mRNA_M-pyrifera_M_contig1030.628.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: D7G0Q8_ECTSI (Hypothetical UPF0043 protein slr0305 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q8_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.430e-18 Identity = 45/49 (91.84%), Postives = 48/49 (97.96%), Query Frame = 1 Query: 13 IVAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 +VAKTFC+DFLSIVLALGSGVVFGGVLQGAL+ST CATIASGLGFQLAR Sbjct: 180 VVAKTFCVDFLSIVLALGSGVVFGGVLQGALVSTACATIASGLGFQLAR 228
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: A0A836CC84_9STRA (Hypothetical UPF0043 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC84_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.750e-10 Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 1 Query: 19 AKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 +KT C DFLS++LAL SG++FGGV++GA S VCAT+AS +GFQLAR Sbjct: 118 SKTLCADFLSVILALISGILFGGVVEGAAASVVCATLASVVGFQLAR 164
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: W7TU38_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU38_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.690e-9 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 1 Query: 13 IVAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 +VAK CLD L++VL L SG++FGGV +GAL STVCAT AS +GF LAR Sbjct: 179 VVAKNLCLDGLALVLGLSSGILFGGVWEGALSSTVCATGASFIGFMLAR 227
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: A0A4D9CWB6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWB6_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 4.620e-9 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 1 Query: 13 IVAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 +VAK CLD L++VL L SG++FGGV +GAL STVCAT AS +GF LAR Sbjct: 83 VVAKNLCLDGLALVLGLSSGILFGGVWEGALSSTVCATGASFIGFMLAR 131
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: A0A7S3NJR5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJR5_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 8.670e-9 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 1 Query: 19 AKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 AKT C+D L+ VLAL SGV+FGG++QGALIS+ CA + S L F LAR Sbjct: 183 AKTLCIDALAFVLALASGVIFGGLIQGALISSTCAALGSSLPFLLAR 229
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: F0Y2Z0_AURAN (Fucosyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Z0_AURAN) HSP 1 Score: 55.8 bits (133), Expect = 1.070e-7 Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 1 CFRRIVAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 C IVAK C+D L+ LA+ SGV+FGGV+ GAL++T CATI S + F LAR Sbjct: 2242 CGAFIVAKVGCVDPLTFALAISSGVLFGGVVNGALVATACATIGSSVAFGLAR 2294
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: A0A7S2HIK0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HIK0_9EUKA) HSP 1 Score: 53.1 bits (126), Expect = 2.730e-7 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 13 IVAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 +VAK F +DFLSI LA SG++FGGV QGAL+S AT+ S + QL+R Sbjct: 1 VVAKVFLVDFLSIALAFSSGILFGGVFQGALVSAAGATVGSLVALQLSR 49
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: A0A8J2WN29_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WN29_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 6.930e-7 Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 16 VAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 VAK CLD L+ +LA+ SGV+FGGV++GAL +T CAT+ S + F +AR Sbjct: 152 VAKVLCLDALTFLLAVSSGVLFGGVVKGALAATACATLGSTVAFGIAR 199
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: A0A7S2R0Q0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0Q0_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 6.940e-7 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1 Query: 22 KTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 K FCLDF ++LAL SG++FGGVLQGA S + ATI S + F LA+ Sbjct: 166 KVFCLDFGGVILALSSGILFGGVLQGAAFSALSATIGSSVAFGLAK 211
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Match: A0A7S0F829_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F829_9EUKA) HSP 1 Score: 52.8 bits (125), Expect = 1.300e-6 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 13 IVAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQLAR 159 +VAK F LD +SI LA SG++FGGV +GA+IS V AT+ S FQL+R Sbjct: 168 VVAKVFLLDVISIALAFASGIIFGGVFEGAIISAVGATLGSLAAFQLSR 216 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1030.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1030.628.1 >prot_M-pyrifera_M_contig1030.628.1 ID=prot_M-pyrifera_M_contig1030.628.1|Name=mRNA_M-pyrifera_M_contig1030.628.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp CFRRIVAKTFCLDFLSIVLALGSGVVFGGVLQGALISTVCATIASGLGFQback to top mRNA from alignment at M-pyrifera_M_contig1030:1073..1231+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1030.628.1 ID=mRNA_M-pyrifera_M_contig1030.628.1|Name=mRNA_M-pyrifera_M_contig1030.628.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=159bp|location=Sequence derived from alignment at M-pyrifera_M_contig1030:1073..1231+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1030:1073..1231+ >mRNA_M-pyrifera_M_contig1030.628.1 ID=mRNA_M-pyrifera_M_contig1030.628.1|Name=mRNA_M-pyrifera_M_contig1030.628.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig1030:1073..1231+ (Macrocystis pyrifera P11B4 male)back to top |