mRNA_M-pyrifera_M_contig10303.635.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI) HSP 1 Score: 162 bits (409), Expect = 1.940e-48 Identity = 83/148 (56.08%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 1 MELNSAFTREHLFLMCLDDASVPIFAS-LGIRCVPLGDLKLHSHRDLWKTRVRVVSCLLAEGYDVIMSDSDALWLGDPMEYLHLSS---SSVIASRGSFPAELGIEWGATMCMGFIMFRATG--AAMDIFQDTMERVVLKTGDDQIAI 426 MEL ++FTR HL+LMCLDD S+ F S +GI C+PL L + SH +W RVRVVSCL G+DVIMSD+DALWL DPM+ L SS++ASRG P E+G WGATMCMGFI+FRAT AM F M +V ++ DDQIA+ Sbjct: 1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGLNISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.460e-47 Identity = 82/147 (55.78%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 1 MELNSAFTREHLFLMCLDDASVPIF-ASLGIRCVPLGDLKLHSHRDLWKTRVRVVSCLLAEGYDVIMSDSDALWLGDPMEYLHLS---SSSVIASRGSFPAELGIEWGATMCMGFIMFRATGA-AMDIFQDTMERVVLKTGDDQIAI 426 MELNSA TR+HL+LMC+D+ SV F +S+ IRC+PL SH ++W R RVVSCL+ G DVIMSD+DALWL DP + +L SSV+ASRG FP LG+EWGATMCMGF++FRATG + F + M+ +V K DDQI++ Sbjct: 79 MELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISV 225
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE) HSP 1 Score: 146 bits (368), Expect = 4.760e-40 Identity = 78/147 (53.06%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 1 MELNSAFTREHLFLMCLDDASVPIF-ASLGIRCVPLGDLKLHSHRDLWKTRVRVVSCLLAEGY-DVIMSDSDALWLGDPMEYLHLSSSS----VIASRGSFPAELGIEWGATMCMGFIMFRATGAA-MDIFQDTMERVVLKTGDDQI 420 ME NS FTR +++LMC+D AS F A +GIRCVP+ L L +H+D+W+ RV+VVSCLL G+ DVIMSD+DALWL DP + L +IASRGS+P E EWG+T+CMGFI+FRA A M F D M +V++ DDQ+ Sbjct: 21 MERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQM 167
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI) HSP 1 Score: 144 bits (364), Expect = 1.750e-39 Identity = 77/149 (51.68%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 1 MELNSAFTREHLFLMCLDDASVPIF-ASLGIRCVPLGDLKLHSHRDLWKTRVRVVSCLLAEG-YDVIMSDSDALWLGDPMEYLHLSSSS----VIASRGSFPAELGIEWGATMCMGFIMFRATGAA-MDIFQDTMERVVLKTGDDQIAI 426 ME NS FTR +++LMC+DDAS F +GIRCVP+ L L +H +W+ RVRVVSCLL G DVIMSD+DALWL DP + L ++ASRGS+P + EWG+T+CMGFI+FRA A M F D M +V++ DDQI++ Sbjct: 71 MERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISV 219
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.330e-36 Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = 1 Query: 1 MELNSAFTREHLFLMCLDDASVPIFASLGIRCVPLGDLKLHSHR-DLWKTRVRVVSCLLAEGYDVIMSDSDALWLGDPMEYLHLSS---SSVIASRGSFPAELGIEWGATMCMGFIMFRATGAAMDIFQDTMERVVLKTGDDQIAI 426 MEL+S F+RE+L+L+CLD+ SV IF LGIRCV G L R D+W R+ V CLL G DV+MSD+DA+WL DP + L + S+V+ASR P L +WGAT+CMGF FRA G+AM F +E + + G+DQIA+ Sbjct: 180 MELHSTFSRENLYLVCLDEESVAIFDGLGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGSAMQAFMTVVEEIANELGNDQIAV 325
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE) HSP 1 Score: 134 bits (336), Expect = 2.760e-35 Identity = 72/146 (49.32%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 1 MELNSAFTREHLFLMCLDDASVPIFASLGIRCVPLGDLKLHSHR-DLWKTRVRVVSCLLAEGYDVIMSDSDALWLGDPMEYLHLS---SSSVIASRGSFPAELGIEWGATMCMGFIMFRATGAAMDIFQDTMERVVLKTGDDQIAI 426 MEL+S F+RE+L+L+CLD+ SV IF LGIRCV G L R D+W RV CLL G DV+MSD+DA+WL DP S+V+ASR P L +WGAT+CMGF FRA G+AM F + +V + GDDQ A+ Sbjct: 105 MELHSTFSRENLYLVCLDEESVAIFDGLGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGSAMQAFMTVVGEIVNELGDDQKAV 250
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI) HSP 1 Score: 126 bits (316), Expect = 6.250e-32 Identity = 65/146 (44.52%), Postives = 92/146 (63.01%), Query Frame = 1 Query: 1 MELNSAFTREHLFLMCLDDASVPIFASLGIRCVPLGDLKLH-SHRDLWKTRVRVVSCLLAEGYDVIMSDSDALWLGDPMEYLHLSS---SSVIASRGSFPAELGIEWGATMCMGFIMFRATGAAMDIFQDTMERVVLKTGDDQIAI 426 MEL+S F+RE+++L+CLD+ SV F +LGIRCV G + S +W R+ V CLL G DV+MSD+DA+WL DPM+ SS++ASRG+ P L WGAT+CMGF++FRA A+ F + + + +DQ A+ Sbjct: 163 MELHSTFSRENMYLICLDEESVESFGALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGSNAIYQFMEVVGEFTEELENDQQAV 308
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 3.250e-21 Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 181 GYDVIMSDSDALWLGDPMEYLHLSS---SSVIASRGSFPAELGIEWGATMCMGFIMFRATGA--AMDIFQDTMERVVLKTGDDQIAI 426 G+DV+MSD+DALWL DPM+ L SS++ASRGSFP E+G WGAT+CMGFI+FR T + AM F M +VL+ DDQIA+ Sbjct: 67 GHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAV 153
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: A0A7S0SXH7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXH7_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.250e-15 Identity = 41/113 (36.28%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 40 LMCLDDASVPIFASLGIRCVPLGDL-------KLHSHRDLWKTRVRVVSCLLA-EGYDVIMSDSDALWLGDPME--YLHLSSSSVIASRGSFPAELGIEWGATMCMGFIMFRA 348 ++C+DD+S +G+ CV + K ++W R+ ++S L+ E DVI++D D+LW+ P+ +H +SSS+++SR +P EL WGAT+CMGFI F+A Sbjct: 1 IICIDDSSFNQLLDIGLYCVLSNNFVSDKSFNKNDYKHNIWLRRIEILSHLINNENQDVILTDLDSLWINSPLNDISIHSASSSIVSSRAWWPHELWSVWGATLCMGFIYFKA 113
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT) HSP 1 Score: 78.2 bits (191), Expect = 2.310e-14 Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 1 MELNSAFTR-----------EHL-----FLMCLDDASVPIFASLGIRC---VPLGDLKLHSHRDLWKTRVRVVSCLLAEGYDVIMSDSDALWLGDPMEYLHLSSSSVIASRGSFPAELGIEWGATMCMGFIMFRATG----AAMDIFQDTM 384 M LNSA+TR HL ++C D A+ A LG RC V G S ++ R+ V+ L+ G DV+++D DA+WLGDP+ + + + +I SRG P ++WGA++CMGFI FR + AAM + + M Sbjct: 53 MVLNSAYTRVFENFIRAPGAHHLAAWETHIICTDRATAVSLAKLGWRCQDTVKTG----RSAAQVYTRRIPYVAHLVHLGRDVLITDVDAIWLGDPLPDIMATQAGIIGSRGRSPH---LDWGASLCMGFIFFRGSDPLVRAAMPVLTEPM 196 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10303.635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10303.635.1 >prot_M-pyrifera_M_contig10303.635.1 ID=prot_M-pyrifera_M_contig10303.635.1|Name=mRNA_M-pyrifera_M_contig10303.635.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp MELNSAFTREHLFLMCLDDASVPIFASLGIRCVPLGDLKLHSHRDLWKTRback to top mRNA from alignment at M-pyrifera_M_contig10303:5626..6051+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10303.635.1 ID=mRNA_M-pyrifera_M_contig10303.635.1|Name=mRNA_M-pyrifera_M_contig10303.635.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig10303:5626..6051+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10303:5626..6051+ >mRNA_M-pyrifera_M_contig10303.635.1 ID=mRNA_M-pyrifera_M_contig10303.635.1|Name=mRNA_M-pyrifera_M_contig10303.635.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig10303:5626..6051+ (Macrocystis pyrifera P11B4 male)back to top |