mRNA_M-pyrifera_M_contig103066.649.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A2D4BKG9_PYTIN (U3 small nucleolar RNA-associated protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKG9_PYTIN) HSP 1 Score: 87.4 bits (215), Expect = 2.990e-17 Identity = 56/147 (38.10%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 1 QGAEDELVRDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGD-FQLASAGATGDSTLRFWSLTEQAQ 438 Q EDE ++ AV P L T + L LR WDL LR+I+ H++ V S+ F PSG L+ATGG+DRAV V+DV G+ TH FR HSG+V V + D +L A+ D+T+R W L Q++ Sbjct: 71 QDVEDEEQKESFVVFAVRPGHNQLVTAGRNLLLRLWDLETFTC--------------LRTIK----AHQTPVLSLDFDPSGTLLATGGSDRAVKVFDVDKGYCTHNFRRHSGIVTLVQFHPDPKRLLLVSASDDATVRLWDLYAQSE 199
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A7S1CCR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCR9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.740e-15 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 1 Query: 16 ELVRDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGD-FQLASAGATGDSTLRFWSLTE 429 E V++ VTA V P R + T ++ LR W + + + A H S V +A+ P+G LVATGG DR VMVWDV G+ATH FRGH +V + + D +L + D+T+R W+L E Sbjct: 61 EEVQEPVTAFVVHPRRREIVTAHRSGMLRHWSIDVEGGKREVLNEWKGA-------------HSSPVLCMAYDPTGTLVATGGADRIVMVWDVERGYATHHFRGHDAIVTHLHFHPDPKKLMLVSCSEDTTVRLWALRE 186
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A4D9D3B5_9STRA (Utp13 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3B5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.210e-15 Identity = 59/149 (39.60%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 25 RDRVTALAVSPDGRTLATCSKTLFLRTWDLS---GIVAAAQTRTRTRVAVPLL-RSIR----MAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGDFQLASA------GATGDSTLRFWSLTE 429 ++ + A A P G+ +AT S+ L LR WD G V A+ R PL RS R A H++ V ++ + +G L+ATGG+DR+V VWDV GF TH FRGH+G+V V F SA A+ D T+R WSL E Sbjct: 94 KEEIIAFAAHPSGQEIATASRNLMLRYWDWRSPPGPVEASTAPLSGRS--PLSGRSFRPRCMRAYKAHETPVLAMEYDSTGTLLATGGSDRSVHVWDVPGGFCTHNFRGHTGIVTLV----AFHPESAQRELLFSASDDCTVRVWSLRE 236
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A0P1AAK2_PLAHL (Transducin-like 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAK2_PLAHL) HSP 1 Score: 80.9 bits (198), Expect = 5.810e-15 Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 1 QGAEDELVRDRVTALAVSPDGRT-LATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGD-FQLASAGATGDSTLRFWSLTEQAQ 438 Q +D+ +++ AV P + L T + L LR WDL+ +R+I+ H + V ++ F PSG L+ATGG+DR V V+DV GF TH FRGH+G+V V + + QL+ ++ D T+R W L Q Q Sbjct: 84 QDVKDDDMKESFVVFAVRPGKKNQLVTAGRNLLLRVWDLNTFEC--------------VRTIK----AHDTPVLAMCFDPSGTLLATGGSDRTVKVFDVDKGFCTHNFRGHAGIVTLVQFHPNAVQLSLVSSSDDGTVRIWDLYTQKQ 213
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: K3WQG2_GLOUD (Utp13 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQG2_GLOUD) HSP 1 Score: 80.5 bits (197), Expect = 7.510e-15 Identity = 52/145 (35.86%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 1 QGAEDELVRDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGDFQ-LASAGATGDSTLRFWSLTEQ 432 Q EDE ++ AV P L T + L LR WDL LR+I+ H + V ++ F P+G L+ATGG+DRAV V+ + G+ TH FR HSG+V V + D + L + DST+R W L Q Sbjct: 70 QDIEDEEAKESFVVFAVRPGHNQLVTAGRNLLLRLWDLDTFTC--------------LRTIK----AHDTPVLAMDFDPTGTLLATGGSDRAVKVFXIEKGYCTHNFRRHSGIVTLVKFHPDAKRLQLVSCSDDSTVRIWDLYSQ 196
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A484E7L4_BRELC (Utp13 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7L4_BRELC) HSP 1 Score: 80.1 bits (196), Expect = 1.080e-14 Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 1 QGAEDELVRDRVTALAVSPDG-RTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGDF-QLASAGATGDSTLRFWSLTEQAQ 438 QG++D ++ + AV + T S+ L LR WDL L+ +R+ H S V ++ PSG L+ATGG+DR V V+D+ GF TH FRGH+G+V V + D QL+ A+ D T+R W L Q Q Sbjct: 81 QGSKDNDTKESIVVFAVRLGKYNQIVTASRNLLLRVWDLE-----------------TLKCVRVI-KAHDSPVLAMDIDPSGTLLATGGSDRTVRVFDIDKGFCTHNFRGHAGIVTLVQFHPDAAQLSLVSASDDLTVRIWDLYTQKQ 210
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: M3WFN9_FELCA (Transducin beta like 3 n=55 Tax=Laurasiatheria TaxID=314145 RepID=M3WFN9_FELCA) HSP 1 Score: 78.6 bits (192), Expect = 3.670e-14 Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 25 RDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGD-FQLASAGATGDSTLRFWSLTEQ 432 ++ +TA +SPD L T S+ L L W A + + TR L ++I H + VA++AF P+ L+ATGG D AV VWDV + TH FRG SGVVH V + D +L + D+T+R WSL +Q Sbjct: 66 QEDITAFDLSPDDEVLVTASRALLLAQW-------AWREGSITR----LWKAI------HTAPVAAMAFDPTSTLLATGGCDGAVRVWDVVRHYGTHHFRGSSGVVHLVAFHPDPARLLLFSSAVDATIRVWSLQDQ 185
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A7S2DDZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDZ1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 5.860e-14 Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 1 Query: 1 QGAEDELVRDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRV 351 + AE+E+ R+ + A+ P+G L T S+ LR W A V+ ++SIR GH V S+ + +G L+ATG DR VWD+ GFATH FRGH+G+V V Sbjct: 12 EDAEEEIPRESILCFALHPNGLELVTASRNSLLRCW--------AWELNADSVSPKCMKSIR----GHDEPVLSMDYESTGTLLATGSADRTARVWDLRGGFATHNFRGHTGIVTLV 116
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A8C0PP79_CANLF (TNF receptor associated factor 7 n=2 Tax=Canis lupus familiaris TaxID=9615 RepID=A0A8C0PP79_CANLF) HSP 1 Score: 77.8 bits (190), Expect = 6.770e-14 Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 25 RDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGD-FQLASAGATGDSTLRFWSLTEQ 432 ++ +TA +SPD + L T ++ L L W A + + TR L ++I H + VA++AF P+ L+ATGG D AV VWD+ + TH FRG GVVH V + D +L + D+T+R WSL +Q Sbjct: 79 QEDITAFELSPDDQVLVTATRALLLAQW-------AWREGSITR----LWKAI------HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSSAADATIRMWSLQDQ 198
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Match: A0A5J5MR68_MUNRE (Utp13 domain-containing protein (Fragment) n=8 Tax=Pecora TaxID=35500 RepID=A0A5J5MR68_MUNRE) HSP 1 Score: 77.8 bits (190), Expect = 6.790e-14 Identity = 57/145 (39.31%), Postives = 77/145 (53.10%), Query Frame = 1 Query: 1 QGAEDELVRDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRTRVAVPLLRSIRMAASGHKSAVASIAFHPSGELVATGGTDRAVMVWDVTAGFATHRFRGHSGVVHRVWWTGD-FQLASAGATGDSTLRFWSLTEQ 432 Q E E D +TA +SPD + L T S+ L L W A Q + TR L ++I H + VA++AF P+ L+ATGG D AV VWDV + TH FRG GVVH V + D +L + D+++R WSL E+ Sbjct: 45 QSLEQEDQED-ITAFDLSPDDKVLVTASRALLLAQW-------AWQEGSVTR----LWKAI------HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRYYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSVRVWSLQER 171 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103066.649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103066.649.1 >prot_M-pyrifera_M_contig103066.649.1 ID=prot_M-pyrifera_M_contig103066.649.1|Name=mRNA_M-pyrifera_M_contig103066.649.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp QGAEDELVRDRVTALAVSPDGRTLATCSKTLFLRTWDLSGIVAAAQTRTRback to top mRNA from alignment at M-pyrifera_M_contig103066:31..468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103066.649.1 ID=mRNA_M-pyrifera_M_contig103066.649.1|Name=mRNA_M-pyrifera_M_contig103066.649.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig103066:31..468+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103066:31..468+ >mRNA_M-pyrifera_M_contig103066.649.1 ID=mRNA_M-pyrifera_M_contig103066.649.1|Name=mRNA_M-pyrifera_M_contig103066.649.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig103066:31..468+ (Macrocystis pyrifera P11B4 male)back to top |