prot_M-pyrifera_M_contig103279.689.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103279.689.1
Unique Nameprot_M-pyrifera_M_contig103279.689.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length217
Homology
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A7C1X4Z0_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1X4Z0_9BACT)

HSP 1 Score: 249 bits (637), Expect = 1.350e-79
Identity = 131/217 (60.37%), Postives = 156/217 (71.89%), Query Frame = 0
Query:    1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            ++E V PRRN L RI+S+HDPR Q+LFANVD +FV+ S+ KP FSSNRTDRILAAC + EIP  L+LNK+DLDK G  AD+ ETY +AG  ++ T AI      ELADLR  LAG+ S  YGASG GKST+LN LEP L LK  KISK+W AG+HTTTFS+++RL         ++ VIDTPGIRVFR   V  A LRD FPEF P Q RC FP+CS
Sbjct:   64 AVEEVLPRRNWLPRISSSHDPRHQILFANVDQLFVVGSIQKPRFSSNRTDRILAACVYHEIPTGLILNKVDLDKEGWAADIRETYEAAGTTVLETRAI----DGELADLRERLAGKISVLYGASGAGKSTILNTLEPGLKLKTAKISKHWDAGRHTTTFSRMYRL------AALDAHVIDTPGIRVFRIADVNKAELRDCFPEFAPFQARCRFPDCS 270          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A2D5AVY3_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AVY3_9BACT)

HSP 1 Score: 237 bits (605), Expect = 9.080e-75
Identity = 125/216 (57.87%), Postives = 154/216 (71.30%), Query Frame = 0
Query:    2 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            +E V  R N L RIAS+HDPREQ+LFANVD +F+IASVA+P FSSNR DRILAAC + EIP  L+LNK+DLDK G    + ETY +A + ++   A        L +L   L  + S FYGASG GKST+LNA++P L+L+VGKIS++W  GKHTTTFSQ+HR   EA P      VIDTPGIRVFR  G+  A LRDLFPEF P Q++CHFP+C+
Sbjct:   62 VEEVLRRVNFLPRIASSHDPREQILFANVDQLFIIASVAQPTFSSNRADRILAACSYHEIPAWLILNKIDLDKGGQARAICETYEAAEVPVLEMCASEKRGMEPLIEL---LRNKISVFYGASGAGKSTILNAIQPGLNLRVGKISRFWDQGKHTTTFSQMHRF--EALPAR----VIDTPGIRVFRLAGINKAELRDLFPEFQPFQEQCHFPDCT 268          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A518BSF1_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BSF1_9BACT)

HSP 1 Score: 236 bits (603), Expect = 3.330e-74
Identity = 123/216 (56.94%), Postives = 156/216 (72.22%), Query Frame = 0
Query:    2 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            +E V PR N LS+++S+HDPREQ+LFANVD +  +ASV +PGFSSNRTDRILAAC  +EIP ++VLNK+DLD RG    +VETY  AG E+I T+A        L  LRA L G+T+  YGASGVGKSTL+N L   + LK+GKIS++W+ GKHTTTFS+       A P  G++WV+DTPGIRVFR YG+   +LR LFP+F P   +C FPNC+
Sbjct:   81 VELVLPRDNYLSKVSSSHDPREQILFANVDQLINVASVGQPGFSSNRTDRILAACEWQEIPASIVLNKVDLDARGDVEGIVETYERAGYEVIQTSA---EKREGLERLRAKLDGKTTVLYGASGVGKSTLINELY-GMKLKIGKISRFWSQGKHTTTFSR-------AIPIDGDTWVVDTPGIRVFRLYGLNKGQLRHLFPDFAPYNTKCRFPNCA 285          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A518D4I3_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D4I3_9BACT)

HSP 1 Score: 235 bits (599), Expect = 1.380e-73
Identity = 126/216 (58.33%), Postives = 154/216 (71.30%), Query Frame = 0
Query:    2 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            IE V PR N LS+++S+HDPR QVLFANVD + +++S+ KPGFSSNRTDRILAACR EEIP  L+LNK+DLD  G    + ETY  AG  ++ T+A       EL DL   L G+ S  YGASGVGKSTLLNAL   L LKVGKIS+YW++GKHTTTFS+   +  E   E G + V+DTPGIRVFR +GV   +LR L+P+F P   +CHFPNCS
Sbjct:   81 IEEVLPRENSLSKVSSSHDPRRQVLFANVDQVILVSSLGKPGFSSNRTDRILAACRLEEIPAVLLLNKIDLDPGGEAEAIRETYTGAGYPVLETSAEQGIGLEELRDL---LHGKVSVLYGASGVGKSTLLNALY-GLQLKVGKISRYWSSGKHTTTFSRWIPIDVEGEREAG-TVVVDTPGIRVFRLWGVNRRQLRHLYPDFEPYNTKCHFPNCS 291          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A7Y5Q031_9PLAN (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5Q031_9PLAN)

HSP 1 Score: 231 bits (589), Expect = 2.680e-72
Identity = 123/217 (56.68%), Postives = 149/217 (68.66%), Query Frame = 0
Query:    1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            S++AV PRRN+L R AS+HDPREQVL ANVD + ++ASV KP FSSNRTDRIL A    ++P  LVLNK+DLD+ G    +  TY   G++++ T+  A     EL   RA L  R +A YGASGVGKS+LLNAL+P L LK+GKISK+W  GKHTT+FSQLHRL      E G  WV DTPGIR FR +   PA LR +FPEF   Q  C FP+CS
Sbjct:   63 SLDAVLPRRNRLGRTASSHDPREQVLIANVDQLCIVASVEKPKFSSNRTDRILGAALWYDVPALLVLNKVDLDRDGSVEAIARTYEGIGVDVVRTSVTAGLGVEEL---RARLKDRVTALYGASGVGKSSLLNALQPGLKLKIGKISKFWDGGKHTTSFSQLHRL------EFG-GWVADTPGIRTFRLHKADPAALRGMFPEFARFQGACRFPDCS 269          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A2E5X4L2_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X4L2_9BACT)

HSP 1 Score: 230 bits (587), Expect = 6.060e-72
Identity = 123/217 (56.68%), Postives = 155/217 (71.43%), Query Frame = 0
Query:    1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            +IE V PRRN LSR+AS+HDPREQVL ANVD + ++ S+++PGFSSNRTDRILAAC   EIP  LVLNK DL + G    + E+YA+A + ++ T AI   D   LA+L AAL  + +  YGASG GKSTLLNAL+P L+LKVGK SKYW +GKHTTTFS+LH L      + G  +VIDTPG+RVFR + ++ A L DLFPEF   +  C + +CS
Sbjct:   66 AIEEVLPRRNHLSRVASSHDPREQVLVANVDQLVLVGSLSRPGFSSNRTDRILAACAWHEIPAVLVLNKTDLAREGEVEAIRESYAAARVLVLQTCAI---DGGGLAELAAALKDKVTVLYGASGAGKSTLLNALQPGLNLKVGKTSKYWKSGKHTTTFSELHPL------DMG-GFVIDTPGVRVFRLHDISRAALPDLFPEFSAFEVNCRYQDCS 272          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A518EZP8_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EZP8_9BACT)

HSP 1 Score: 228 bits (581), Expect = 9.050e-71
Identity = 119/219 (54.34%), Postives = 153/219 (69.86%), Query Frame = 0
Query:    1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVE-TYASA-GIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            S+E V PRRN L R+AS+HDPREQVL ANVD +F++ S+  PGFSSNRTDRILAACR  EIP  LV NK DLDK+ V  D    TYA    +E++ T+ +   D   + +L+A L G+ S  YG SG GKS+LLNA++P L +K GKIS YW  GKHTTT+S+LHR+      + G  +V+DTPGIRVFRP+G+T + +RDLFP+F   Q  C + NC+
Sbjct:   84 SVEEVLPRRNYLGRVASSHDPREQVLVANVDQLFMVGSLKNPGFSSNRTDRILAACRWHEIPAVLVFNKADLDKKNVLMDKYRGTYAGIPDLEILVTSTV---DGRGIEELKARLRGKVSVLYGPSGAGKSSLLNAIQPGLKIKEGKISAYWKQGKHTTTYSRLHRM------DLG-GYVVDTPGIRVFRPHGLTRSHVRDLFPDFAKFQALCAYANCT 292          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A2D5W5C0_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5C0_9BACT)

HSP 1 Score: 219 bits (559), Expect = 1.490e-67
Identity = 118/217 (54.38%), Postives = 149/217 (68.66%), Query Frame = 0
Query:    1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            +IE V PR N LSR+AS+HDPREQVL ANVD + ++ S+++PGFSSNRTDRILAAC   EIP  LVLNK DL + G    + +TYA+A + ++ T A        LAD    L  + +  YGASG GKSTLLNAL+P L+LKVGK SKYW +GKHTTTFS+LH L      + G  +VIDTPG+RVFR + ++ A L DLFPEF   +  C + +CS
Sbjct:   79 AIEEVLPRSNHLSRVASSHDPREQVLVANVDQLVLVGSLSRPGFSSNRTDRILAACAWHEIPAVLVLNKTDLARDGDLDAIRDTYAAAQVRVLPTCATEGHGLEALADT---LKDKVTVLYGASGAGKSTLLNALQPGLNLKVGKTSKYWKSGKHTTTFSELHAL------DMG-GFVIDTPGVRVFRLHDISRAALPDLFPEFSAFESNCRYQDCS 285          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A800N2K4_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800N2K4_9BACT)

HSP 1 Score: 217 bits (553), Expect = 5.260e-67
Identity = 114/216 (52.78%), Postives = 149/216 (68.98%), Query Frame = 0
Query:    2 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            ++ V PR+N L RIAS+HDPREQVL ANVD + +I+S+ +P FSSNRTDRILAAC  +EIP TLVLNK+DL  R     +++TYAS  I ++ T+A++      L +LR  L  + S  YG SG GKSTLLN ++P L+L+ G+ISKYW  G+HTTT S+LH L      E G  +V+DTPGIR FR + V+   LRDLFP+ H +   C FP+CS
Sbjct:   62 VQTVLPRQNYLGRIASSHDPREQVLVANVDQLLIISSLRQPSFSSNRTDRILAACEWQEIPATLVLNKIDLIMREEIDGILKTYASVPIPVLPTSAVS---GEGLEELRTLLKDKVSVLYGPSGAGKSTLLNKIQPDLNLREGRISKYWKQGRHTTTHSRLHPL------EIG-GYVVDTPGIRAFRLFDVSARELRDLFPDIHRISSGCQFPDCS 267          
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A800G3H8_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G3H8_9BACT)

HSP 1 Score: 217 bits (552), Expect = 1.030e-66
Identity = 114/217 (52.53%), Postives = 146/217 (67.28%), Query Frame = 0
Query:    1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 217
            +IE+VH RRN L R AS+HDPREQ+L AN D +F+++S+  PGFSSNRTDRIL+AC   EIPV LV+NK+DL   G   D+  TY +  IE+I T A+   D   +  L+  +  + S  YG SG GKSTL+NA++P L+L+ GKIS YW  GKHTT++S L       P E G  WV+DTPGIRVFR +G+    LRDLFPEF  +Q +C F  CS
Sbjct:   68 AIESVHERRNYLGRTASSHDPREQILVANADQLFIVSSLQSPGFSSNRTDRILSACIWHEIPVILVINKIDLTGAGDLEDIRRTYEAVPIEVIETCAV---DGRGVEALKDRMRDKVSVLYGPSGAGKSTLINAVQPGLNLREGKISSYWKQGKHTTSYSHL------IPLEMG-GWVVDTPGIRVFRLHGLKRNLLRDLFPEFERIQDKCRFDGCS 274          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1X4Z0_9BACT1.350e-7960.37Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A2D5AVY3_9BACT9.080e-7557.87Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A518BSF1_9BACT3.330e-7456.94Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A518D4I3_9BACT1.380e-7358.33Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A7Y5Q031_9PLAN2.680e-7256.68Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A2E5X4L2_9BACT6.060e-7256.68Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A518EZP8_9BACT9.050e-7154.34Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A2D5W5C0_9BACT1.490e-6754.38Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A800N2K4_9BACT5.260e-6752.78Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A800G3H8_9BACT1.030e-6652.53Small ribosomal subunit biogenesis GTPase RsgA n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010914RsgA GTPase domainPFAMPF03193RsgA_GTPasecoord: 5..187
e-value: 1.7E-42
score: 145.2
IPR010914RsgA GTPase domainPROSITEPS50936ENGC_GTPASEcoord: 28..185
score: 30.42
IPR004881Ribosome biogenesis GTPase RsgATIGRFAMTIGR00157TIGR00157coord: 3..216
e-value: 1.3E-37
score: 127.6
IPR004881Ribosome biogenesis GTPase RsgAPANTHERPTHR32120FAMILY NOT NAMEDcoord: 2..217
NoneNo IPR availableGENE3D3.40.50.300coord: 19..188
e-value: 1.3E-36
score: 127.7
NoneNo IPR availablePANTHERPTHR32120:SF9SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGAcoord: 2..217
IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainPROSITEPS51721G_CPcoord: 9..187
score: 32.934
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 24..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103279contigM-pyrifera_M_contig103279:3..653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103279.689.1mRNA_M-pyrifera_M_contig103279.689.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103279 3..653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103279.689.1 ID=prot_M-pyrifera_M_contig103279.689.1|Name=mRNA_M-pyrifera_M_contig103279.689.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTD
RILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIAD
ADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYW
TAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDL
FPEFHPLQKRCHFPNCS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010914RsgA_GTPase_dom
IPR004881Ribosome_biogen_GTPase_RsgA
IPR030378G_CP_dom
IPR027417P-loop_NTPase