mRNA_M-pyrifera_M_contig102829.605.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: A0A7S3JQ48_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQ48_9STRA) HSP 1 Score: 172 bits (436), Expect = 9.720e-48 Identity = 79/146 (54.11%), Postives = 110/146 (75.34%), Query Frame = 1 Query: 106 NIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG-GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRREA 540 N VDTL G+DL+ CAET E PV+R + +RKLVCNIQGG G+ ++DHLHEG++IGL G++EKRS+ILGRNA+W ++ + +LP +L IQFMRFFWK + ++ + G KCKI+RPVSFP + D++D+C + LQ L+ R+A Sbjct: 206 NTVDTLFGIDLQENLSCAETQDEPPVIRQDKARKLVCNIQGGHGASTKIDHLHEGIKIGLSGTLEKRSDILGRNAIWNKTQTIVKLPPYLCIQFMRFFWKPTPNNDDHQGVKCKIMRPVSFP-ETFDVFDYCQQDLQKELKFNRDA 350
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: A0A5A8CSV3_CAFRO (Ubiquitinyl hydrolase 1 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSV3_CAFRO) HSP 1 Score: 172 bits (437), Expect = 3.110e-47 Identity = 88/195 (45.13%), Postives = 125/195 (64.10%), Query Frame = 1 Query: 1 FTSILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAET-DAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG---GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRREAKIKRDDLARSS 573 F + L LA L + A P + P + G N+VD+L+G++L C E DAE PV R ++ KLVCNIQGGGGS +V+ L EGLR+ +EGS EKRSE+LGR+ALW R S+++RLP +L +QFMRF+W+A + + G G+K KI R V+FP + LD++DFC LQ AL R+ + ++ R++ Sbjct: 206 FQNALLGDLATALVKAPAAGPAPLAPPLRGSGRSANVVDSLLGLELDTTMTCDEAPDAEPPVRRTDTQLKLVCNIQGGGGSSTKVNFLSEGLRLAMEGSTEKRSEVLGRDALWTRKSRISRLPPYLCVQFMRFYWQAHTDAAPGAPAGSKFKIKRSVAFPANGLDMFDFCAPDLQKALTAARDKHAREEESRRAA 400
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: W7TNR7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNR7_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.290e-46 Identity = 82/166 (49.40%), Postives = 122/166 (73.49%), Query Frame = 1 Query: 106 NIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPE-GGNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRREAKIKRDDLARSSSKPGEEGSG 600 N VD L G+++ CAE++AE PVV+ + RKLVCNIQGG GSDV++++LHEG+++ LEG++EK+SE+LGR+A+W +++++ARLP++L +QFMRFFWKA+ S + G KCK LR V+FP + LD++DFC++ LQ L R ++ DD+ SK +G G Sbjct: 227 NFVDALFGMEVEDTLSCAESEAEKPVVKRDHVRKLVCNIQGGAGSDVKINYLHEGVKLALEGTIEKQSEVLGRDAVWNKTTRIARLPRYLCVQFMRFFWKATPDSQDHAGVKCKSLRTVTFP-ETLDMFDFCNKTLQDRLMITRGREV--DDILGKDSKKKGDGLG 389
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: A0A7S2WF75_9STRA (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF75_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.190e-45 Identity = 87/178 (48.88%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 19 SALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG-----GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRRE 537 SALA L PT +P L G N+VD L G+++ C E+ E R E SRKLVCNIQGGGGS VDHLHEG+ +GL+G++EK SE+LGRNALW R+ ++ RLP+ + +QFMRF+WK + EG G KCKI+RPVSFP + LD+Y+FC++ +Q L+ R+ Sbjct: 235 SALASTLKDPTG-LPDL--------GGAQNLVDALFGLEMEESLTCDESPDEPTSTRKEISRKLVCNIQGGGGSAAHVDHLHEGVMLGLKGTIEKNSELLGRNALWTRTQRINRLPRIVCVQFMRFYWKEARVLEEGREVVRGQKCKIMRPVSFP-EVLDVYNFCNDRVQGLLKANRD 402
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: A0A8K1FF25_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF25_PYTOL) HSP 1 Score: 160 bits (406), Expect = 2.980e-43 Identity = 84/180 (46.67%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 1 FTSILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG-GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRRE 537 F S LFS L+R LT P + S G N+VD L G+D+ K CAETD E PVV+ E + KLVCNI + +HL EG++IGLEG +EK SE+LGRNA W+++ ++ RLPK+L +QFMRF+WK + S + G KCK+LRP++FP LD+Y+FC + L+A ++ R+ Sbjct: 202 FLSTLFSTLSRTLTTPVG---------LPSLGPASNMVDALFGLDMIEKLECAETDMELPVVKSEKANKLVCNIT------IETNHLGEGIKIGLEGGIEKHSEVLGRNAQWKKTLRINRLPKYLCVQFMRFYWKLTPESRDHTGVKCKMLRPIAFP-QILDVYEFCSDELKATMKIARD 365
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: A0A3M6VV79_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV79_9STRA) HSP 1 Score: 160 bits (404), Expect = 6.010e-43 Identity = 81/180 (45.00%), Postives = 121/180 (67.22%), Query Frame = 1 Query: 1 FTSILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG-GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRRE 537 F S LFS L + LT+PT+ + L G N+VD L G+++ K C E++ E VV+ E + KLVCNI + +HL EG++IGLEG++EK S++LGRNA+W+++ ++ RLPK+L +QFMRF+WKA+ S + G KCK+LRP+SFP+ LD+YDFC + L+A ++ R+ Sbjct: 202 FLSTLFSTLQQTLTQPTSGLKSL--------GPTSNVVDALFGLEMNEKIECTESELEEVVVKKEKALKLVCNIT------IETNHLSEGIKIGLEGTIEKYSDVLGRNAVWKKTLRINRLPKYLCVQFMRFYWKATPESRDHTGVKCKMLRPISFPM-TLDVYDFCSDDLKATMKISRD 366
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: A0A6V1NRX8_HETAK (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRX8_HETAK) HSP 1 Score: 157 bits (398), Expect = 7.030e-43 Identity = 80/178 (44.94%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 7 SILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPE-GGNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRRE 537 S + + LA+ L P +P L G N+VD L G+++ C E E VVR + RKLVCNIQGG GS V V HLHEG+++G EG++EK S+ILGRNA+W++ ++ RLP+++ +QFMRF+WKA+ S + G KCKI++PVSFP +D ++FC + L+A L R+ Sbjct: 205 SAVQTTLAQVLKEPAGGLPGL--------GGAENLVDALFGLEVEETLTCEECPEEPAVVRSDLVRKLVCNIQGGAGSAVNVAHLHEGVKLGFEGTIEKHSDILGRNAVWKKVQRVRRLPRYVCVQFMRFYWKATPDSMDHAGVKCKIMKPVSFP-SVMDTFEFCSDRLKATLGVHRD 373
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: H3GBF8_PHYRM (Ubiquitin carboxyl-terminal hydrolase n=23 Tax=Phytophthora TaxID=4783 RepID=H3GBF8_PHYRM) HSP 1 Score: 158 bits (399), Expect = 3.570e-42 Identity = 79/180 (43.89%), Postives = 121/180 (67.22%), Query Frame = 1 Query: 1 FTSILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG-GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRRE 537 F S LF+ L + LT+P + + +GP N+VD L G++L K C E++ E+PV++ E + KLVCNI + +HL EG++IGLEG++EK S++L RNA+W+++ ++ RLPK+L +QFMRF+WKA+ S + G KCK+LRP+SFP LD++DFC + LQA ++ R+ Sbjct: 203 FLSTLFATLQQTLTQPAGAL-KTLGPTS-------NVVDALFGLELNEKIECTESEMETPVLKKEKALKLVCNIT------IETNHLSEGIKIGLEGTIEKHSDVLDRNAVWKKTLRINRLPKYLCVQFMRFYWKATPESRDHTGVKCKMLRPISFPT-TLDVFDFCSDELQATMKISRD 367
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: A0A485LT02_9STRA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LT02_9STRA) HSP 1 Score: 157 bits (397), Expect = 7.060e-42 Identity = 82/180 (45.56%), Postives = 119/180 (66.11%), Query Frame = 1 Query: 1 FTSILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG-GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRRE 537 F S LF L+R+L +PT+T+ L G +IVD L G+++ K CAETD+E V + E + KLVCNI +H+ EG+ IGLEG++EK S++LGRNA W++S K+ RLPK+L +QFMRF+WK + S + G KCK+LRP+SFP+ LD+++FC + L+A L+ R+ Sbjct: 199 FLSTLFGTLSRQLKQPTSTIKSLDGTE--------SIVDALFGLEMEEKLECAETDSEPVVAKKEKALKLVCNITKD------TNHISEGIAIGLEGTIEKNSDVLGRNATWKKSQKINRLPKYLCVQFMRFYWKLTPESRDHTGVKCKMLRPISFPMI-LDVFNFCSDELKAVLKVGRD 363
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Match: K3WGB7_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGB7_GLOUD) HSP 1 Score: 156 bits (394), Expect = 1.670e-41 Identity = 79/180 (43.89%), Postives = 116/180 (64.44%), Query Frame = 1 Query: 1 FTSILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDVCAETDAESPVVRFESSRKLVCNIQGGGGSDVRVDHLHEGLRIGLEGSVEKRSEILGRNALWQRSSKLARLPKFLTIQFMRFFWKASSSSPEG-GNKCKILRPVSFPIDNLDLYDFCDEPLQAALRTRRE 537 F S LFS L R LT P A P L PN++D L G+++ K C E+D E P+V+ E + KLVCNI + +HL EG++IGLEG +EK S++LGRNA W+++ ++ RLPK+L +QFMRF+WK + S + G KCK+LRP+ FP LD+++FC + L+A+++ R+ Sbjct: 202 FLSTLFSTLQRSLTTPVAGFPALT--------PAPNMIDALFGLEMNEKLECVESDLEPPIVKTERALKLVCNIT------IETNHLAEGIKIGLEGVIEKNSDVLGRNAQWKKTLRINRLPKYLCVQFMRFYWKLTPESRDHTGVKCKMLRPIGFP-QVLDVFEFCSDELKASMKIARD 366 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102829.605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102829.605.1 >prot_M-pyrifera_M_contig102829.605.1 ID=prot_M-pyrifera_M_contig102829.605.1|Name=mRNA_M-pyrifera_M_contig102829.605.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp FTSILFSALARRLTRPTATVPRLIGPRMASDGAGPNIVDTLMGVDLRVKDback to top mRNA from alignment at M-pyrifera_M_contig102829:1..648+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102829.605.1 ID=mRNA_M-pyrifera_M_contig102829.605.1|Name=mRNA_M-pyrifera_M_contig102829.605.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig102829:1..648+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102829:1..648+ >mRNA_M-pyrifera_M_contig102829.605.1 ID=mRNA_M-pyrifera_M_contig102829.605.1|Name=mRNA_M-pyrifera_M_contig102829.605.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig102829:1..648+ (Macrocystis pyrifera P11B4 male)back to top |