prot_M-pyrifera_M_contig10317.670.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10317.670.1
Unique Nameprot_M-pyrifera_M_contig10317.670.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length43
Homology
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.780e-19
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLEEAHSGVF+ELAVLY+KY+PEKLMEHIKIFWSRCNVTKV
Sbjct: 1292 GLGLEEAHSGVFSELAVLYSKYSPEKLMEHIKIFWSRCNVTKV 1334          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: A0A482RYD4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYD4_9ARCH)

HSP 1 Score: 78.2 bits (191), Expect = 9.220e-16
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGL+ AHSG+FTEL +LY+KY PEKLMEHIKIFWSR NVTK+
Sbjct:  306 GLGLDHAHSGIFTELGILYSKYLPEKLMEHIKIFWSRMNVTKL 348          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: A0A8J2SD23_9STRA (Clathrin heavy chain n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SD23_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.710e-15
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGL++AHSGVFTEL VLY+KY PEKLMEHIKIFWSR N  KV
Sbjct: 1337 GLGLDQAHSGVFTELGVLYSKYVPEKLMEHIKIFWSRMNAPKV 1379          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: A0A0F7SQW9_PHARH (Clathrin heavy chain n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SQW9_PHARH)

HSP 1 Score: 77.0 bits (188), Expect = 2.340e-15
Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLE AH G+FTEL++LY+KY PEKLMEH+K+FWSRCN+ KV
Sbjct: 1306 GLGLERAHMGMFTELSILYSKYRPEKLMEHLKLFWSRCNLPKV 1348          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: A0A835YZH1_9STRA (Clathrin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.190e-15
Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLEEAHSG+FTELAVLY+KY+P+KLM HIK+FW+R N +KV
Sbjct: 1334 GLGLEEAHSGIFTELAVLYSKYSPDKLMAHIKLFWNRMNTSKV 1376          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: A0A2P7YY00_9ASCO (Clathrin heavy chain n=9 Tax=Metschnikowiaceae incertae sedis TaxID=2937349 RepID=A0A2P7YY00_9ASCO)

HSP 1 Score: 75.5 bits (184), Expect = 8.140e-15
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLE AH G+FTELA+LYTKY PEK+MEH+K+FWSR N+ KV
Sbjct: 1306 GLGLERAHMGMFTELAILYTKYKPEKVMEHLKLFWSRINIPKV 1348          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: UPI001C803B3F (Clathrin heavy chain n=1 Tax=Scheffersomyces spartinae TaxID=45513 RepID=UPI001C803B3F)

HSP 1 Score: 75.1 bits (183), Expect = 1.110e-14
Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLE AH G+FTELAVLY+KY+PEK+MEH+K+FWSR N+ KV
Sbjct: 1554 GLGLERAHMGMFTELAVLYSKYSPEKVMEHLKLFWSRINIPKV 1596          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: A0A1E4TU33_PACTA (Clathrin heavy chain n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4TU33_PACTA)

HSP 1 Score: 75.1 bits (183), Expect = 1.110e-14
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLE AH G+FTELA+LYTKY PEK MEH+K+FWSR N+ KV
Sbjct: 1305 GLGLERAHMGMFTELAILYTKYAPEKTMEHLKLFWSRINIPKV 1347          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: W6MPL8_9ASCO (Clathrin heavy chain n=1 Tax=Kuraishia capsulata CBS 1993 TaxID=1382522 RepID=W6MPL8_9ASCO)

HSP 1 Score: 75.1 bits (183), Expect = 1.110e-14
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLE AH G+FTELA+LYTKY PEK MEH+K+FWSR N+ KV
Sbjct: 1299 GLGLERAHMGMFTELAILYTKYAPEKTMEHLKLFWSRLNIPKV 1341          
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Match: G8B5B3_CANPC (Clathrin heavy chain n=3 Tax=Candida TaxID=1535326 RepID=G8B5B3_CANPC)

HSP 1 Score: 75.1 bits (183), Expect = 1.110e-14
Identity = 31/43 (72.09%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV 43
            GLGLE AH G+FTELA+LY+KY+PEK+MEH+K+FWSR N+ KV
Sbjct: 1306 GLGLERAHKGMFTELAILYSKYSPEKVMEHLKLFWSRINIPKV 1348          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10317.670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD1_ECTSI3.780e-1993.02Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A482RYD4_9ARCH9.220e-1679.07Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8J2SD23_9STRA1.710e-1581.40Clathrin heavy chain n=1 Tax=Pelagomonas calceolat... [more]
A0A0F7SQW9_PHARH2.340e-1574.42Clathrin heavy chain n=1 Tax=Phaffia rhodozyma Tax... [more]
A0A835YZH1_9STRA3.190e-1576.74Clathrin heavy chain n=1 Tax=Tribonema minus TaxID... [more]
A0A2P7YY00_9ASCO8.140e-1574.42Clathrin heavy chain n=9 Tax=Metschnikowiaceae inc... [more]
UPI001C803B3F1.110e-1474.42Clathrin heavy chain n=1 Tax=Scheffersomyces spart... [more]
A0A1E4TU33_PACTA1.110e-1474.42Clathrin heavy chain n=1 Tax=Pachysolen tannophilu... [more]
W6MPL8_9ASCO1.110e-1474.42Clathrin heavy chain n=1 Tax=Kuraishia capsulata C... [more]
G8B5B3_CANPC1.110e-1472.09Clathrin heavy chain n=3 Tax=Candida TaxID=1535326... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..43
e-value: 1.7E-13
score: 52.1
NoneNo IPR availablePANTHERPTHR10292CLATHRIN HEAVY CHAIN RELATEDcoord: 1..43
NoneNo IPR availablePANTHERPTHR10292:SF1CLATHRIN HEAVY CHAINcoord: 1..43
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPROSITEPS50236CHCRcoord: 1..43
score: 14.611
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10317contigM-pyrifera_M_contig10317:10351..10479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10317.670.1mRNA_M-pyrifera_M_contig10317.670.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10317 10351..10479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10317.670.1 ID=prot_M-pyrifera_M_contig10317.670.1|Name=mRNA_M-pyrifera_M_contig10317.670.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=43bp
GLGLEEAHSGVFTELAVLYTKYTPEKLMEHIKIFWSRCNVTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR000547Clathrin_H-chain/VPS_repeat
IPR016024ARM-type_fold