prot_M-pyrifera_M_contig100312.73.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100312.73.1
Unique Nameprot_M-pyrifera_M_contig100312.73.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length147
Homology
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BLAST of mRNA_M-pyrifera_M_contig100312.73.1 vs. uniprot
Match: A0A2E5VHR7_9PLAN (SGNH_hydro domain-containing protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E5VHR7_9PLAN)

HSP 1 Score: 105 bits (263), Expect = 3.910e-24
Identity = 60/138 (43.48%), Postives = 79/138 (57.25%), Query Frame = 0 
Query:   12 FRGFAVVFGLILGLGAAELGLRLFGQELFRLGSKTYLVNEQDNVNF-HCYPDNHSGDLKPVPD-VSQGSWRLYDSSLPPNELPLADLENTPWCVEYRMSPQKLRDRVYAPTPPPGVIRVLGVGDSFAMGVGVPVERSL 147
            FR  +V+ GL  GL  AE  L + G E  RL  K  L  + +  N+ HCY  N + + +PVP+ V + SW L D+ L    +P+  LE TPWCVEY++S Q++RDR Y    P GV R+  VGDSF  G GVP    L
Sbjct:   56 FRSLSVILGLTGGLLLAEAVLWIAGVEPPRLRGKQTLTRKGETGNYYHCYASNPNQEFQPVPEEVRKESWELLDNQLRKKPVPIEWLEKTPWCVEYKVSSQQIRDREYQIPLPAGVTRIAMVGDSFVYGEGVPFHAIL 193
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BLAST of mRNA_M-pyrifera_M_contig100312.73.1 vs. uniprot
Match: A0A2V7XFM6_9BACT (SGNH_hydro domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7XFM6_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 5.610e-7
Identity = 50/143 (34.97%), Postives = 64/143 (44.76%), Query Frame = 0 
Query:    5 SSARSWLFRGFAVVFG--LILGLGAAELGLRLFGQELFRLGSKTYLVNEQDNVNFHCYPDNHSG----DLKPVPDVSQGSWRLYDSSLPPNELPLADLENTPWCVEYRMSPQKLRDRVYAPTPPPGVIRVLGVGDSFAMGVGV 141
            S AR+    G A +F   L+L   A E  LRL G E  RL +   +V+        CYP N  G    DL+      +  W      + P  L  A     PW VE+R +  + RD    P PP GV RV+ +GDSF  G GV
Sbjct:    2 SGARARAAAGSAGLFAGSLLLAFLAGEGALRLAGYEPTRLRNTARVVDSSWRALLDCYPTNPRGYFDIDLRDERTRERYRW------MAPVRLD-AVARRAPWAVEFRYNALRFRDAPLGPKPP-GVRRVMVLGDSFTEGQGV 136
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100312.73.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E5VHR7_9PLAN3.910e-2443.48SGNH_hydro domain-containing protein n=2 Tax=Planc... [more]
A0A2V7XFM6_9BACT5.610e-734.97SGNH_hydro domain-containing protein n=1 Tax=Acido... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100312contigM-pyrifera_M_contig100312:239..679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100312.73.1mRNA_M-pyrifera_M_contig100312.73.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100312 239..679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100312.73.1 ID=prot_M-pyrifera_M_contig100312.73.1|Name=mRNA_M-pyrifera_M_contig100312.73.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=147bp
PSARSSARSWLFRGFAVVFGLILGLGAAELGLRLFGQELFRLGSKTYLVN
EQDNVNFHCYPDNHSGDLKPVPDVSQGSWRLYDSSLPPNELPLADLENTP
WCVEYRMSPQKLRDRVYAPTPPPGVIRVLGVGDSFAMGVGVPVERSL
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