mRNA_M-pyrifera_M_contig102888.612.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A0A6H5JP99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP99_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 7.900e-17 Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 1 MVRVVVARTREGLEAVELSTGRPLGAVALPAAA-SGAGVYADLNGDGVVDHVQ-VGARDG 174 +VRVV+ARTR+GLEAVELSTG+PL AVALPAA + AGVY DLNGDGVVDHVQ VG R G Sbjct: 444 LVRVVLARTRDGLEAVELSTGKPLSAVALPAATGTDAGVYVDLNGDGVVDHVQAVGTRGG 503
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: D8LK18_ECTSI (Aldehyde dehydrogenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK18_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 4.040e-14 Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 1 Query: 22 RTREGLEAVELSTGRPLGAVALPAAA-SGAGVYADLNGDGVVDHVQ-VGARDG 174 RTR+GLEAVELSTG+PL AVALPAAA + AGVY DLNGDGVVDHVQ VG R G Sbjct: 341 RTRDGLEAVELSTGKPLSAVALPAAAGTDAGVYVDLNGDGVVDHVQAVGTRGG 393
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: UPI000C1CE79E (uncharacterized protein LOC111373976 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE79E) HSP 1 Score: 52.4 bits (124), Expect = 2.210e-6 Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQVGARDG 174 VVVA REG+EAV L++GR L + L G++AD+NGDGV+DHVQV R+G Sbjct: 395 VVVAHQREGIEAVHLASGRTLCKLHLQEG----GLHADINGDGVLDHVQVVGRNG 445
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A0A804I2N0_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804I2N0_MUSAM) HSP 1 Score: 51.2 bits (121), Expect = 5.660e-6 Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQVGARDG 174 VVVA +EG+EAV L++GR + + LP G++AD+NGDGV+DHVQV +G Sbjct: 394 VVVAHQKEGIEAVHLASGRTICQLHLPEG----GLHADINGDGVLDHVQVVGANG 444
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A0A5P1F657_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F657_ASPOF) HSP 1 Score: 50.8 bits (120), Expect = 7.740e-6 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQV 159 VVVA +EG+EAV L++GR + + LP G++AD+NGDGV+DHVQV Sbjct: 365 VVVAHQKEGIEAVHLASGRTICKLHLPEG----GLHADINGDGVLDHVQV 410
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A0A7R9XN42_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9XN42_9CHLO) HSP 1 Score: 50.8 bits (120), Expect = 7.740e-6 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQ 156 V+VA +EG+E V L TGR L + LP G G++AD+NGDGV+DHVQ Sbjct: 355 VIVAHLQEGIEVVHLFTGRTLCKLLLP----GPGLHADINGDGVLDHVQ 399
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A0A7I8K498_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K498_SPIIN) HSP 1 Score: 50.8 bits (120), Expect = 7.750e-6 Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQ-VGAR 168 VVVA +EG+EA+ L++GR L + LP G++AD+NGDGV+DHVQ VG R Sbjct: 398 VVVAHEKEGIEAIHLASGRTLCKLHLPEG----GLHADINGDGVLDHVQAVGGR 447
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A0A2I0X922_9ASPA (60S ribosomal protein L29-1 n=5 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0X922_9ASPA) HSP 1 Score: 50.8 bits (120), Expect = 7.760e-6 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQV 159 VVVA +EG+EAV L++GR + + LP G++AD+NGDGV+DHVQV Sbjct: 394 VVVAHQKEGIEAVHLASGRTICKLHLPEG----GLHADINGDGVLDHVQV 439
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A0A843WSK9_COLES (Uncharacterized protein (Fragment) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843WSK9_COLES) HSP 1 Score: 50.4 bits (119), Expect = 1.050e-5 Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQ 156 VVVA +EG+EAV L+TGR + + LP G++AD+NGDGV+DHVQ Sbjct: 172 VVVAHEKEGIEAVHLATGRTICKLHLPEG----GLHADVNGDGVLDHVQ 216
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Match: A9RAT3_PHYPA (Uncharacterized protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RAT3_PHYPA) HSP 1 Score: 50.1 bits (118), Expect = 1.440e-5 Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 10 VVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHVQ 156 VVVA +EG+EAV L+TGR + + LP G++AD+NGDGV+DHVQ Sbjct: 240 VVVAHLKEGIEAVHLATGRTVCKLFLPEG----GLHADVNGDGVLDHVQ 284 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102888.612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102888.612.1 >prot_M-pyrifera_M_contig102888.612.1 ID=prot_M-pyrifera_M_contig102888.612.1|Name=mRNA_M-pyrifera_M_contig102888.612.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp MVRVVVARTREGLEAVELSTGRPLGAVALPAAASGAGVYADLNGDGVVDHback to top mRNA from alignment at M-pyrifera_M_contig102888:425..598- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102888.612.1 ID=mRNA_M-pyrifera_M_contig102888.612.1|Name=mRNA_M-pyrifera_M_contig102888.612.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=174bp|location=Sequence derived from alignment at M-pyrifera_M_contig102888:425..598- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102888:425..598- >mRNA_M-pyrifera_M_contig102888.612.1 ID=mRNA_M-pyrifera_M_contig102888.612.1|Name=mRNA_M-pyrifera_M_contig102888.612.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig102888:425..598- (Macrocystis pyrifera P11B4 male)back to top |