mRNA_M-pyrifera_M_contig103188.675.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A2E7KL88_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KL88_9PLAN) HSP 1 Score: 441 bits (1135), Expect = 1.130e-149 Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTRDRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAIQIGVVTLVCLFTTA 654 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTRDRRLVLLAIIGFLALLYT GWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAIQIGVVTLVCLFTTA Sbjct: 213 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTRDRRLVLLAIIGFLALLYTPGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAIQIGVVTLVCLFTTA 430
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A518ADR5_9PLAN (Bacterial membrane protein YfhO n=5 Tax=Gimesia TaxID=1649453 RepID=A0A518ADR5_9PLAN) HSP 1 Score: 412 bits (1059), Expect = 3.200e-138 Identity = 195/218 (89.45%), Postives = 209/218 (95.87%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTRDRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAIQIGVVTLVCLFTTA 654 QLMLLVYIPARIWFSRD TTEALKPYRRRT+ILLLLAF+STYALSAVQLAPTWELKQHSQRAEVGERSH PGYGHIPVWY++QIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAA+LLL+YGT+ GAW RDRRLVLLAIIGFLALLYT GW +PIT+H+PGFSFFTGPGRYGI+TTFAVAVIAGVCLERL+AHWKPAIQ+ VV +CLFTTA Sbjct: 213 QLMLLVYIPARIWFSRDVTTEALKPYRRRTIILLLLAFISTYALSAVQLAPTWELKQHSQRAEVGERSHHPGYGHIPVWYMTQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAAVLLLVYGTWRGAWIRDRRLVLLAIIGFLALLYTPGWFLPITKHLPGFSFFTGPGRYGILTTFAVAVIAGVCLERLVAHWKPAIQVTVVAAICLFTTA 430
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A6C941_9PLAN (Uncharacterized protein n=12 Tax=Planctomycetaceae TaxID=126 RepID=A6C941_9PLAN) HSP 1 Score: 388 bits (997), Expect = 6.560e-129 Identity = 183/218 (83.94%), Postives = 204/218 (93.58%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTRDRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAIQIGVVTLVCLFTTA 654 QLML+VYIPARIW SRDETTEALKPYRRRT+ILLL+AF+STYALSAVQLAPTWELKQ SQRAEVGERSH+PGYGHIPVWYLSQ+VAPWAWYPYEVNLDAGL GS+ATNQVEAHLYFGIA++LLLIYGT+ G WTRDRRL+LLA+IG LALLYT GWL+PIT+H+PGFSFFTGPGRYGI+TTFAVAVIAGVCLERL A+W +Q+ VV ++CLFTTA Sbjct: 213 QLMLVVYIPARIWVSRDETTEALKPYRRRTIILLLVAFISTYALSAVQLAPTWELKQLSQRAEVGERSHQPGYGHIPVWYLSQVVAPWAWYPYEVNLDAGLTAGSDATNQVEAHLYFGIASILLLIYGTWRGVWTRDRRLILLAVIGVLALLYTPGWLLPITKHLPGFSFFTGPGRYGILTTFAVAVIAGVCLERLTANWNRNLQLMVVAIICLFTTA 430
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A517RM12_9PLAN (Bacterial membrane protein YfhO n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RM12_9PLAN) HSP 1 Score: 376 bits (965), Expect = 3.380e-124 Identity = 180/218 (82.57%), Postives = 195/218 (89.45%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTRDRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAIQIGVVTLVCLFTTA 654 QLMLLVYIPARIWFSRD TE LKP RR TVILLLLA ++ Y LSAVQL PTWELKQ SQRAEVGERSH+PGYGHIPVWYLSQ+VAPWAWYPYEVNLDAGL PGS+ATNQVEAHLYFGIA +LLLIYGTF AWT DRRLVLLAIIGFLALLYT GW +P+T+H+PGFSFFTGPGRYGIVTTFAVAV+AGVCLERL+ +W IQ+ VV+LVCLFT A Sbjct: 216 QLMLLVYIPARIWFSRDNATEQLKPRRRSTVILLLLALIAAYGLSAVQLGPTWELKQLSQRAEVGERSHQPGYGHIPVWYLSQVVAPWAWYPYEVNLDAGLGPGSDATNQVEAHLYFGIATVLLLIYGTFQKAWTGDRRLVLLAIIGFLALLYTPGWFLPLTKHLPGFSFFTGPGRYGIVTTFAVAVLAGVCLERLVMNWNKMIQLVVVSLVCLFTIA 433
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A517VRN7_9PLAN (Bacterial membrane protein YfhO n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VRN7_9PLAN) HSP 1 Score: 365 bits (938), Expect = 3.700e-120 Identity = 175/218 (80.28%), Postives = 193/218 (88.53%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTRDRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAIQIGVVTLVCLFTTA 654 QLMLL YIPARIWFSRDETTE LKPYRRRT+ILLLLAF+S YALSAVQL PTWELKQ SQRAEVGERSH+PGYGHIP WY SQIVAPWAWYPYEVNLDAGLAPG++ATNQVEAHLYFGIAA++L++ GT+ AWT D RLVLLAIIG LA+LYT GW +PIT+H+PGFSFFTGPGRYGIVTTFAVAVIAGV LERL A+W ++ V +VCLFT A Sbjct: 213 QLMLLFYIPARIWFSRDETTEQLKPYRRRTIILLLLAFISAYALSAVQLGPTWELKQLSQRAEVGERSHQPGYGHIPAWYFSQIVAPWAWYPYEVNLDAGLAPGTDATNQVEAHLYFGIAAVILIVIGTWLRAWTGDPRLVLLAIIGLLAMLYTPGWFLPITKHLPGFSFFTGPGRYGIVTTFAVAVIAGVSLERLTANWNTNLKFLTVAIVCLFTIA 430
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A3E0PWK1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PWK1_9BACT) HSP 1 Score: 196 bits (498), Expect = 3.030e-55 Identity = 110/228 (48.25%), Postives = 141/228 (61.84%), Query Frame = 1 Query: 4 LMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPG-----SEATNQVEAHLYFGIAALLL----LIYGTFSGAWTRDRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWK----PAIQIGVVTLVCLFT 648 L +L Y R+ F+RD E+L R + +L A V + L+A QL PTW+LKQ SQRA+VG R H PGYGHIP WYLSQ+V PW WY +V+ D L + TN+VEAHLYFG+ L L L++ SGA T R + I+G A +YT GWL+P+TRH+PGFSFF GPGRYGIVTT AV ++AG L+RL A PA +I + ++ L T Sbjct: 194 LTVLAYAALRVTFARDRLAESLSGRGGRGMPAVLFAIVIGFGLAAPQLLPTWQLKQRSQRADVGAR-HDPGYGHIPPWYLSQVVMPWRWYAPDVDTDKMLNQKKNWSIASLTNKVEAHLYFGLVPLALAVGGLLWRAVSGAGT-PRVFQIWVILGLAATVYTTGWLLPVTRHLPGFSFFMGPGRYGIVTTLAVGLLAGYTLDRLFARKSGGVTPAGKIVIAAVIALTT 419
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A517ZU41_9PLAN (Bacterial membrane protein YfhO n=4 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZU41_9PLAN) HSP 1 Score: 192 bits (489), Expect = 5.420e-54 Identity = 98/201 (48.76%), Postives = 130/201 (64.68%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDA----GLAPGSEATNQVEAHLYFGIAALLLLIYG-TFSGAWTRDRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERL 588 QL+LL YIP R+WF+ E + R R LL A V ++L+A+QLAPTWEL+ SQR+ S GYGH+PVWY SQ+V PW WY +V+LD L P S TN+VEAHLYFG+A L++++ G F R ++ +G ALLYT GWL+P+T+++PGFSFF GPGRYGIV T A A++AG L+ + Sbjct: 202 QLVLLAYIPLRLWFTAASLPEETRALRSRCATGLLTAMVLGFSLAAIQLAPTWELRGRSQRSA----SANTGYGHMPVWYWSQVVMPWKWYRADVDLDRVLNENLPPDSAMTNKVEAHLYFGLAPLVVVLAGIVFLRRKLFSRHIIFWIGLGIAALLYTPGWLLPVTQYLPGFSFFMGPGRYGIVVTLAFALLAGTALDAI 398
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A3B8L6V7_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8L6V7_9PLAN) HSP 1 Score: 188 bits (477), Expect = 2.310e-53 Identity = 96/206 (46.60%), Postives = 129/206 (62.62%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTR--DRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAI 612 QL+L+ Y+P+R+W++ E RRR ++ ++ + L+AVQL PTWELKQ SQR V R + PGYGH+P Y SQ+V PW WY V+ + G TNQVEAHLYFG+ + LL G R D R V+ ++G LALLYT W +P+TRH+PGF FFTGPGRYGIVT A A++AG+ + L+ +PA+ Sbjct: 37 QLVLVFYVPSRLWWAGRGLPERSVSARRRLLVASVVGMGLAFGLAAVQLLPTWELKQSSQRENVTGRKYDPGYGHMPFAYWSQVVTPWRWYESGVDRVSQYDAGPADTNQVEAHLYFGLPTVGLLAVGLVGWCVGRRTDLRFVIWLVLGSLALLYTPAWHLPVTRHLPGFGFFTGPGRYGIVTALAAALLAGLAWQWLVT--RPAL 240
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A3D2U5I9_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D2U5I9_9PLAN) HSP 1 Score: 188 bits (477), Expect = 3.250e-52 Identity = 96/206 (46.60%), Postives = 129/206 (62.62%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAALLLLIYGTFSGAWTR--DRRLVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERLIAHWKPAI 612 QL+L+ Y+P+R+W++ E RRR ++ ++ + L+AVQL PTWELKQ SQR V R + PGYGH+P Y SQ+V PW WY V+ + G TNQVEAHLYFG+ + LL G R D R V+ ++G LALLYT W +P+TRH+PGF FFTGPGRYGIVT A A++AG+ + L+ +PA+ Sbjct: 213 QLVLVFYVPSRLWWAGRGLPERSVSARRRLLVASVVGMGLAFGLAAVQLLPTWELKQSSQRENVTGRKYDPGYGHMPFAYWSQVVTPWRWYESGVDRVSQYDAGPADTNQVEAHLYFGLPTVGLLAVGLVGWCVGRRTDLRFVIWLVLGSLALLYTPAWHLPVTRHLPGFGFFTGPGRYGIVTALAAALLAGLAWQWLVT--RPAL 416
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Match: A0A2E8FE03_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FE03_9PLAN) HSP 1 Score: 186 bits (472), Expect = 1.890e-51 Identity = 98/201 (48.76%), Postives = 123/201 (61.19%), Query Frame = 1 Query: 1 QLMLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTWELKQHSQRAEVGERSHKPGYGHIPVWYLSQIVAPWAWYPYEVNLDAGLAPGSEATNQVEAHLYFGIAAL-LLLIYGTFSGAWTRDRR----LVLLAIIGFLALLYTHGWLMPITRHIPGFSFFTGPGRYGIVTTFAVAVIAGVCLERL 588 QL+L Y+P R+W +R E R R + L V + L+AVQL PTWELKQ SQR V R + PGYGH+P Y +Q+VAPW WY + + + G TNQ+EAHLYFG+ + LLL+ G AW R RR L+L +G LAL YT W +PITRH+PGF FFTGPGRY IVTT +VAV+A + L Sbjct: 212 QLVLAAYVPGRLWLARQGLPETSVASRFRLLTATALTLVLAFGLAAVQLVPTWELKQASQRDNVSGRKYDPGYGHLPFAYWTQVVAPWKWYDAGFDHVSQIDAGPADTNQIEAHLYFGLPTIGLLLVAGL---AWLRQRRIDSRLMLWCGLGALALAYTPAWHLPITRHLPGFGFFTGPGRYSIVTTLSVAVLAAAAWQWL 409 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103188.675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103188.675.1 >prot_M-pyrifera_M_contig103188.675.1 ID=prot_M-pyrifera_M_contig103188.675.1|Name=mRNA_M-pyrifera_M_contig103188.675.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp MLLVYIPARIWFSRDETTEALKPYRRRTVILLLLAFVSTYALSAVQLAPTback to top mRNA from alignment at M-pyrifera_M_contig103188:1..654- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103188.675.1 ID=mRNA_M-pyrifera_M_contig103188.675.1|Name=mRNA_M-pyrifera_M_contig103188.675.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig103188:1..654- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103188:1..654- >mRNA_M-pyrifera_M_contig103188.675.1 ID=mRNA_M-pyrifera_M_contig103188.675.1|Name=mRNA_M-pyrifera_M_contig103188.675.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103188:1..654- (Macrocystis pyrifera P11B4 male)back to top |