mRNA_M-pyrifera_M_contig102826.604.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: UPI0019903390 (Diaminopimelate epimerase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019903390) HSP 1 Score: 172 bits (436), Expect = 8.120e-50 Identity = 101/177 (57.06%), Postives = 118/177 (66.67%), Query Frame = 1 Query: 10 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 540 FAKY GLGNDFLVVD R+ S + D VIA LCDR++GVGGDGVL++ + A A MRVLN+DGSEAEMCGNGLRCVAK L + G + + +DT AG L C +E +G +VTV+MG PRL EIPM G T E IEQPL + RA T VSMGNPHAIAFV Sbjct: 3 FAKYHGLGNDFLVVDLRAV-SAAEAAAVQDPAHVIA--LCDRQFGVGGDGVLAVLPSAT--ADARMRVLNSDGSEAEMCGNGLRCVAKELYDRGGLRQPVITIDTGAGPLRCTIEADDGVARSVTVDMGLPRLARGEIPMTGPTG-ERCIEQPLDVVGAARAITCVSMGNPHAIAFV 173
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7Y6PZ68_9DELT (Diaminopimelate epimerase n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7Y6PZ68_9DELT) HSP 1 Score: 170 bits (431), Expect = 3.320e-49 Identity = 100/185 (54.05%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 10 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALK 564 FAKYQGLGNDFLVVD R + V + LCDR++GVGGDGVL++ P GA A MRVLNADGSEAEMCGNG+RCVAK L + G + S+ +DT AG L C ++ + G +VTV MG PRL EIPM G S E IEQPL +A T VSMGNPHA+AFVT +L+ Sbjct: 3 FAKYQGLGNDFLVVDLRELRGDDAAAAQDPEVV---KALCDRQFGVGGDGVLAVL-PGDPGADARMRVLNADGSEAEMCGNGIRCVAKELFDRGGVKKNSIAIDTGAGRLVCAIDDKGGVAQSVTVEMGAPRLLRGEIPMTGP-SHERCIEQPLQVAGVELVVTCVSMGNPHAVAFVTGDAGSLR 182
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7W0VNZ1_9DELT (Diaminopimelate epimerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0VNZ1_9DELT) HSP 1 Score: 160 bits (405), Expect = 2.380e-45 Identity = 95/178 (53.37%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 10 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAG-TRATTAVSMGNPHAIAFV 540 FAKY GLGNDFLVVD R T + K+ D VIA LCDR++GVGGDGVL++ ++G A MRVLN+DGSEAEMCGNGLRCV ++L + G + + +DT AG L CQL +TV+MG PRL AEIPM G E I+QP+ + TR T VSMGNPHA+ FV Sbjct: 3 FAKYHGLGNDFLVVDLR-TANAADAAKVQDPATVIA--LCDRQFGVGGDGVLAVLPSIAKGDDARMRVLNSDGSEAEMCGNGLRCVVQWLHDHGGVAKDEMAIDTGAGRLVCQLLGER-----ITVSMGAPRLTRAEIPMVGPLG-ERCIDQPIEITGQPTRTITCVSMGNPHAVTFV 171
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7W0T0Z3_9DELT (Diaminopimelate epimerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0T0Z3_9DELT) HSP 1 Score: 155 bits (391), Expect = 3.550e-43 Identity = 99/186 (53.23%), Postives = 118/186 (63.44%), Query Frame = 1 Query: 10 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGA----VAAVTVNMGRPRLRPAEIPMAG---ETSLESFIEQPLALAAGTRAT--TAVSMGNPHAIAFV 540 FAKY GLGNDFLVVD R+ S + D V+A LCDR++GVGGDGVL++ S+ A A MRVLN+DGSEAEMCGNGLRCVAK L + G + ++++T AG L C +E +EG +VTV MG PRL EIPM G E +E E P G AT TAVSMGNPHAI FV Sbjct: 3 FAKYHGLGNDFLVVDLRAA-SVADANAVQDPASVMA--LCDRQFGVGGDGVLAVLP--SKTADARMRVLNSDGSEAEMCGNGLRCVAKELHDRGGLRQPEIVIETGAGNLACAIEAKEGVEDGFATSVTVRMGAPRLTRGEIPMTGPADERCIEQAFEVP-----GQPATAITAVSMGNPHAITFV 178
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A3M2E2N2_9DELT (Diaminopimelate epimerase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M2E2N2_9DELT) HSP 1 Score: 152 bits (383), Expect = 5.310e-42 Identity = 95/196 (48.47%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 10 FAKYQGLGNDFLVVDNRST-------PSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVL-VDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALKALA 573 F KY GLGNDF+VVD R+ P P R LCDRR+GVG DGVL + P ++GA A MRVLNADGSEAEMCGNG+RCVAK L E S L +DT AG L C ++ G V AV V+MGRPRL+ +IPM G S E + P HA+AFV E+GPAL+ALA Sbjct: 3 FFKYHGLGNDFVVVDLRAAQRGDGPWPEDPPA----------VRALCDRRFGVGADGVLPILPPQADGAHARMRVLNADGSEAEMCGNGIRCVAKHLYERDPALRTSPLRIDTGAGTLACAVDADGGTVTAVAVDMGRPRLQRGDIPMTGPAS-ERCVAAPXXXXXXXXXXXXXXXXXXHAVAFVPETGPALRALA 187
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: UPI001987D80A (Diaminopimelate epimerase n=1 Tax=Leptolyngbyaceae cyanobacterium LF-bin-369 TaxID=2804781 RepID=UPI001987D80A) HSP 1 Score: 148 bits (373), Expect = 1.200e-40 Identity = 87/184 (47.28%), Postives = 110/184 (59.78%), Query Frame = 1 Query: 1 TIAFAKYQGLGNDFLVVDNRSTPS---TPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEA-GDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 540 T++F KYQGLGNDF++VDNR PS TP L +CDR +G+G DGV+ P G TMR+ N+DGSE EMCGNG+RC+A+FLA+ G + S V TLAG + ++E +TV+MG+PRL PAEIP + I Q L +A T A T VSMGNPH I FV Sbjct: 8 TLSFVKYQGLGNDFILVDNRHAPSPIVTPEQATL----------MCDRHFGIGADGVI-FALPGQNGTDYTMRIYNSDGSEPEMCGNGIRCMARFLADLEGKNAKSSYTVQTLAGLITPKIENN----GQITVDMGKPRLSPAEIPTTLTGGGNTVIAQSLEVAGKTWAVTCVSMGNPHCITFV 176
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A7C3PGA9_9CYAN (Diaminopimelate epimerase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PGA9_9CYAN) HSP 1 Score: 147 bits (371), Expect = 2.040e-40 Identity = 86/180 (47.78%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 4 IAFAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEA-GDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 540 I F KY GLGNDF+++DNR+ S E + IA LCDR +G+G DGV+ P G MR+ N+DGSE EMCGNG+RC+A+F+AE G+++P + +DTLAG + +LE A VTV+MG PRL AEIP + E I PL +A T T VSMGNPH I FV Sbjct: 3 IHFTKYHGLGNDFILIDNRA-----SAEPCLTTDQAIA--LCDRHFGIGADGVI-FAMPGQNGTDYAMRIYNSDGSEPEMCGNGIRCLARFIAELEGNNEPRAYTIDTLAGVITPRLE----ADGLVTVDMGEPRLLAAEIPTVLTAADEKVINAPLEVAGQTWQVTCVSMGNPHCITFV 170
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: K8EEI5_9FIRM (Diaminopimelate epimerase n=1 Tax=Desulforamulus hydrothermalis Lam5 = DSM 18033 TaxID=1121428 RepID=K8EEI5_9FIRM) HSP 1 Score: 146 bits (368), Expect = 6.200e-40 Identity = 84/177 (47.46%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 10 FAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQPESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFV 540 F K GLGNDF+++ N T E L D +AR++CDRR+G+G DG++ L SE A M+++N+DGSEAEMCGN +RCVAK+L E G + + + V+TLAG + Q+ G V+AV V+MG PRL A+IPM G I +PL +A T TAVSMGNPH + FV Sbjct: 3 FTKVHGLGNDFILI-NAGTG-----EGLPDDCSTLAREMCDRRFGIGADGLVLLLD--SEVADVRMKIINSDGSEAEMCGNAIRCVAKYLYEHGIVRKDEIKVETLAGIMVPQIIHNNGEVSAVRVDMGVPRLARADIPMLGPVG--QVINEPLEVAGQTFNVTAVSMGNPHCVIFV 169
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: D0LTS4_HALO1 (Diaminopimelate epimerase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) TaxID=502025 RepID=D0LTS4_HALO1) HSP 1 Score: 146 bits (369), Expect = 1.270e-39 Identity = 96/201 (47.76%), Postives = 121/201 (60.20%), Query Frame = 1 Query: 10 FAKYQGLGNDFLVVDNRS---TPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQP--ESVLVDTLAGALDCQLEWRE-----GAVAA---VTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALKALA 573 F KY GLGNDFLVVD R T ++ V R LC+RR+G+G DG++++ +G A +RVLN+DGSEAEMCGNGLRCV K+L E E++ ++T AG L C+ + G +AA VTV+MGRPRL A+IPM G E I +PLA+A TAVSMGNPHAIAFV G +ALA Sbjct: 3 FGKYHGLGNDFLVVDLRDPEVAAGTGHAGEVPSPAVV--RALCERRFGIGADGIMAVLPALGDGD-ARLRVLNSDGSEAEMCGNGLRCVVKYLGERDPALRGRETLNIETGAGLLRCRAHRSDTALGDGGIAAIEQVTVDMGRPRLERAQIPMHGPAE-ERCISEPLAIAGRPLDITAVSMGNPHAIAFVDVHGAEQRALA 199
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Match: A0A2T2S1Z3_9CYAN (Diaminopimelate epimerase n=1 Tax=Cyanobacteria bacterium QS_8_64_29 TaxID=1919134 RepID=A0A2T2S1Z3_9CYAN) HSP 1 Score: 145 bits (365), Expect = 1.660e-39 Identity = 90/190 (47.37%), Postives = 116/190 (61.05%), Query Frame = 1 Query: 1 TIAFAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGGDGVLSLTKPTSEGAIATMRVLNADGSEAEMCGNGLRCVAKFLAEAGDDQ-PESVLVDTLAGALDCQLEWREGAVAAVTVNMGRPRLRPAEIPMAGETSLESFIEQPLALAAGTRATTAVSMGNPHAIAFVTESGPALKA 567 +IAFAKYQGLGNDF+V+DNR S P +G A LCDR +G+G DGV+ P ++G +MR+ NADGSE EMCGNG+RC+A+FLAE+ + Q P + TLAG + QL + VTV+MG P+L AE+P + E I QPLA+ TAV MGNPH I FV ++ L A Sbjct: 2 SIAFAKYQGLGNDFVVIDNRHR-SEPVLG--ANG----AMQLCDRHFGIGADGVI-FALPGADGTDCSMRIFNADGSEPEMCGNGIRCLARFLAESTESQVPSRYRIGTLAGVMAPQLR----SDGQVTVDMGEPQLLAAEVPTTLCDANERVIAQPLAVDGEHWTVTAVGMGNPHCITFVEDADAILLA 179 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102826.604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102826.604.1 >prot_M-pyrifera_M_contig102826.604.1 ID=prot_M-pyrifera_M_contig102826.604.1|Name=mRNA_M-pyrifera_M_contig102826.604.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp TIAFAKYQGLGNDFLVVDNRSTPSTPSCEKLVDGVFVIARDLCDRRYGVGback to top mRNA from alignment at M-pyrifera_M_contig102826:75..647+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102826.604.1 ID=mRNA_M-pyrifera_M_contig102826.604.1|Name=mRNA_M-pyrifera_M_contig102826.604.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig102826:75..647+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102826:75..647+ >mRNA_M-pyrifera_M_contig102826.604.1 ID=mRNA_M-pyrifera_M_contig102826.604.1|Name=mRNA_M-pyrifera_M_contig102826.604.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig102826:75..647+ (Macrocystis pyrifera P11B4 male)back to top |