prot_M-pyrifera_M_contig103070.652.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103070.652.1
Unique Nameprot_M-pyrifera_M_contig103070.652.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length169
Homology
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BLAST of mRNA_M-pyrifera_M_contig103070.652.1 vs. uniprot
Match: A0A7C2SMT5_9DELT (Tetratricopeptide repeat protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2SMT5_9DELT)

HSP 1 Score: 60.5 bits (145), Expect = 1.430e-7
Identity = 55/152 (36.18%), Postives = 74/152 (48.68%), Query Frame = 0 
Query:   22 DEAIAALEAITQRMPDFLDARVQ-----LIGMYVDAGRHDSAQAAASSLLREHPGEARTHNLLGVVMMARGRRDEAAKQFASARELEPDATLAILNQARLARLGDRLEAAAALYRETLKREPAAADARLELAQVLLAGGDPGAATQVIEPLL 168
            DEA+  L A   R  D  DA+ +     L+ +   AGR   A A  S L    P  A  H L G V++A GRR+EAA  + +A   +P A  A+  +AR+ R   RL  A AL+  T K   A      E AQ +LA GD   A + +E L+
Sbjct:  645 DEAVKLLRA---RKSDLGDAKYEPALRALVELERTAGRTPQALALLSDLAAGRPDAAPLHALRGDVLLADGRREEAAAAYEAALRADPAAPAALAGKARVLRAEGRLADAVALFDRTPKGA-AGGQYEYEAAQAVLASGDEAGARKRLEELV 792
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103070.652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7C2SMT5_9DELT1.430e-736.18Tetratricopeptide repeat protein n=1 Tax=Deltaprot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14559TPR_19coord: 16..79
e-value: 2.8E-9
score: 37.3
NoneNo IPR availablePFAMPF13432TPR_16coord: 112..160
e-value: 2.3E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR16026CARTILAGE ACIDIC PROTEIN 1coord: 53..168
NoneNo IPR availablePANTHERPTHR16026:SF5coord: 53..168
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..169
e-value: 8.4E-26
score: 92.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 14..167
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 73..106
score: 9.765
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 107..140
score: 5.399
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..169
score: 23.543

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103070contigM-pyrifera_M_contig103070:134..640 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103070.652.1mRNA_M-pyrifera_M_contig103070.652.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103070 134..640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103070.652.1 ID=prot_M-pyrifera_M_contig103070.652.1|Name=mRNA_M-pyrifera_M_contig103070.652.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
APEQVGFALGLSASRFAAGKVDEAIAALEAITQRMPDFLDARVQLIGMYV
DAGRHDSAQAAASSLLREHPGEARTHNLLGVVMMARGRRDEAAKQFASAR
ELEPDATLAILNQARLARLGDRLEAAAALYRETLKREPAAADARLELAQV
LLAGGDPGAATQVIEPLLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR013026TPR-contain_dom