mRNA_M-pyrifera_M_contig103283.690.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103283.690.1
Unique NamemRNA_M-pyrifera_M_contig103283.690.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A7Y5CA88_9BACT (Alpha/beta fold hydrolase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5CA88_9BACT)

HSP 1 Score: 251 bits (640), Expect = 1.070e-80
Identity = 116/206 (56.31%), Postives = 150/206 (72.82%), Query Frame = 1
Query:   13 HVFVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
             + V D  P  +PIWRE L GVD++RL++S VYYGIG PKG+G+AV++VPGF+  D YLIEL  WL R+GY PYMS IG NA+CPN+L++HL +T  RA+ +TG++VHLIGHSLGGV SR+ A  HPD I +V +LGSPIRGVRVHPWVL  +++VR +I+ +    P   +P    CYT+ C CGF+CTWR  F   V Q  +YT
Sbjct:    6 QLLVKDHVPMHLPIWRESLMGVDYVRLKSSLVYYGIGTPKGDGSAVVMVPGFLAIDVYLIELYAWLWRLGYKPYMSHIGQNAECPNILIDHLMETVDRAYLKTGKRVHLIGHSLGGVLSRSAAVLHPDRIATVITLGSPIRGVRVHPWVLGSAERVRQKIYNRRHLFPPH-KPHDHQCYTSRCMCGFSCTWREGFPDTVRQAAVYT 210          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A2A5EAB5_9BACT (AB hydrolase-1 domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5EAB5_9BACT)

HSP 1 Score: 217 bits (552), Expect = 3.160e-67
Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 1
Query:    4 GQGHVFVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            G+  VFVD+ EP  +P+WRE   GVDWMRLR + V+YG GV +G+G AVI VPGFMG+D YL E+NRWL+RIGYT Y S IG N DCP++L + L  T +RA++ET + VHLIGHSLGG+ SR + +  PDL  SV +LGSP RG+R HP V+   + VR RI  K  ++P   +P    C++  C+C F    R      + Q  +YT
Sbjct:   14 GKKFVFVDEEEPVLLPLWREVFTGVDWMRLRGNRVFYGXGVERGHGEAVITVPGFMGSDLYLREMNRWLRRIGYTSYPSGIGRNMDCPDILADKLLATVERAYEETEKPVHLIGHSLGGMLSRAVTRFAPDLXGSVITLGSPFRGLRSHPQVIKTGNYVRRRIELKKHERPAH-KPMKDSCFSGTCSCEFAEALREGLPDSMPQTAVYT 221          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A1F8RQU9_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_16_68_14 TaxID=1797660 RepID=A0A1F8RQU9_9CHLR)

HSP 1 Score: 210 bits (535), Expect = 3.790e-65
Identity = 102/210 (48.57%), Postives = 133/210 (63.33%), Query Frame = 1
Query:    1 LGQGHVFVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            +G   V    L PA VP+WRE L GVDW+ LR S VYYG+GVP G+G+ VIV+PGF+G+DTYL E+  WL+RIGY  Y SRIG NA+CP++L E L +T  +A+ ETG+K+ LIGHSLGG+ +R+ A   P+ +  V SL +P R +RVHP VL+ +  VR RI  +  +          DCYT +C C F    R E    V    IYT
Sbjct:    1 MGAAEVTQPRLGPANVPLWREALFGVDWLSLRLSPVYYGVGVPHGDGSPVIVIPGFLGSDTYLFEMYYWLRRIGYKSYYSRIGRNAECPDILRERLFETMAQAYAETGQKLRLIGHSLGGLLARSAAVARPEQVAQVISLAAPFRDMRVHPMVLAAAGFVRGRIRGRRGRNGNVQH----DCYTTECTCAFATAARSELPDSVSHAAIYT 206          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A7Y4UC28_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4UC28_9BACT)

HSP 1 Score: 207 bits (528), Expect = 3.960e-64
Identity = 106/206 (51.46%), Postives = 132/206 (64.08%), Query Frame = 1
Query:   13 HVFVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
              F  +   A+VP+WRE + G+DWM L AS VYYG GVP+G+ +AVIVVPGF+ TD YL E+N WL+RIGY   MSRIG NA+C NVL + L +T ++A+ ETGRKVHLIGHSLGGV SR++A    D + SV +LGSP RGVR HP VL  +D VR+   RK        R +  DCYT  C C      +     +V    IYT
Sbjct:    5 QTFEKNRRAADVPLWREAMVGLDWMSLHASPVYYGWGVPRGDQSAVIVVPGFLATDHYLWEMNLWLRRIGYRARMSRIGWNAECLNVLTDRLGETIEKAYVETGRKVHLIGHSLGGVLSRSIAARQADKVASVVTLGSPFRGVRSHPLVLDRADDVRNFFLRKR-------RAEWPDCYTGYCTCPAVSAMQAPLPDEVRATAIYT 203          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A536M1K4_9CHLR (Uncharacterized protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536M1K4_9CHLR)

HSP 1 Score: 207 bits (526), Expect = 1.190e-63
Identity = 98/197 (49.75%), Postives = 135/197 (68.53%), Query Frame = 1
Query:   40 AEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            A +P+WRE L G+DW+ LR S+VY GIG+P G+ +AV+++PGFMG+D YL ++  WL RIGY PY+S IG NADCP VL   L +T  RA++E+G KVHL+GHSLGGV +R  A   P L+ SV ++ SP RGVRVHP+VL  +  VR RI ++  +    + P   +CY+ +CAC F  + R  F + + +L IYT
Sbjct:   16 ASLPLWREALLGIDWLSLRISAVYLGIGIPHGDNSAVLIIPGFMGSDQYLGDMYGWLGRIGYQPYLSGIGRNADCPEVLTMRLRETIDRAYQESGGKVHLVGHSLGGVIARGAATRWPHLVASVTTMASPFRGVRVHPFVLQTAFLVRGRIRQR--RNGPSIMP---NCYSGECACEFVTSVRANFPASMPKLAIYT 207          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A535DLU5_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535DLU5_9CHLR)

HSP 1 Score: 205 bits (522), Expect = 4.770e-63
Identity = 102/198 (51.52%), Postives = 133/198 (67.17%), Query Frame = 1
Query:   40 AEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKST-DCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            + +P+WRE L G+DW+ LR S VY GIGVP G+G+AV+V+PGFMG+D YL +++ WL R+GY PY+S IG NA+CP VL   L +T + A+ E+G KVHLIGHSLGGV +R  A   P L  SV ++GSP RGVRVHP+VL  +  VR RI +      R   PK+  +CY+  C C F  + R +F   V QL IYT
Sbjct:   15 SSLPLWREALLGIDWISLRMSPVYRGIGVPPGDGSAVVVIPGFMGSDQYLGDMHAWLSRVGYRPYLSGIGRNAECPEVLTMRLFETIQAAYAESGGKVHLIGHSLGGVIARGAAARWPHLAASVTTMGSPFRGVRVHPFVLQTAYLVRGRILQ------RRNGPKTLPNCYSGTCTCEFLQSLRSDFPLSVPQLAIYT 206          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A1Q3THY3_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium 54-19 TaxID=1895928 RepID=A0A1Q3THY3_9CHLR)

HSP 1 Score: 202 bits (514), Expect = 8.210e-62
Identity = 101/210 (48.10%), Postives = 127/210 (60.48%), Query Frame = 1
Query:    1 LGQGHVFVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            + +   F  +L P   PI+RE L+GVDW+ L  S VYYG GVP+G+G+AV++VPGF+ TD YL E+  WL RIGY  Y+S IG NADC   L+  L  T ++AF ETGRKVHLIGHSLGGV SR LA   P+ I SV ++ SP RG+  HP VL  S+ VR R+  +  K+     P    C T  C C      R     D+ Q  IYT
Sbjct:    1 MAEKQTFSSELLPVRTPIYRELLSGVDWLALHYSPVYYGFGVPRGDGSAVVLVPGFLATDAYLTEMKCWLNRIGYRTYLSNIGRNADCLETLVNRLQATVEKAFHETGRKVHLIGHSLGGVLSRALAARSPEFIASVITMASPFRGISSHPLVLQASNVVRQRLQFEKKKEG----PPQPHCMTGWCTCSAGQALRNRLPGDIMQTAIYT 206          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A2V7HZC8_9BACT (Uncharacterized protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7HZC8_9BACT)

HSP 1 Score: 202 bits (513), Expect = 9.410e-62
Identity = 101/204 (49.51%), Postives = 133/204 (65.20%), Query Frame = 1
Query:   19 FVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            F  D  PA VPIWRE LAG+DW+ LRAS ++YG G  +G+GA V+VVPGF+G+D YL+EL+ WL+RIGY  Y+SRIG NA+C ++L++ L +T  RA ++TGR VHLIGHSLGGV SR  A   P+ I SV +LGSP RG+R HP ++  +  VR R+ R+          +  DCYT  C C        +    V Q+ IYT
Sbjct:    8 FHQDERPAGVPIWRETLAGLDWLSLRASPIFYGWGATRGDGAPVVVVPGFLGSDLYLLELHCWLERIGYRAYLSRIGRNAECIDLLVDRLFETIDRAHEDTGRGVHLIGHSLGGVLSRAAAARRPERIASVITLGSPFRGIRSHPLIMGATSAVRARLRRQG---------RGPDCYTGRCGCDSVRAL--QTVPPVPQIAIYT 200          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A3E0PKC6_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3E0PKC6_9BACT)

HSP 1 Score: 201 bits (512), Expect = 2.030e-61
Identity = 104/204 (50.98%), Postives = 131/204 (64.22%), Query Frame = 1
Query:   19 FVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            F  ++    +PIW E L GVDW  L  S VYYG GV KG+G+AVIVVPGF+G+D YL EL  WLKRIGY+PY+S IG NADC N L E L +T  RA+++TG+ VHL+GHSLGGV SR+       +I+SV +L SP RGVR HP VL +S+++RDRI     ++ RE  P    CYT  C C    +       DV Q  I+T
Sbjct:   30 FDREIRAHSLPIWFESLVGVDWTLLHLSPVYYGFGVEKGDGSAVIVVPGFLGSDVYLYELYLWLKRIGYSPYLSNIGWNADCLNTLSERLIETIGRAYEDTGKPVHLVGHSLGGVLSRSAVVQKRKMIESVITLASPFRGVRSHPGVLELSEKIRDRIFN---RRDREDYPH---CYTGHCDCLAVTSLHDGMPRDVKQTAIFT 227          
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Match: A0A3M2D231_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2D231_9BACT)

HSP 1 Score: 200 bits (509), Expect = 7.770e-61
Identity = 98/213 (46.01%), Postives = 138/213 (64.79%), Query Frame = 1
Query:    1 LGQGHVFVD---DLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAVIVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTAKRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVHPWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFTSDVDQLVIYT 630
            +  G +  D   ++  + +PI+ E L G+DW  L  S VYYG+G+P GNGA V++VPGF+G+D YL EL  WL RIGY PY S IG NADC ++L++ L KT ++A+ ETGRK+HLIGHSLGG+ SR++A   P+LI+SV +L SP RGVR HP V+ ++++VR +I   S K       +  +CYT  C C    +     +  V ++ IYT
Sbjct:   29 VADGEISADFDREIRASSLPIYFESLVGLDWFLLHLSPVYYGLGIPHGNGAGVVLVPGFLGSDVYLYELYLWLSRIGYKPYFSGIGWNADCLDILVKKLLKTVEKAYSETGRKIHLIGHSLGGILSRSVATQKPNLIESVVTLASPFRGVRSHPKVIRLAEKVRRKIFATSDKS------QHPECYTGYCNCKAVSSLSAFPSDKVKRIAIYT 235          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103283.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y5CA88_9BACT1.070e-8056.31Alpha/beta fold hydrolase n=1 Tax=Candidatus Hydro... [more]
A0A2A5EAB5_9BACT3.160e-6750.24AB hydrolase-1 domain-containing protein n=1 Tax=C... [more]
A0A1F8RQU9_9CHLR3.790e-6548.57Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A7Y4UC28_9BACT3.960e-6451.46Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A536M1K4_9CHLR1.190e-6349.75Uncharacterized protein n=3 Tax=Chloroflexi bacter... [more]
A0A535DLU5_9CHLR4.770e-6351.52Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A1Q3THY3_9CHLR8.210e-6248.10Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A2V7HZC8_9BACT9.410e-6249.51Uncharacterized protein n=2 Tax=Candidatus Rokubac... [more]
A0A3E0PKC6_9BACT2.030e-6150.98Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A3M2D231_9BACT7.770e-6146.01Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103283contigM-pyrifera_M_contig103283:24..653 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score188.3
Seed ortholog evalue3.5e-45
Seed eggNOG ortholog204669.Acid345_0349
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PGAP1-like protein
EggNOG OGs3Y77G@57723,COG1075@1,COG1075@2
COG Functional cat.S
Best tax levelAcidobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size630
Cds size630
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815537.575798-CDS-M-pyrifera_M_contig103283:23..6531622815537.575798-CDS-M-pyrifera_M_contig103283:23..653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103283 24..653 +
1692277454.2703247-CDS-M-pyrifera_M_contig103283:23..6531692277454.2703247-CDS-M-pyrifera_M_contig103283:23..653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103283 24..653 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103283.690.1prot_M-pyrifera_M_contig103283.690.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103283 24..653 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103283.690.1

>prot_M-pyrifera_M_contig103283.690.1 ID=prot_M-pyrifera_M_contig103283.690.1|Name=mRNA_M-pyrifera_M_contig103283.690.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
LGQGHVFVDDLEPAEVPIWREGLAGVDWMRLRASSVYYGIGVPKGNGAAV
IVVPGFMGTDTYLIELNRWLKRIGYTPYMSRIGHNADCPNVLLEHLHKTA
KRAFKETGRKVHLIGHSLGGVFSRNLAQHHPDLIQSVASLGSPIRGVRVH
PWVLSMSDQVRDRIHRKSPKKPRELRPKSTDCYTADCACGFTCTWRGEFT
SDVDQLVIYT
back to top

mRNA from alignment at M-pyrifera_M_contig103283:24..653+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103283.690.1 ID=mRNA_M-pyrifera_M_contig103283.690.1|Name=mRNA_M-pyrifera_M_contig103283.690.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig103283:24..653+ (Macrocystis pyrifera P11B4 male)
TTGGGACAGGGCCACGTTTTCGTGGACGACCTGGAACCGGCCGAAGTGCC GATCTGGCGTGAAGGCCTGGCGGGTGTGGACTGGATGCGCCTGCGGGCGT CAAGCGTCTATTACGGTATCGGCGTGCCGAAGGGCAATGGCGCAGCGGTA ATCGTTGTTCCCGGCTTCATGGGTACGGACACCTACCTCATCGAACTGAA TCGCTGGCTCAAGCGCATCGGCTACACACCGTACATGTCGCGTATCGGCC ACAATGCCGACTGCCCCAACGTCTTACTCGAACATCTGCACAAGACCGCG AAACGCGCATTCAAGGAAACAGGCCGCAAAGTGCATTTAATCGGCCATAG CCTCGGCGGCGTGTTCTCGCGGAACCTAGCCCAACATCATCCTGACCTTA TTCAATCCGTAGCATCCCTTGGATCGCCGATTCGTGGCGTGCGCGTACAT CCCTGGGTGTTGTCGATGAGTGACCAAGTACGTGATCGCATCCATCGTAA GAGCCCGAAAAAGCCGCGCGAACTTCGACCGAAATCAACGGACTGTTACA CTGCGGATTGTGCGTGCGGATTCACCTGTACGTGGCGCGGTGAATTCACT TCGGATGTCGATCAACTCGTGATCTATACC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig103283:24..653+

>mRNA_M-pyrifera_M_contig103283.690.1 ID=mRNA_M-pyrifera_M_contig103283.690.1|Name=mRNA_M-pyrifera_M_contig103283.690.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig103283:24..653+ (Macrocystis pyrifera P11B4 male)
TTGGGACAGGGCCACGTTTTCGTGGACGACCTGGAACCGGCCGAAGTGCC
GATCTGGCGTGAAGGCCTGGCGGGTGTGGACTGGATGCGCCTGCGGGCGT
CAAGCGTCTATTACGGTATCGGCGTGCCGAAGGGCAATGGCGCAGCGGTA
ATCGTTGTTCCCGGCTTCATGGGTACGGACACCTACCTCATCGAACTGAA
TCGCTGGCTCAAGCGCATCGGCTACACACCGTACATGTCGCGTATCGGCC
ACAATGCCGACTGCCCCAACGTCTTACTCGAACATCTGCACAAGACCGCG
AAACGCGCATTCAAGGAAACAGGCCGCAAAGTGCATTTAATCGGCCATAG
CCTCGGCGGCGTGTTCTCGCGGAACCTAGCCCAACATCATCCTGACCTTA
TTCAATCCGTAGCATCCCTTGGATCGCCGATTCGTGGCGTGCGCGTACAT
CCCTGGGTGTTGTCGATGAGTGACCAAGTACGTGATCGCATCCATCGTAA
GAGCCCGAAAAAGCCGCGCGAACTTCGACCGAAATCAACGGACTGTTACA
CTGCGGATTGTGCGTGCGGATTCACCTGTACGTGGCGCGGTGAATTCACT
TCGGATGTCGATCAACTCGTGATCTATACCTTGGGACAGGGCCACGTTTT
CGTGGACGACCTGGAACCGGCCGAAGTGCCGATCTGGCGTGAAGGCCTGG
CGGGTGTGGACTGGATGCGCCTGCGGGCGTCAAGCGTCTATTACGGTATC
GGCGTGCCGAAGGGCAATGGCGCAGCGGTAATCGTTGTTCCCGGCTTCAT
GGGTACGGACACCTACCTCATCGAACTGAATCGCTGGCTCAAGCGCATCG
GCTACACACCGTACATGTCGCGTATCGGCCACAATGCCGACTGCCCCAAC
GTCTTACTCGAACATCTGCACAAGACCGCGAAACGCGCATTCAAGGAAAC
AGGCCGCAAAGTGCATTTAATCGGCCATAGCCTCGGCGGCGTGTTCTCGC
GGAACCTAGCCCAACATCATCCTGACCTTATTCAATCCGTAGCATCCCTT
GGATCGCCGATTCGTGGCGTGCGCGTACATCCCTGGGTGTTGTCGATGAG
TGACCAAGTACGTGATCGCATCCATCGTAAGAGCCCGAAAAAGCCGCGCG
AACTTCGACCGAAATCAACGGACTGTTACACTGCGGATTGTGCGTGCGGA
TTCACCTGTACGTGGCGCGGTGAATTCACTTCGGATGTCGATCAACTCGT
GATCTATACC
back to top