mRNA_M-pyrifera_M_contig103069.651.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103069.651.1
Unique NamemRNA_M-pyrifera_M_contig103069.651.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7C3A2P0_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3A2P0_9BACT)

HSP 1 Score: 291 bits (744), Expect = 3.840e-94
Identity = 156/217 (71.89%), Postives = 183/217 (84.33%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTN-QVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TIGLC+VQS+ IA+FLQS G EIVP PGIGFIL+C+++FTTGTAFIMWLGEQISE GIGNGISLIIFTSIIS MPAA+ +L+ +I  + Q+N+F G+ LVFLMV+VV GAIL+TTGQRR+PVQYPRQV+GRRV GGQR+YLPLRVNQAGVIPIIFASSLL LPG +   +    L  IINQ+  P  + +  LYAILI+FF FFYTAITFNPVE+AD
Sbjct:  121 TIGLCIVQSIGIAVFLQSLGTEIVPRPGIGFILMCIISFTTGTAFIMWLGEQISEQGIGNGISLIIFTSIISRMPAALRSLVSLIFVSEQINMFQGLFLVFLMVLVVAGAILITTGQRRIPVQYPRQVKGRRVSGGQRTYLPLRVNQAGVIPIIFASSLLSLPGTIGSAIKIPQLEWIINQMFHPGNVGYMALYAILIIFFGFFYTAITFNPVEVAD 337          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A831UND1_9BACT (Preprotein translocase subunit SecY (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831UND1_9BACT)

HSP 1 Score: 276 bits (707), Expect = 1.050e-89
Identity = 143/219 (65.30%), Postives = 181/219 (82.65%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQS---QGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TI LC+VQS+ IA +LQS   +GP IVPNPG+GF+L+CV++FTTGTAFIMWLGE+ISEHGIGNGISLIIF SI+S MP A+ N++RM+  +++ IF   +++ L+V VV GAILVTTGQRR+PVQYPRQV+GR+V GGQR+YLPLRVNQAGVIPIIFASSLLMLPG LA+ +    + +   +   P+ +++NI   +LI+FFSFFYTAITFNPVE+AD
Sbjct:  122 TIVLCIVQSIGIAFYLQSIESRGPAIVPNPGLGFVLMCVISFTTGTAFIMWLGERISEHGIGNGISLIIFVSIVSRMPFAMFNVLRMVRQDELQIFQAGIMIILLVAVVAGAILVTTGQRRIPVQYPRQVKGRKVFGGQRNYLPLRVNQAGVIPIIFASSLLMLPGFLAKAVTFPAVRVFFEEWFRPNGILYNIATGVLIIFFSFFYTAITFNPVEMAD 340          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A847GA43_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GA43_9BACT)

HSP 1 Score: 273 bits (697), Expect = 4.550e-87
Identity = 136/216 (62.96%), Postives = 180/216 (83.33%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TI LC+VQS+ I ++LQS G +IVPNPG+GF+LL ++T TTGTAF+MW+GEQISEHGIGNGISL+IF  I++ MP+++ N+ RMIG +Q++    ++LV +MV+VV GAI+VTTGQRR+PVQYPRQ++GR + GG R+YLPLRVNQAGVIPIIFASS+LMLPG +AQN+    +   +N + +P  + +N++YA LI+FFSFFYTAITFNPVE+AD
Sbjct:  122 TIALCIVQSIGIGVYLQSMGRQIVPNPGVGFLLLSIITLTTGTAFLMWIGEQISEHGIGNGISLLIFVGIVADMPSSVRNVFRMIGNDQMSPILAVMLVGVMVLVVAGAIMVTTGQRRIPVQYPRQIKGRGMTGGTRTYLPLRVNQAGVIPIIFASSILMLPGSIAQNIKIPFIEYWVNWLFNPYGIPYNLIYAGLIIFFSFFYTAITFNPVEMAD 337          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7V2Y704_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y704_9BACT)

HSP 1 Score: 270 bits (690), Expect = 5.020e-86
Identity = 140/216 (64.81%), Postives = 177/216 (81.94%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TIGLC++QSV I MFLQ+QG +IV NPGIGF+L+CV++FTTGTAFIMW+GE+ISE+G+GNGISLIIF SI S +P AI+ + +MIG +Q++IF  ++LV L+ +VV GAI +TTGQRR+PVQYPRQV+GR+V GGQR+YLPLRVNQAGVIPIIFASS+LMLPGML   +    +   I      +   +N +Y ILI+FFS+FYTAITFNPVE+AD
Sbjct:  121 TIGLCIIQSVGIGMFLQNQGEDIVANPGIGFLLMCVISFTTGTAFIMWVGERISENGLGNGISLIIFISIASRLPNAIIRIFQMIGQSQLSIFQALILVALLGIVVAGAIWITTGQRRIPVQYPRQVKGRKVFGGQRNYLPLRVNQAGVIPIIFASSILMLPGMLHGAIAIPAIDDFITNWFDYNGFFYNAIYVILIIFFSYFYTAITFNPVEIAD 336          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7C3WZJ7_9BACT (Protein translocase subunit SecY n=2 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3WZJ7_9BACT)

HSP 1 Score: 259 bits (663), Expect = 6.160e-82
Identity = 138/217 (63.59%), Postives = 172/217 (79.26%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTN-QVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TI LC++QS+ I+ FLQ  G EIVPNPG  FI  CV++FTTG AF+MW+GEQISE GIGNG+SLIIFTSI+S MPAA+ +L++++  + Q+N+F  +VLVFLMV V+ GAI +TTGQRR+PVQYPRQV+GRRV GGQ++YLPLRVNQAGVIPIIFASS+L LP  L   +    +  II Q+  P  + + I Y  LI+FFSFFYTAITFNPVE+AD
Sbjct:  121 TIVLCIIQSIGISWFLQGLGREIVPNPGPMFIFTCVLSFTTGAAFVMWIGEQISEFGIGNGMSLIIFTSIVSRMPAALRHLVQLVFVSKQLNMFQALVLVFLMVAVIAGAIAITTGQRRIPVQYPRQVKGRRVSGGQKTYLPLRVNQAGVIPIIFASSILSLPAYLGDTIRIPIIEQIIRQLFYPGNIGYAICYGGLIIFFSFFYTAITFNPVEIAD 337          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7C1CKX6_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1CKX6_9BACT)

HSP 1 Score: 259 bits (663), Expect = 6.690e-82
Identity = 138/220 (62.73%), Postives = 171/220 (77.73%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNS----GTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TIGLC+VQSV +A+FLQ  G EIVPNPGI FI L ++T T GTAFIMWLGEQI+EHGIGNGISLIIF  I++ MP AI NL+ ++   ++++   +VL F+MV V+ GAI++TTGQRR+PVQYPRQV+G+RV GGQR+YLPLRVNQAGVIPIIFASS+LMLP  L +N+        L   IN   +P   ++N +YAILI+FFSFFYTA TF P E+AD
Sbjct:  121 TIGLCIVQSVGMAIFLQGLGREIVPNPGIFFIALTMITMTAGTAFIMWLGEQITEHGIGNGISLIIFVGIVAGMPTAITNLLSLMRNGRISMAMALVLAFMMVFVIAGAIVITTGQRRIPVQYPRQVKGKRVSGGQRTYLPLRVNQAGVIPIIFASSILMLPEALLRNIRIPEGWNWLETGINMAMNPMGFIYNAIYAILIIFFSFFYTASTFRPAEMAD 340          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A1V5YXN7_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YXN7_9BACT)

HSP 1 Score: 251 bits (641), Expect = 1.250e-78
Identity = 134/217 (61.75%), Postives = 171/217 (78.80%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLN-SGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TI LC+VQS+ IA++LQS GP IVP+ G+ FI L ++T T GT+FIMWLGEQI+EHGIGNG+SLIIFT I+S MP AI N+  ++ T+Q++I   +VL F+MV VV GAI+VTTGQRR+PVQYP+ V  RRV GGQR+YLPLRVNQAGVIPIIFASS+LMLP  L ++L+  G L   +    +P  +++N +YA+LI+FFSFFYTA TF P E+AD
Sbjct:  121 TIFLCIVQSIGIAVYLQSMGPTIVPHSGVFFIALTMITLTAGTSFIMWLGEQITEHGIGNGMSLIIFTGIVSGMPRAISNMFNLLRTDQISIAVVLVLAFMMVFVVAGAIIVTTGQRRIPVQYPKVVNQRRVSGGQRTYLPLRVNQAGVIPIIFASSILMLPDALVRSLHVPGWLETPLAIALNPQGVIYNAVYALLIIFFSFFYTASTFRPAEMAD 337          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7Z9LNQ5_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9LNQ5_9BACT)

HSP 1 Score: 250 bits (638), Expect = 3.830e-78
Identity = 132/221 (59.73%), Postives = 175/221 (79.19%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVP-----NPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TI +C+VQS+A+A FL S      P     NPG+ F LLCV++FTTGTAFIMW+GEQISEHGIGNG+SLIIF SII+ MP A++NL+R+I T +++IF   +L+ + V VV G ILVTTGQRR+P+QYPRQV+GR VMG QRSYLPL+VNQAGVIPIIFASSLLM+P MLA  ++   ++ I  +  +    +++++++++I+FFSFFYTAITFNP+E+AD
Sbjct:  121 TIAICIVQSLALAKFLLSMNEGSEPILVWENPGVPFYLLCVLSFTTGTAFIMWVGEQISEHGIGNGMSLIIFASIIAGMPNAMINLLRLIDTGEISIFKFGILMAVFVFVVGGTILVTTGQRRIPIQYPRQVKGRAVMGNQRSYLPLKVNQAGVIPIIFASSLLMIPNMLASTVDVPIVSKIFGEWLAQGTWMYSLVFSVMILFFSFFYTAITFNPIEMAD 341          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A2A5DC72_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5DC72_9BACT)

HSP 1 Score: 250 bits (639), Expect = 5.440e-78
Identity = 134/221 (60.63%), Postives = 171/221 (77.38%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPEIVP-----NPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TIGLC+VQ++ + +FL+       P     +PG+GF LLC+++FTTGTAF+MWLGEQISEHGIGNGIS+IIF SIIS MPAA+ NL+R+I + +V+IF   +L+ + V VV G I+VT GQRR+PVQYPRQV+GR+V G QR+YLPLRVNQAGVIPIIFASSLLM+PGM+A N++   +  I        Q  ++  +A +IVFFSFFYTAITFNPVE+AD
Sbjct:  146 TIGLCVVQAIGVGVFLKGMNTPDAPILMFADPGLGFYLLCILSFTTGTAFLMWLGEQISEHGIGNGISVIIFASIISGMPAAMANLLRLINSGEVSIFKFGILMAVFVFVVAGTIMVTVGQRRIPVQYPRQVKGRQVSGSQRNYLPLRVNQAGVIPIIFASSLLMIPGMVATNIDVPIIQTIFVDWFGYGQWPYSAAFAAMIVFFSFFYTAITFNPVEIAD 366          
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7Y5C967_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C967_9BACT)

HSP 1 Score: 241 bits (614), Expect = 1.530e-74
Identity = 129/220 (58.64%), Postives = 165/220 (75.00%), Query Frame = 1
Query:    1 TIGLCLVQSVAIAMFLQSQGPE----IVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648
            TI LC++QS+ +A FL+    +    IV + GIGF ++C+V FTTGTAFIMWLGEQISE+GIGNG+SLIIF  I +S+PAA+++L  ++ T Q++    + L   MVVVV G IL+TT QRR+PVQYPRQV+GR++ GG R+YLPLRVNQAGVIPIIFASSLLMLPGML   LNS  +        +     +NI YA+LI+FF FFYTAITFNP+E+A+
Sbjct:  121 TIALCIIQSIGVATFLRGMNAQSEVPIVTSTGIGFYIICIVAFTTGTAFIMWLGEQISEYGIGNGMSLIIFAGIAASLPAALMDLATLLRTRQISWIAVLFLFAAMVVVVAGVILITTAQRRIPVQYPRQVKGRKMTGGARTYLPLRVNQAGVIPIIFASSLLMLPGMLGSALNSPAIDRFFETYFAWHGWAYNITYAVLIMFFCFFYTAITFNPIEMAE 340          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3A2P0_9BACT3.840e-9471.89Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A831UND1_9BACT1.050e-8965.30Preprotein translocase subunit SecY (Fragment) n=1... [more]
A0A847GA43_9BACT4.550e-8762.96Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A7V2Y704_9BACT5.020e-8664.81Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A7C3WZJ7_9BACT6.160e-8263.59Protein translocase subunit SecY n=2 Tax=Candidatu... [more]
A0A7C1CKX6_9BACT6.690e-8262.73Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A1V5YXN7_9BACT1.250e-7861.75Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A7Z9LNQ5_9BACT3.830e-7859.73Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A2A5DC72_9BACT5.440e-7860.63Protein translocase subunit SecY n=1 Tax=Candidatu... [more]
A0A7Y5C967_9BACT1.530e-7458.64Protein translocase subunit SecY n=1 Tax=Candidatu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103069contigM-pyrifera_M_contig103069:5..652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score197.6
Seed ortholog evalue6e-48
Seed eggNOG ortholog1379698.RBG1_1C00001G1576
Preferred namesecY
KEGG koko:K03076
KEGG TC3.A.5
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categorysignal peptide
GOsGO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680
EggNOG free text desc.The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
EggNOG OGs2NNVK@2323,COG0201@1,COG0201@2
COG Functional cat.U
Best tax levelunclassified Bacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Exons1
Model size648
Cds size648
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815535.4925783-CDS-M-pyrifera_M_contig103069:4..6521622815535.4925783-CDS-M-pyrifera_M_contig103069:4..652Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103069 5..652 +
1692277453.4580584-CDS-M-pyrifera_M_contig103069:4..6521692277453.4580584-CDS-M-pyrifera_M_contig103069:4..652Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103069 5..652 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103069.651.1prot_M-pyrifera_M_contig103069.651.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103069 5..652 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103069.651.1

>prot_M-pyrifera_M_contig103069.651.1 ID=prot_M-pyrifera_M_contig103069.651.1|Name=mRNA_M-pyrifera_M_contig103069.651.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLG
EQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVF
LMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVI
PIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFF
SFFYTAITFNPVELAD
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mRNA from alignment at M-pyrifera_M_contig103069:5..652+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103069.651.1 ID=mRNA_M-pyrifera_M_contig103069.651.1|Name=mRNA_M-pyrifera_M_contig103069.651.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103069:5..652+ (Macrocystis pyrifera P11B4 male)
ACGATCGGGCTGTGTCTGGTTCAGAGTGTGGCTATTGCGATGTTCCTCCA GAGCCAGGGCCCGGAAATCGTGCCGAATCCCGGTATCGGTTTCATCCTGT TGTGCGTGGTGACGTTTACGACGGGTACTGCCTTTATCATGTGGCTCGGT GAGCAGATTAGTGAACACGGTATCGGCAACGGTATCTCGTTAATCATCTT TACCAGTATCATCTCGTCAATGCCAGCCGCTATCGTCAACCTGATTCGGA TGATTGGCACCAACCAGGTGAACATTTTCACCGGTATCGTGTTGGTCTTC CTCATGGTGGTCGTGGTGATGGGTGCTATCCTGGTAACCACGGGACAGCG TCGGGTGCCGGTGCAGTATCCTCGTCAGGTGCGTGGACGCCGGGTGATGG GTGGACAACGGTCCTACCTCCCACTCCGTGTTAACCAGGCCGGTGTTATC CCGATTATCTTCGCGAGTTCCCTGCTGATGCTTCCGGGCATGTTGGCTCA GAATCTCAACAGCGGTACGCTGGCGCTGATTATCAATCAGATTGCCAGTC CCGACCAGCTCGTGCATAACATACTCTATGCGATACTGATTGTGTTCTTC TCCTTCTTCTACACGGCGATCACCTTTAATCCCGTGGAGTTGGCAGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103069:5..652+

>mRNA_M-pyrifera_M_contig103069.651.1 ID=mRNA_M-pyrifera_M_contig103069.651.1|Name=mRNA_M-pyrifera_M_contig103069.651.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103069:5..652+ (Macrocystis pyrifera P11B4 male)
ACGATCGGGCTGTGTCTGGTTCAGAGTGTGGCTATTGCGATGTTCCTCCA
GAGCCAGGGCCCGGAAATCGTGCCGAATCCCGGTATCGGTTTCATCCTGT
TGTGCGTGGTGACGTTTACGACGGGTACTGCCTTTATCATGTGGCTCGGT
GAGCAGATTAGTGAACACGGTATCGGCAACGGTATCTCGTTAATCATCTT
TACCAGTATCATCTCGTCAATGCCAGCCGCTATCGTCAACCTGATTCGGA
TGATTGGCACCAACCAGGTGAACATTTTCACCGGTATCGTGTTGGTCTTC
CTCATGGTGGTCGTGGTGATGGGTGCTATCCTGGTAACCACGGGACAGCG
TCGGGTGCCGGTGCAGTATCCTCGTCAGGTGCGTGGACGCCGGGTGATGG
GTGGACAACGGTCCTACCTCCCACTCCGTGTTAACCAGGCCGGTGTTATC
CCGATTATCTTCGCGAGTTCCCTGCTGATGCTTCCGGGCATGTTGGCTCA
GAATCTCAACAGCGGTACGCTGGCGCTGATTATCAATCAGATTGCCAGTC
CCGACCAGCTCGTGCATAACATACTCTATGCGATACTGATTGTGTTCTTC
TCCTTCTTCTACACGGCGATCACCTTTAATCCCGTGGAGTTGGCAGACAC
GATCGGGCTGTGTCTGGTTCAGAGTGTGGCTATTGCGATGTTCCTCCAGA
GCCAGGGCCCGGAAATCGTGCCGAATCCCGGTATCGGTTTCATCCTGTTG
TGCGTGGTGACGTTTACGACGGGTACTGCCTTTATCATGTGGCTCGGTGA
GCAGATTAGTGAACACGGTATCGGCAACGGTATCTCGTTAATCATCTTTA
CCAGTATCATCTCGTCAATGCCAGCCGCTATCGTCAACCTGATTCGGATG
ATTGGCACCAACCAGGTGAACATTTTCACCGGTATCGTGTTGGTCTTCCT
CATGGTGGTCGTGGTGATGGGTGCTATCCTGGTAACCACGGGACAGCGTC
GGGTGCCGGTGCAGTATCCTCGTCAGGTGCGTGGACGCCGGGTGATGGGT
GGACAACGGTCCTACCTCCCACTCCGTGTTAACCAGGCCGGTGTTATCCC
GATTATCTTCGCGAGTTCCCTGCTGATGCTTCCGGGCATGTTGGCTCAGA
ATCTCAACAGCGGTACGCTGGCGCTGATTATCAATCAGATTGCCAGTCCC
GACCAGCTCGTGCATAACATACTCTATGCGATACTGATTGTGTTCTTCTC
CTTCTTCTACACGGCGATCACCTTTAATCCCGTGGAGTTGGCAGAC
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