mRNA_M-pyrifera_M_contig13562.5999.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 210 bits (534), Expect = 3.220e-63 Identity = 120/211 (56.87%), Postives = 146/211 (69.19%), Query Frame = 2
Query: 158 GRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRVEVAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRGAPIPACMPVSEEA 790
GR RK T+ NF G +GIF FT V QR+SRNRAAGTMETK VEV + V+K+K++DEVFP IK+ WPGG + +Q DN P+HRI DPD+VAAG AD +IRLIN P NSPDTNILD GF N++QSLQD+ T TVDE I E+ R F Q +T +V + A+LQ I+LAKG+N KLPHL K AA G IP +P+S EA
Sbjct: 77 GRGRK-TNRCCNFTGKLGIFQFT--VQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAEA 283
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.530e-58 Identity = 111/203 (54.68%), Postives = 134/203 (66.01%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRVEVAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGR 646
KWFY+ KQGQ Y G+ LP+ KVQH SH+ VMFLA V RPR D+ +R FDG IGI+ FT V QR+ RN AAGTM T VEV +YK K+ + VFP I++ +P SP++ QQ+NAP HR DPD+VAA I L+N PPNSPD NILD GF NSIQSLQD+TT TV+EL+AE+ R Q TLGR
Sbjct: 63 KWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFT--VQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFPS--SPIIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLGR 260
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: UPI000B906F28 (uncharacterized protein LOC110892967 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B906F28) HSP 1 Score: 177 bits (448), Expect = 8.090e-51 Identity = 100/239 (41.84%), Postives = 137/239 (57.32%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRV-EVAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRG 751
KWFY+ K + Y L G++ P+ + I VMFLA V RPR DT N F G IGIF FT+ PA+ RSS+NR AGT+ETK + V + V + ++D+V P I+ WP G + + +QQDNA H +D + + D +IRL PPNSPD N+LD GF ++IQSLQ+Q L ++DEL+ + F S L V T A ++EIM G N + PH+ K R+G
Sbjct: 23 KWFYLSKPSKRYYLLPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTSGNERFSGKIGIFPFTKLEPAK--RSSKNRVAGTLETKPILSVIKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHNNIDDEQFIQEASRDGFDIRLRFQPPNSPDLNVLDLGFFHAIQSLQEQEVLGSIDELVHAVQTSFEKLSSHELNNVFLTLQACMKEIMKVHGSNHYQTPHIGKGKLERQG 259
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756) HSP 1 Score: 176 bits (447), Expect = 4.750e-49 Identity = 102/239 (42.68%), Postives = 136/239 (56.90%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRV-EVAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRG 751
KWFYM K ++Y L G++ P+ K + I VMFLA V RPR DT N F G IGIF FT+ PA+ RSS+NR AGTMETK + V + V + ++D+V P I+ WP G + + +QQDNA H +D V + +IRL PPNSPD N+LD GF +IQSLQ+Q L ++DEL+ + F S L V T ++EIM G N + PH+ K R+G
Sbjct: 173 KWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAK--RSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHISIDDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVHAVQTSFHKMSSRELNNVFLTLQTCMKEIMKVHGSNNYQTPHISKGRLERQG 409
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 176 bits (445), Expect = 1.450e-48 Identity = 101/237 (42.62%), Postives = 132/237 (55.70%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRVE-VAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAAR 745
KWFYM K Y L ++ P + +I VMF+ V RP D +DG +GIF FT +PAQ R S+NR GTMETK + V + V + +++++ P IK+ WP S + +QQDNA H A DPD AA +D I+LI P NSPDTNILD GF +IQSLQ + TVDEL+ + FA TL RV + A L EI+L +G N K+PH+ K R
Sbjct: 174 KWFYMTKASDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQ--RKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDPDFQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKDRLQR 408
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: UPI001C27372B (uncharacterized protein LOC121774291 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27372B) HSP 1 Score: 175 bits (443), Expect = 2.330e-48 Identity = 99/243 (40.74%), Postives = 142/243 (58.44%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRV-EVAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRGAPIP 763
KWFY+ K Q Y L + P ++ ++I +MF+ V RP + FDG IGIF FT +VPA+ R+S+NR AGT+ETK + + + V KQ +++++ P I WP G S + +QQDNA H +DPD AA T + NI+++ PPNSPDTN+ D G+ +IQSLQ QTT T+D+L+ + F TL V + + + EIM KG N K+PH+ K + RR A +P
Sbjct: 168 KWFYITKGSQRYYLAPEENEPHRTCKNKNYISKIMFMCAVTRPLFSDNGEVLFDGKIGIFPFTEQVPAK--RNSKNRYAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQIVQQPPNSPDTNVNDLGWFRAIQSLQLQTTCNTLDDLVKAVDMSFHDLCPVTLDNVFLSLQSCMLEIMKVKGQNCYKIPHMGK-ASLRRSAQLP 407
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR) HSP 1 Score: 171 bits (433), Expect = 4.730e-48 Identity = 101/241 (41.91%), Postives = 140/241 (58.09%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRV-EVAEAVYKQKMLDEVFPTIKSTWPGGP--SPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRG 751
KWFYM K+ + Y L +E P+ + I VMFLA V RPR D N++FDG IGIF F + PA+ R+S+NR AGT+ETK + V + VY++ ++D V P I++ WP SP+ +QQDNA H D + + A T + +IRL PPNSPD N+LD G+ +IQSLQ Q ++DELI+ + + F S +L V T + E+M G N K+PH+ KQ R G
Sbjct: 67 KWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAK--RNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIF-IQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDG 304
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 174 bits (440), Expect = 5.440e-48 Identity = 99/239 (41.42%), Postives = 135/239 (56.49%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRV-EVAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRG 751
KWFYM K + Y L G++ P+ Q I VMFLA V RPR D N F G IGI+ FTR PA+ RSS+NR AGT+ETK + V + V + ++++V P I++ WP + +QQDNA H ND + + A + D +IRL P NSPD N+LD GF +IQSLQ+Q L T+DEL+ + F S L V T ++EI+ +G N ++PH+ K R G
Sbjct: 176 KWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAK--RSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREG 412
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR) HSP 1 Score: 171 bits (433), Expect = 7.270e-48 Identity = 101/241 (41.91%), Postives = 140/241 (58.09%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRV-EVAEAVYKQKMLDEVFPTIKSTWPGGP--SPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRG 751
KWFYM K+ + Y L +E P+ + I VMFLA V RPR D N++FDG IGIF F + PA+ R+S+NR AGT+ETK + V + VY++ ++D V P I++ WP SP+ +QQDNA H D + + A T + +IRL PPNSPD N+LD G+ +IQSLQ Q ++DELI+ + + F S +L V T + E+M G N K+PH+ KQ R G
Sbjct: 84 KWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAK--RNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIF-IQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDG 321
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3) HSP 1 Score: 173 bits (438), Expect = 1.090e-47 Identity = 98/239 (41.00%), Postives = 136/239 (56.90%), Query Frame = 2
Query: 38 KWFYMFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDGTIGIFLFTRRVPAQLQRSSRNRAAGTMETKRV-EVAEAVYKQKMLDEVFPTIKSTWPGGPSPLVNMQQDNAPAHRIANDPDIVAAGTADD*NIRLINHPPNSPDTNILDQGFSNSIQSLQDQTTLPTVDELIAEITRVFAVQDSATLGRVCSTYPAVLQEIMLAKGDNIVKLPHLYKQTAARRG 751
KWFYM K + Y L G + P+ + I +MFLA V RPR D+ N F G IGI+ FT PA+ RSS+NR AGTMETK + V + V + ++++V P I++ WP G + + +QQDNA H +D + + A + D +IRL PPNSPD N+LD GF +IQSLQ+Q L T DEL+ + F S L V T ++EI+ +G N +PH+ K R+G
Sbjct: 177 KWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAK--RSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQG 413 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13562.5999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13562.5999.1 >prot_M-pyrifera_M_contig13562.5999.1 ID=prot_M-pyrifera_M_contig13562.5999.1|Name=mRNA_M-pyrifera_M_contig13562.5999.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp MFKQGQTYRLGAGQELPVHKVQHNSHIQNVMFLAVVGRPRKDTDANRNFDback to top mRNA from alignment at M-pyrifera_M_contig13562:4207..5008- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13562.5999.1 ID=mRNA_M-pyrifera_M_contig13562.5999.1|Name=mRNA_M-pyrifera_M_contig13562.5999.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=802bp|location=Sequence derived from alignment at M-pyrifera_M_contig13562:4207..5008- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13562:4207..5008- >mRNA_M-pyrifera_M_contig13562.5999.1 ID=mRNA_M-pyrifera_M_contig13562.5999.1|Name=mRNA_M-pyrifera_M_contig13562.5999.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig13562:4207..5008- (Macrocystis pyrifera P11B4 male)back to top |