prot_M-pyrifera_M_contig103138.657.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103138.657.1
Unique Nameprot_M-pyrifera_M_contig103138.657.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length196
Homology
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A1Y1IFU1_KLENI (E3 ubiquitin-protein ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFU1_KLENI)

HSP 1 Score: 100 bits (250), Expect = 3.310e-21
Identity = 75/207 (36.23%), Postives = 108/207 (52.17%), Query Frame = 0
Query:    9 VQERSMPFLRCTALLHSALFVSTLPVSDRPA--GELLDFL---KLAVAAPVPAFIENWSSGEHWRLAEASHCSVPPCAPV-------------KSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCR-DVVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKEL 195
            VQ   +PFLR  A+L   +     PVS   A  G+L+ +    +     PVP+ ++         +A  S   +PP APV             K V LP +FQ+ +      K  C RC  +P+ PA+CLLCGT+VC  S CC  +  GEC+ H AE CG    +FL+L+S+++++LR G   CM  S Y+D +GEED  + RG+ L
Sbjct: 1515 VQAALVPFLRRAAILVHVVSGRLPPVSGPGALDGDLMSYQYWERYLGLPPVPSVLQAMG------IAPPSKQVMPPTAPVVPRHLLLSGRAQLKLVDLPDVFQELLLAEMNRK--CGRCGTVPREPALCLLCGTLVCCKSQCCHVEGRGECSRHAAE-CGMGIGIFLLLRSTQMLILR-GDRACMAPSIYLDVHGEEDAFLKRGRPL 1711          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A507DBV2_9FUNG (E3 ubiquitin-protein ligase n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DBV2_9FUNG)

HSP 1 Score: 99.4 bits (246), Expect = 1.160e-20
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 0
Query:   71 EASHCSVPPCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV--GECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 193
            + S  S+P  +P   + LP  F+    L    +  C +CK +P  PA+CLLCG  +C+ S CC D    GECN H+ E CG D  VFL+++ + +M+LR+   GCM  SPY+D +GEED  + RGK
Sbjct: 1953 QLSTMSLPSPSPFTLISLP--FRGEALLQESIRRVCPQCKTVPPEPAICLLCGATICVQSMCCMDDQNRGECNQHIIE-CGKDVGVFLIMKRAAIMVLRSNGRGCMLNSPYLDAHGEEDPGLRRGK 2075          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: S7S5H9_GLOTA (E3 ubiquitin-protein ligase n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7S5H9_GLOTA)

HSP 1 Score: 97.8 bits (242), Expect = 3.890e-20
Identity = 67/198 (33.84%), Postives = 99/198 (50.00%), Query Frame = 0
Query:   13 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSG-----EHWRLAEASHCSVPPCAP-VKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV---GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 193
            ++PFLR  A+L  A+  S  P       E  ++ +L V   +P          ++N  SG      H ++A   +  V    P +  +    L  D +F        CTRCK +P   A+CL+CGT+VCL S CC D+    GECNIH  E  G+  ++ +++   V+ L AGS G  Q  PY+D +GE DV+M RG+
Sbjct: 1549 TLPFLRRAAILCRAVLPSAYPTPTFEGEEPSEYRRLLVMLGIPPLSDLPKQDTLQNCLSGWCAHYGHSQVASQFNFGVTLEYPTIYRIAQLPLILDNLFGDHEKVMTCTRCKAVPADAAICLICGTVVCLQSHCCWDLDAKRGECNIHTRECGGAIGLYFLVKRCSVLYLYAGS-GAFQSPPYLDVHGEVDVSMRRGR 1745          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A507CIW2_9FUNG (E3 ubiquitin-protein ligase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CIW2_9FUNG)

HSP 1 Score: 97.8 bits (242), Expect = 3.940e-20
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 0
Query:   71 EASHCSVPPCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRD---VVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 193
            + S  S+P   P   V LP   +    L   ++  C  CK +P  PA+CLLCGT VC+ S CC +   V GECN H+   CG D  VFL+++ + VM+LR+ + GCM  SPY+D +GEED    RGK
Sbjct: 1964 DQSAMSLPSPLPFTLVTLPR--RGEALLQESTRRICPNCKTLPSEPAICLLCGTTVCVQSMCCMETDSVRGECNSHLFH-CGRDLGVFLIIKRAAVMVLRSNNRGCMVNSPYLDAHGEEDPGFRRGK 2087          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A8H7D122_9AGAR (E3 ubiquitin-protein ligase n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7D122_9AGAR)

HSP 1 Score: 95.1 bits (235), Expect = 3.450e-19
Identity = 60/199 (30.15%), Postives = 99/199 (49.75%), Query Frame = 0
Query:   13 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSGEHWRLAEASHCSVPPCAPVKSVCLPSLFQ--------DFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV--GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 193
            ++PFLR  A+L  ++  S  P    P  ++ ++ +L     VPA         ++N  SG      ++   S   C  V     PS+++        D +F  +     C RC  +P   A+CLLCGT VC+ S CCRD    GECN+H+ E  G+  V+ +++   ++ +  G++G     PY+D +GE D++M RG+
Sbjct: 1534 TLPFLRRAAILCRSVLPSCFPTPPSPGNDVCEYNRLLTLLNVPALSDLPNQDTLQNALSGWCAHYGQSHAASQLNCGVVLD--FPSMYRLARLPLVLDTLFGAQDRALTCQRCATVPVDAAICLLCGTTVCMQSDCCRDEDDRGECNVHLRECGGAIGVYFLVKRCMLLYIY-GNNGTFSPPPYLDAHGEVDISMRRGR 1729          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A8H6YVL6_9AGAR (E3 ubiquitin-protein ligase n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6YVL6_9AGAR)

HSP 1 Score: 94.4 bits (233), Expect = 6.180e-19
Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 0
Query:   13 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSG-----EHWRLAEASHCSVPPCAP--VKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV---GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 193
            ++PFLR  A+L  ++  S  P    P G++ ++ +L     VPA         ++N  SG      H   A   +C V    P   +   LP L  D +F  +     C RC  +P   A+CLLCGT VC+ S CCRD     GECN+HM E  G+  V+ +++   ++ + + ++G     PY+D +GE D++M RG+
Sbjct: 1515 TLPFLRRAAILCRSVLPSCFPTPPSPGGDVCEYNRLLTLLNVPALSDLPNQDTLQNALSGWCAHYGHSHAASQLNCGVILDFPSMYRLARLP-LVLDNLFGAQDRALTCQRCTTVPVDAAICLLCGTTVCMQSDCCRDEDNERGECNLHMRECGGAIGVYYLVKRCMLLYIYS-NNGTFSPPPYLDAHGEVDISMRRGR 1711          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A835V573_VANPL (E3 ubiquitin-protein ligase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835V573_VANPL)

HSP 1 Score: 92.4 bits (228), Expect = 2.610e-18
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 0
Query:   79 PCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLN-SGCCRDVVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKELH 196
            P  P K + LP L+QD   L R+ K +C  C+ IP+ PA+CLLCG +   N   CCR     C  H A  CG+   VFL+++ + +++ R+ S   +  SPY+D++GEEDV+MSRGK LH
Sbjct:  671 PAVPFKLMQLPGLYQDL--LQRYVKLKCPECESIPEAPALCLLCGKLCSTNLKPCCR--ASRCLNH-ANSCGAGIGVFLLVRKTTILLQRS-SRQALWPSPYLDDFGEEDVDMSRGKPLH 784          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A2G5B6S6_COERN (E3 ubiquitin-protein ligase n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B6S6_COERN)

HSP 1 Score: 92.4 bits (228), Expect = 2.880e-18
Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = 0
Query:   58 IENWSSGEHWRLAEASHCSVPP----CAPVKSVCLPSLFQDFVFLP--------RFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCR-DVVGECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKEL 195
            +E W S    R+    H S       C     V +P+L+   V LP        R +K  C RC G+P  PA+CLLCG+ VC  S CC  D VGECN+HM    G+  V+L+++   +++L    +GC   +PY+D++GE D+ + RG+ L
Sbjct: 1618 VEGWLS--ELRMFRRRHTSPMSLGAGCTMAVPVAMPTLYS-LVDLPDRFEILFERSAKSFCPRCNGVPSDPALCLLCGSFVCAQSFCCEEDGVGECNMHMKTCGGTVGVYLLVKKCGLLLLHH-DNGCFMSAPYLDQHGEVDLGLKRGRPL 1764          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A835R9A8_VANPL (E3 ubiquitin-protein ligase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R9A8_VANPL)

HSP 1 Score: 92.4 bits (228), Expect = 2.910e-18
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 0
Query:   79 PCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLN-SGCCRDVVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKELH 196
            P  P K + LP L+QD   L R+ K +C  C+ IP+ PA+CLLCG +   N   CCR     C  H A  CG+   VFL+++ + +++ R+ S   +  SPY+D++GEEDV+MSRGK LH
Sbjct: 1916 PAVPFKLMQLPGLYQDL--LQRYVKLKCPECESIPEAPALCLLCGKLCSTNLKPCCR--ASRCLNH-ANSCGAGIGVFLLVRKTTILLQRS-SRQALWPSPYLDDFGEEDVDMSRGKPLH 2029          
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A5C3L5X4_9AGAR (E3 ubiquitin-protein ligase n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3L5X4_9AGAR)

HSP 1 Score: 92.0 bits (227), Expect = 3.960e-18
Identity = 63/201 (31.34%), Postives = 95/201 (47.26%), Query Frame = 0
Query:   13 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSGEHWRLAEASHCSVPPCAPVKSVCLPSLFQ--------DFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV----GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 193
            ++PFLR  A+L  ++  +  P     A    ++ +L     +P          ++N  SG           S  PC  V S+  P  ++        D +F        CTRC  IP   A+CLLCGT+VCL SGCC D      GECN+H  E  G   ++ +++   ++ L AG+ G    SPY+D +GE D++M RG+
Sbjct: 1814 TLPFLRRAAILCRSILPTAFPTPTFGANPPCEYTRLLKLLGIPPLSDLPNQDTLQNALSGWCAHYGHTLTLSQIPC--VVSLDFPGFYRLARLPLVLDNMFQVSEKALTCTRCNTIPLDGAVCLLCGTMVCLQSGCCVDTDYNNRGECNMHTRECGGMVGIYYLVKRGTLLYLNAGN-GTFHPSPYLDAHGEADLSMRRGR 2011          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1IFU1_KLENI3.310e-2136.23E3 ubiquitin-protein ligase n=1 Tax=Klebsormidium ... [more]
A0A507DBV2_9FUNG1.160e-2042.06E3 ubiquitin-protein ligase n=2 Tax=Synchytrium en... [more]
S7S5H9_GLOTA3.890e-2033.84E3 ubiquitin-protein ligase n=1 Tax=Gloeophyllum t... [more]
A0A507CIW2_9FUNG3.940e-2043.31E3 ubiquitin-protein ligase n=1 Tax=Synchytrium mi... [more]
A0A8H7D122_9AGAR3.450e-1930.15E3 ubiquitin-protein ligase n=1 Tax=Mycena sanguin... [more]
A0A8H6YVL6_9AGAR6.180e-1932.16E3 ubiquitin-protein ligase n=1 Tax=Mycena venus T... [more]
A0A835V573_VANPL2.610e-1843.33E3 ubiquitin-protein ligase n=1 Tax=Vanilla planif... [more]
A0A2G5B6S6_COERN2.880e-1836.42E3 ubiquitin-protein ligase n=1 Tax=Coemansia reve... [more]
A0A835R9A8_VANPL2.910e-1843.33E3 ubiquitin-protein ligase n=1 Tax=Vanilla planif... [more]
A0A5C3L5X4_9AGAR3.960e-1831.34E3 ubiquitin-protein ligase n=1 Tax=Coprinopsis ma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 8..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103138contigM-pyrifera_M_contig103138:2..589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103138.657.1mRNA_M-pyrifera_M_contig103138.657.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103138 2..589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103138.657.1 ID=prot_M-pyrifera_M_contig103138.657.1|Name=mRNA_M-pyrifera_M_contig103138.657.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp
LGASWAKEVQERSMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAV
AAPVPAFIENWSSGEHWRLAEASHCSVPPCAPVKSVCLPSLFQDFVFLPR
FSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVVGECNIHMAEKCGS
DCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKELH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like