACACCGGTCGGACCGGTCGGTGTGTCGATCTCGTGGGAGGGCTTCTT
CGAACGACGGGCTCGCGCCTCGGTCGCCGAGGGCGCCCAACTGCTCACGA
ACCCCACCAACGGGGCGTCTTACTGGCTGACCCAGGCCCACCCCCAACAG
GCGCCGTCGACCCAGCTTCGGGGGATCGGGACCGCCCGCGTCGTCCGCTC
GGTCGAGACCGCTTCGGTCCAGGGTGGCGGACCGACCCGGACCCGAGCGT
CGACCGGCCAACAGCCGGTCGTTCTCGCACGTCACGTCGAGGCCACCAAG
TTCATCGACCGGCCGGTCGAGCTCATCCTGTGGCCCGAGAACGTCGTCAA
TCCCGGCTCGTACCTACCGATCGAAACGGCACGCGACATCGTGGCCGAGG
TGGCCCGATCACAGAACGCCACCCTGCTCCCCGGCTGGTTCTACCCGGTC
AGCGACACCGGCACGGTCAACTACCACTCGGCGGTCACTCCTGAGGGTGT
CGAGGTCGACCGGTACGACAAGGTCCGCATCGTTCCCTTCGGCGAATACG
TCCCGCTGCGCGGGTTCATCGAGTGGACCGGACTGGGCGAAGGGATCCCT
TCTCGAGCCGTCATCGCCGGAACGGCCGAACCGGTGCTCGACACACCGGT
CGGACCGGTCGGTGTGTCGATCTCGTGGGAGGGCTTCTTCGAACGACGGG
CTCGCGCCTCGGTCGCCGAGGGCGCCCAACTGCTCACGAACCCCACCAAC
GGGGCGTCTTACTGGCTGACCCAGGCCCACCCCCAACAGGCGCCGTCGAC
CCAGCTTCGGGGGATCGGGACCGCCCGC
back to top