mRNA_M-pyrifera_M_contig103292.695.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A5A8D7R4_CAFRO (ERCC4 domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7R4_CAFRO) HSP 1 Score: 137 bits (346), Expect = 8.040e-34 Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 1 Query: 37 ELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRFGK--VGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDS--QAPEVVELAQPLSPRMQTLQR 642 E+ A D LV+ GMGL ++ +F+ + VLG + D+ +R ++ +G+ LPV I+ AA R AY RGG V++++RI ++DLLTRR V G+LV R TE+S EAFC+R+ R+ +P +VKG S P + SG +R E L++L + QL LWPRF + L + ++PEVV+L+ PL+P + LQR Sbjct: 70 EVLAEDGLLVVARGMGLRLLLERFIRVFCGGRSLVAVLGCSHDSDTIRASLSEAGVSEDHLPVAITNEMSAAARVSAYQRGGPVIVTSRILVIDLLTRRLPAEAVAGMLVAGAHRLTEASSEAFCLRLFRDANPSGFVKGFSDDPGRLASGFNRLESSLKLLGVRQLHLWPRFHALAQAGLTAPRRSPEVVDLSVPLTPCVLALQR 275
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A2P4XA07_9STRA (DNA repair endonuclease XPF n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XA07_9STRA) HSP 1 Score: 119 bits (299), Expect = 5.420e-29 Identity = 74/212 (34.91%), Postives = 114/212 (53.77%), Query Frame = 1 Query: 10 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 639 LP++ +EL+ D LVMG G+GL V+ F+ +L L A LR + GL LP + A ER++ Y RGG+ ++ARI +VDLL+ G + G+LV TE+S EAF +R+ RE++ D ++KG A++SG +R E++L+ L + + L+PRF V+ L+ PEV E+ SP M+ +Q Sbjct: 29 LPYERDVVEELYTQDGVLVMGRGLGLLRVLASFVRLYCSPRCLVLCLNANEQAATLRRLVLTLGLDRRLLPRVVDARNNLNERQQMYKRGGVFFVTARILVVDLLSNHVDPGSISGLLVNDAHHVTETSIEAFILRLYRERNRDGFIKGFCDDSVALSSGFNRVEQVLKHLYVRNVFLYPRFHVAVNSCLEKHQPEVYEIEVAFSPSMKIMQ 240
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A1X7VB04_AMPQE (ERCC4 domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VB04_AMPQE) HSP 1 Score: 124 bits (310), Expect = 5.440e-29 Identity = 72/217 (33.18%), Postives = 126/217 (58.06%), Query Frame = 1 Query: 10 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNA-VDAWHLRWNMRLS-GLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTR--RFGKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 648 L F+++ EL + D +++ +G+GL+ + KFL + +LV+G++ + H + ++ S I Q+P ++ PA ER Y +GG++ +++RI +VD+L + KV G+LV R T+SS EAF +R+ RE + ++KG S P T+G + ER++R L + + LWPRF + V+ SL+ P+V+EL Q ++P M +Q + Sbjct: 6 LDFENENFLELVSEDGLIILAKGLGLDRLFMKFLKLHSDPRNLVLVIGSSTLYEDHFKNDIAASLSNNIQQIPRSVTNEIPAKEREELYLKGGVLFVTSRILVVDMLRKVCPVDKVAGILVYNCHRVTDSSSEAFILRLYREGNKTGFIKGFSDCPEHFTTGFCQLERIMRNLFVKNVYLWPRFHAVVNSSLERHQPDVIELRQQMTPSMTAIQHSV 222
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A4D9D5Y9_9STRA (ERCC4 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Y9_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.050e-28 Identity = 77/216 (35.65%), Postives = 122/216 (56.48%), Query Frame = 1 Query: 28 ASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETI-------LVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 648 A ++L D LVM G+G + +I +FL R A ET+ L + + D L + G+ QLP I+ T + +R+ Y++GG+ ++++RI IVDLLT+R ++ G++V + R T+ S EAF +R+ REQ+ ++K S P A+ G R ER+L+ L ++ LWPR+ V L PEVVE+AQ L+P M+ +Q+ I Sbjct: 9 AFEDLMDEDGLLVMARGLGKQLLIARFLRRHA---ETLPGACVLCLHMSSLADNQLLTRALLAEGMAPEQLPRIITNDTVSTDRQALYTQGGVFLVTSRILIVDLLTKRLDVSRIRGMVVNHAHRVTDVSIEAFIIRVYREQNRTGFLKAFSDEPEALLQGFGRLERVLKYCYLRRVYLWPRYHVAVKNFLSRHEPEVVEMAQALTPAMKAVQQAI 221
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A1Y2GAL2_9FUNG (DNA repair protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GAL2_9FUNG) HSP 1 Score: 122 bits (306), Expect = 1.850e-28 Identity = 75/219 (34.25%), Postives = 128/219 (58.45%), Query Frame = 1 Query: 10 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLG-NAVDAWHLRWNMRLSGLPISQLPVH---ISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRFG--KVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 648 L FQ + EL A D L+M +G+GL +I FL + + +L++ NA + LR ++ S + + + I++ AER Y GGI+ +++RI ++DLLT R + G+LV R T +S EAF +R++R+ + +A++K S +P + T G E+ L++L L +++LWPRF V+ESL+S + +V+E+ QP++ M+T+Q I Sbjct: 6 LAFQKEIVAELVAEDALLIMAKGLGLRSIIGAFLKIYSQPQNLVLLINTNAEEEAELRDDLARS-TDVGKGGAYFRTITSEQSLAERNDLYRYGGIMAVTSRILVMDLLTARIPIHLITGILVANAHRVTATSTEAFILRLLRQSNSEAFIKAFSDQPESFTVGFATLEKTLKLLYLRKVNLWPRFHVTVTESLESHSTDVIEIRQPMTKAMKTIQAAI 223
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A3M6VFJ6_9STRA (ERCC4 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFJ6_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.880e-28 Identity = 74/212 (34.91%), Postives = 115/212 (54.25%), Query Frame = 1 Query: 10 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 639 LP++ + +EL+A D LVMG G+GL V+ F+ +L L A LR +M GL LP + A ER++ Y RGG+ ++ARI +VD L+ V G+LV TE+S EAF +R+ RE++ + ++KG A++SG +R E++L+ L + + L+PRF V+ L+ PEV E+ SP M+ +Q Sbjct: 31 LPYEKEIVEELYAQDGVLVMGRGLGLLRVLASFVRLYCSPRSLVLCLNVNDQAATLRRSMLALGLDRHLLPRVVDARNSLNERQQMYKRGGVFFVTARILVVDFLSNHMDPASVSGLLVNDAHHVTETSMEAFILRLYRERNREGFIKGFCDDSVALSSGFNRMEQVLKHLYVRNVFLYPRFHVAVNSCLEKHQPEVYEIEVAFSPSMKIMQ 242
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A6G0KZF6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0KZF6_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.320e-28 Identity = 73/212 (34.43%), Postives = 116/212 (54.72%), Query Frame = 1 Query: 10 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRF--GKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 639 LP++ + +EL+A D LV+G G+GL V+ F+ +L L A LR + GL LP + A ER++ Y RGG+ ++ARI +VDLL+ G + G+LV TE+S EAF +R+ RE++ + ++KG A++SG +R E++L+ L + + L+PRF + L+ PEV E+ SP M+T+Q Sbjct: 34 LPYEREIVEELYAQDGVLVLGRGLGLLRVLASFVRLYCSPRSLVLCLNANEQAATLRRLVLALGLDRRLLPRVVDARINLNERQQMYKRGGVFFVTARILVVDLLSNHVDPGTISGLLVNDAHHVTETSIEAFILRLYRERNREGFIKGFCGDSVALSSGFNRVEQVLKHLYVRDVFLYPRFHVAIHSCLEKYQPEVYEIEVAFSPSMKTMQ 245
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A4P9XS52_9FUNG (ERCC4 domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XS52_9FUNG) HSP 1 Score: 122 bits (305), Expect = 2.540e-28 Identity = 77/213 (36.15%), Postives = 122/213 (57.28%), Query Frame = 1 Query: 10 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERR-RAYSRGGIVVLSARIGIVDLLTRRFGK--VGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 639 LPFQ + EL D LV+ +G+GL+ ++ FL +LA T++VL NA R + L+ L +Q+ +++ AE R AY RGG++ +++RI +VDLL +R + G+LV ++ T S EAF +R+ R+++ + ++K + P G E L+ L L ++ LWPRF V ESLD+ + EVVEL QP++ RM +Q Sbjct: 5 LPFQRQIFTELLEEDGLLVLAKGLGLQRLLAAFL-QLAAERHTLVVLLNAPADEEERLRLELAELTSAQVTLNVLKNDVKAEDRVEAYRRGGLISVTSRIFVVDLLKKRVPVPLITGILVANAQKVTPYSLEAFVLRLYRQENAEGFIKAFTESPETFGVGFAPLETTLKALQLRKVHLWPRFHVAVKESLDT-SEEVVELRQPMTDRMMHIQ 215
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A2D4BR62_PYTIN (DNA repair endonuclease XPF, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR62_PYTIN) HSP 1 Score: 121 bits (303), Expect = 5.030e-28 Identity = 74/215 (34.42%), Postives = 118/215 (54.88%), Query Frame = 1 Query: 10 LPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMRLSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRRFGK--VGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQRYI 648 LP + +EL D VMG+G+GL V+ F+ A + +L L + A GL LP + A + +ER + Y +GG ++++RI +VDLL ++ + G+LV R TE+S EAF +R+ R+ + + ++K S P A+++G R E++L L L Q+SL+PRF ++ ESL + P V E+ SPRM+T+Q I Sbjct: 542 LPHERAIVEELQRQDALXVMGKGLGLYRVLSYFVRLYASPQTLVLGLNMSEYAAQFHQLALALGLDRRFLPKVLDAKSSVSERMQLYKQGGCCLVTSRILVVDLLNQKLDSKMITGLLVNDAHRVTETSVEAFVLRVYRDANREGFIKAFSDDPVALSAGFSRMEQVLXQLYLRQVSLYPRFHVDIHESLSRRQPAVYEIEVAFSPRMKTMQEAI 756
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Match: A0A1Z5LEM3_ORNMO (DNA repair endonuclease xp-f-mei-9-rad1 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LEM3_ORNMO) HSP 1 Score: 120 bits (302), Expect = 6.300e-28 Identity = 69/215 (32.09%), Postives = 124/215 (57.67%), Query Frame = 1 Query: 4 PLLPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLGNAVDAWHLRWNMR-LSGLPISQLPVHISATTPAAERRRAYSRGGIVVLSARIGIVDLLTRR--FGKVGGVLVLYVERATESSQEAFCVRIVREQHPDAWVKGVSARPSAITSGIHRAERLLRVLNLTQLSLWPRFRSEVSESLDSQAPEVVELAQPLSPRMQTLQ 639 PLL F+++ +LH D +++ +G+G+E ++ + + +L+LG DA + +R L ++ LP I+A ER Y GG++ +++RI +VD+L R + G++V + ES QEAF +R+ R+++ ++KG+S A T G + +R++R L + +L LWPRF+++V SL+ + PEV+E P++P M T+Q Sbjct: 2 PLLEFETQMFLDLHNEDGLVIVAKGLGVERLLLSLIKVNSDPGNLVLILGT--DANEEEFFIRQLEDENVNPLPRSITAECSTKERNDVYMSGGVLFVTSRILVVDMLMERVPIDLITGIIVYRAHKTLESCQEAFILRLYRQKNKKGFIKGLSDNAVAFTQGFCQVQRMMRNLFVKKLFLWPRFQADVISSLEKRKPEVLEFRVPMTPAMNTIQ 214 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103292.695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103292.695.1 >prot_M-pyrifera_M_contig103292.695.1 ID=prot_M-pyrifera_M_contig103292.695.1|Name=mRNA_M-pyrifera_M_contig103292.695.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp GPLLPFQSKASDELHAHDCFLVMGEGMGLEEVICKFLLRLAWLEETILVLback to top mRNA from alignment at M-pyrifera_M_contig103292:5..652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103292.695.1 ID=mRNA_M-pyrifera_M_contig103292.695.1|Name=mRNA_M-pyrifera_M_contig103292.695.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103292:5..652+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103292:5..652+ >mRNA_M-pyrifera_M_contig103292.695.1 ID=mRNA_M-pyrifera_M_contig103292.695.1|Name=mRNA_M-pyrifera_M_contig103292.695.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103292:5..652+ (Macrocystis pyrifera P11B4 male)back to top |