mRNA_M-pyrifera_M_contig103279.689.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A7C1X4Z0_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1X4Z0_9BACT) HSP 1 Score: 249 bits (637), Expect = 1.350e-79 Identity = 131/217 (60.37%), Postives = 156/217 (71.89%), Query Frame = 1 Query: 1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 ++E V PRRN L RI+S+HDPR Q+LFANVD +FV+ S+ KP FSSNRTDRILAAC + EIP L+LNK+DLDK G AD+ ETY +AG ++ T AI ELADLR LAG+ S YGASG GKST+LN LEP L LK KISK+W AG+HTTTFS+++RL ++ VIDTPGIRVFR V A LRD FPEF P Q RC FP+CS Sbjct: 64 AVEEVLPRRNWLPRISSSHDPRHQILFANVDQLFVVGSIQKPRFSSNRTDRILAACVYHEIPTGLILNKVDLDKEGWAADIRETYEAAGTTVLETRAI----DGELADLRERLAGKISVLYGASGAGKSTILNTLEPGLKLKTAKISKHWDAGRHTTTFSRMYRL------AALDAHVIDTPGIRVFRIADVNKAELRDCFPEFAPFQARCRFPDCS 270
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A2D5AVY3_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AVY3_9BACT) HSP 1 Score: 237 bits (605), Expect = 9.080e-75 Identity = 125/216 (57.87%), Postives = 154/216 (71.30%), Query Frame = 1 Query: 4 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 +E V R N L RIAS+HDPREQ+LFANVD +F+IASVA+P FSSNR DRILAAC + EIP L+LNK+DLDK G + ETY +A + ++ A L +L L + S FYGASG GKST+LNA++P L+L+VGKIS++W GKHTTTFSQ+HR EA P VIDTPGIRVFR G+ A LRDLFPEF P Q++CHFP+C+ Sbjct: 62 VEEVLRRVNFLPRIASSHDPREQILFANVDQLFIIASVAQPTFSSNRADRILAACSYHEIPAWLILNKIDLDKGGQARAICETYEAAEVPVLEMCASEKRGMEPLIEL---LRNKISVFYGASGAGKSTILNAIQPGLNLRVGKISRFWDQGKHTTTFSQMHRF--EALPAR----VIDTPGIRVFRLAGINKAELRDLFPEFQPFQEQCHFPDCT 268
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A518BSF1_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BSF1_9BACT) HSP 1 Score: 236 bits (603), Expect = 3.330e-74 Identity = 123/216 (56.94%), Postives = 156/216 (72.22%), Query Frame = 1 Query: 4 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 +E V PR N LS+++S+HDPREQ+LFANVD + +ASV +PGFSSNRTDRILAAC +EIP ++VLNK+DLD RG +VETY AG E+I T+A L LRA L G+T+ YGASGVGKSTL+N L + LK+GKIS++W+ GKHTTTFS+ A P G++WV+DTPGIRVFR YG+ +LR LFP+F P +C FPNC+ Sbjct: 81 VELVLPRDNYLSKVSSSHDPREQILFANVDQLINVASVGQPGFSSNRTDRILAACEWQEIPASIVLNKVDLDARGDVEGIVETYERAGYEVIQTSA---EKREGLERLRAKLDGKTTVLYGASGVGKSTLINELY-GMKLKIGKISRFWSQGKHTTTFSR-------AIPIDGDTWVVDTPGIRVFRLYGLNKGQLRHLFPDFAPYNTKCRFPNCA 285
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A518D4I3_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D4I3_9BACT) HSP 1 Score: 235 bits (599), Expect = 1.380e-73 Identity = 126/216 (58.33%), Postives = 154/216 (71.30%), Query Frame = 1 Query: 4 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 IE V PR N LS+++S+HDPR QVLFANVD + +++S+ KPGFSSNRTDRILAACR EEIP L+LNK+DLD G + ETY AG ++ T+A EL DL L G+ S YGASGVGKSTLLNAL L LKVGKIS+YW++GKHTTTFS+ + E E G + V+DTPGIRVFR +GV +LR L+P+F P +CHFPNCS Sbjct: 81 IEEVLPRENSLSKVSSSHDPRRQVLFANVDQVILVSSLGKPGFSSNRTDRILAACRLEEIPAVLLLNKIDLDPGGEAEAIRETYTGAGYPVLETSAEQGIGLEELRDL---LHGKVSVLYGASGVGKSTLLNALY-GLQLKVGKISRYWSSGKHTTTFSRWIPIDVEGEREAG-TVVVDTPGIRVFRLWGVNRRQLRHLYPDFEPYNTKCHFPNCS 291
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A7Y5Q031_9PLAN (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5Q031_9PLAN) HSP 1 Score: 231 bits (589), Expect = 2.680e-72 Identity = 123/217 (56.68%), Postives = 149/217 (68.66%), Query Frame = 1 Query: 1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 S++AV PRRN+L R AS+HDPREQVL ANVD + ++ASV KP FSSNRTDRIL A ++P LVLNK+DLD+ G + TY G++++ T+ A EL RA L R +A YGASGVGKS+LLNAL+P L LK+GKISK+W GKHTT+FSQLHRL E G WV DTPGIR FR + PA LR +FPEF Q C FP+CS Sbjct: 63 SLDAVLPRRNRLGRTASSHDPREQVLIANVDQLCIVASVEKPKFSSNRTDRILGAALWYDVPALLVLNKVDLDRDGSVEAIARTYEGIGVDVVRTSVTAGLGVEEL---RARLKDRVTALYGASGVGKSSLLNALQPGLKLKIGKISKFWDGGKHTTSFSQLHRL------EFG-GWVADTPGIRTFRLHKADPAALRGMFPEFARFQGACRFPDCS 269
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A2E5X4L2_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X4L2_9BACT) HSP 1 Score: 230 bits (587), Expect = 6.060e-72 Identity = 123/217 (56.68%), Postives = 155/217 (71.43%), Query Frame = 1 Query: 1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 +IE V PRRN LSR+AS+HDPREQVL ANVD + ++ S+++PGFSSNRTDRILAAC EIP LVLNK DL + G + E+YA+A + ++ T AI D LA+L AAL + + YGASG GKSTLLNAL+P L+LKVGK SKYW +GKHTTTFS+LH L + G +VIDTPG+RVFR + ++ A L DLFPEF + C + +CS Sbjct: 66 AIEEVLPRRNHLSRVASSHDPREQVLVANVDQLVLVGSLSRPGFSSNRTDRILAACAWHEIPAVLVLNKTDLAREGEVEAIRESYAAARVLVLQTCAI---DGGGLAELAAALKDKVTVLYGASGAGKSTLLNALQPGLNLKVGKTSKYWKSGKHTTTFSELHPL------DMG-GFVIDTPGVRVFRLHDISRAALPDLFPEFSAFEVNCRYQDCS 272
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A518EZP8_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EZP8_9BACT) HSP 1 Score: 228 bits (581), Expect = 9.050e-71 Identity = 119/219 (54.34%), Postives = 153/219 (69.86%), Query Frame = 1 Query: 1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVE-TYASA-GIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 S+E V PRRN L R+AS+HDPREQVL ANVD +F++ S+ PGFSSNRTDRILAACR EIP LV NK DLDK+ V D TYA +E++ T+ + D + +L+A L G+ S YG SG GKS+LLNA++P L +K GKIS YW GKHTTT+S+LHR+ + G +V+DTPGIRVFRP+G+T + +RDLFP+F Q C + NC+ Sbjct: 84 SVEEVLPRRNYLGRVASSHDPREQVLVANVDQLFMVGSLKNPGFSSNRTDRILAACRWHEIPAVLVFNKADLDKKNVLMDKYRGTYAGIPDLEILVTSTV---DGRGIEELKARLRGKVSVLYGPSGAGKSSLLNAIQPGLKIKEGKISAYWKQGKHTTTYSRLHRM------DLG-GYVVDTPGIRVFRPHGLTRSHVRDLFPDFAKFQALCAYANCT 292
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A2D5W5C0_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5C0_9BACT) HSP 1 Score: 219 bits (559), Expect = 1.490e-67 Identity = 118/217 (54.38%), Postives = 149/217 (68.66%), Query Frame = 1 Query: 1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 +IE V PR N LSR+AS+HDPREQVL ANVD + ++ S+++PGFSSNRTDRILAAC EIP LVLNK DL + G + +TYA+A + ++ T A LAD L + + YGASG GKSTLLNAL+P L+LKVGK SKYW +GKHTTTFS+LH L + G +VIDTPG+RVFR + ++ A L DLFPEF + C + +CS Sbjct: 79 AIEEVLPRSNHLSRVASSHDPREQVLVANVDQLVLVGSLSRPGFSSNRTDRILAACAWHEIPAVLVLNKTDLARDGDLDAIRDTYAAAQVRVLPTCATEGHGLEALADT---LKDKVTVLYGASGAGKSTLLNALQPGLNLKVGKTSKYWKSGKHTTTFSELHAL------DMG-GFVIDTPGVRVFRLHDISRAALPDLFPEFSAFESNCRYQDCS 285
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A800N2K4_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800N2K4_9BACT) HSP 1 Score: 217 bits (553), Expect = 5.260e-67 Identity = 114/216 (52.78%), Postives = 149/216 (68.98%), Query Frame = 1 Query: 4 IEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 ++ V PR+N L RIAS+HDPREQVL ANVD + +I+S+ +P FSSNRTDRILAAC +EIP TLVLNK+DL R +++TYAS I ++ T+A++ L +LR L + S YG SG GKSTLLN ++P L+L+ G+ISKYW G+HTTT S+LH L E G +V+DTPGIR FR + V+ LRDLFP+ H + C FP+CS Sbjct: 62 VQTVLPRQNYLGRIASSHDPREQVLVANVDQLLIISSLRQPSFSSNRTDRILAACEWQEIPATLVLNKIDLIMREEIDGILKTYASVPIPVLPTSAVS---GEGLEELRTLLKDKVSVLYGPSGAGKSTLLNKIQPDLNLREGRISKYWKQGRHTTTHSRLHPL------EIG-GYVVDTPGIRAFRLFDVSARELRDLFPDIHRISSGCQFPDCS 267
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Match: A0A800G3H8_9BACT (Small ribosomal subunit biogenesis GTPase RsgA n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G3H8_9BACT) HSP 1 Score: 217 bits (552), Expect = 1.030e-66 Identity = 114/217 (52.53%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 1 SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDRILAACRHEEIPVTLVLNKLDLDKRGVTADLVETYASAGIELITTTAIADADSPELADLRAALAGRTSAFYGASGVGKSTLLNALEPALDLKVGKISKYWTAGKHTTTFSQLHRLFPEAPPETGESWVIDTPGIRVFRPYGVTPARLRDLFPEFHPLQKRCHFPNCS 651 +IE+VH RRN L R AS+HDPREQ+L AN D +F+++S+ PGFSSNRTDRIL+AC EIPV LV+NK+DL G D+ TY + IE+I T A+ D + L+ + + S YG SG GKSTL+NA++P L+L+ GKIS YW GKHTT++S L P E G WV+DTPGIRVFR +G+ LRDLFPEF +Q +C F CS Sbjct: 68 AIESVHERRNYLGRTASSHDPREQILVANADQLFIVSSLQSPGFSSNRTDRILSACIWHEIPVILVINKIDLTGAGDLEDIRRTYEAVPIEVIETCAV---DGRGVEALKDRMRDKVSVLYGPSGAGKSTLINAVQPGLNLREGKISSYWKQGKHTTSYSHL------IPLEMG-GWVVDTPGIRVFRLHGLKRNLLRDLFPEFERIQDKCRFDGCS 274 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103279.689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103279.689.1 >prot_M-pyrifera_M_contig103279.689.1 ID=prot_M-pyrifera_M_contig103279.689.1|Name=mRNA_M-pyrifera_M_contig103279.689.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp SIEAVHPRRNKLSRIASAHDPREQVLFANVDHMFVIASVAKPGFSSNRTDback to top mRNA from alignment at M-pyrifera_M_contig103279:3..653+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103279.689.1 ID=mRNA_M-pyrifera_M_contig103279.689.1|Name=mRNA_M-pyrifera_M_contig103279.689.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig103279:3..653+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103279:3..653+ >mRNA_M-pyrifera_M_contig103279.689.1 ID=mRNA_M-pyrifera_M_contig103279.689.1|Name=mRNA_M-pyrifera_M_contig103279.689.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig103279:3..653+ (Macrocystis pyrifera P11B4 male)back to top |