mRNA_M-pyrifera_M_contig13392.5947.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: D8LH20_ECTSI (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH20_ECTSI) HSP 1 Score: 173 bits (438), Expect = 4.090e-51 Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = 1
Query: 1 TGCVMDMRHPDGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKRSTRVSLTFRRVRDPSVACPCNFEESCDRNTPVATATYLK 282
+GCVMDMRHPDGVRVKN+YLPRGSLLVMEG ARYEWSHGIASRKTDMV GVLT+R+TR+S TFRRVRDP+VAC C+F +SCDR TPVATAT+LK
Sbjct: 255 SGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRATRISFTFRRVRDPAVACGCDFAKSCDRETPVATATFLK 348
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: L8H3U3_ACACA (Alkylated DNA repair protein alkB homolog 8 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3U3_ACACA) HSP 1 Score: 84.3 bits (207), Expect = 7.620e-17 Identity = 45/83 (54.22%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 1 TGCVMDMRHPDGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKRS-TRVSLTFRRVRDPSVACPCNFEESCD 246
+ CVM + PD + K+V+LPR SLLVM GAARY+W H I R+ D V G L KR RVS TFRRVR C C F E CD
Sbjct: 292 SSCVMTLSLPDSSQHKSVFLPRRSLLVMTGAARYQWRHAIPFRRYDCVHGQLIKREGKRVSFTFRRVRGHP--CDCRFAEECD 372
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: A0A8J2S925_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S925_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.940e-16 Identity = 46/101 (45.54%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 4 GCVMDM----RHPDGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKRSTRVSLTFRRVRDPSVACPCNFEESCDRN--TPVATATYLKGS 288
GC + + RH G + ++LP S LV+ GAARY ++HGI SRK D+V G R RVSLTFRR+ P C C+F ESCD + P T L+GS
Sbjct: 145 GCAIRLQRNRRHEAGAPIHTLWLPPRSALVLSGAARYVYTHGIVSRKGDLVDGEWRLRGRRVSLTFRRLPPPG-PCACSFPESCDASGTAPKLLPTRLRGS 244
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: K8YMX3_NANGC (2og-fe oxygenase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YMX3_NANGC) HSP 1 Score: 80.9 bits (198), Expect = 6.400e-16 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 49 NVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKRSTRVSLTFRRVRDPSVA-CPCNFEESCDRNTP 258
++ LPR SLLV++G ARY W+HG+ASRKTD V G L R RVSL+FRR+R+ + C C F SCD+ P
Sbjct: 261 SLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIP 331
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: W7TM49_9STRA (Alkylated dna repair protein alkb-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM49_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.090e-15 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 49 NVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKRSTRVSLTFRRVRDPSVA-CPCNFEESCDRNTP 258
++ LPR SLLV++G ARY W+HG+ASRKTD V G L R RVSL+FRR+R+ + C C F SCD+ P
Sbjct: 275 SLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIP 345
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: UPI001884B311 (alkylated DNA repair protein alkB homolog 8-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884B311) HSP 1 Score: 79.3 bits (194), Expect = 4.380e-15 Identity = 45/88 (51.14%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 22 RHPDGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGV-----LTKRSTRVSLTFRRVRDPSVACPCNFEESCDRNTPVATA 270
R P G V LPR S LVM+G ARY WSHGI RK+D+ GV LT R TRVSLT RR+R AC C + CD P A A
Sbjct: 243 RPPPGGATAAVRLPRRSALVMDGEARYLWSHGIVPRKSDVTAGVGGDLTLTPRGTRVSLTLRRLR--RAACHCRHPQQCDSRQPAADA 328
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: A0A7R9VHP1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VHP1_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 5.790e-15 Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 31 DGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKRSTRVSLTFRRVRDPSVACPCNFEESCDRNTPVATATYL 279
D + + + LPR SLL+M G ARY W HGI +R+TDMV G R RVSLT R+VR AC C + ESCD + T L
Sbjct: 156 DASQRRLLLLPRRSLLIMTGEARYAWRHGILARRTDMVGGAALPRDRRVSLTLRKVR--GFACNCEYPESCDSQSAPLQPTRL 236
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: UPI0015A8EAB5 (alkylated DNA repair protein alkB homolog 8 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A8EAB5) HSP 1 Score: 78.6 bits (192), Expect = 8.250e-15 Identity = 46/99 (46.46%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 10 VMDMRHPDGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKG----------------VLTKRSTRVSLTFRRVRDPSVACPCNFEESCDRNTP 258
VMD RHPDG V V LP SLLVM+G +RY W+HGI RK D+V L+KR TR S TFRRVR +AC C + +CD P
Sbjct: 261 VMDFRHPDGRSVA-VVLPERSLLVMKGESRYLWTHGITPRKFDVVPAGDTVSSGPVTSDPGDLTLSKRDTRTSFTFRRVR--RMACDCAYPSACDSRRP 356
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: A0A6U3ZEE3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3ZEE3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 9.870e-15 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 40 RVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKRSTRVSLTFRRVRDPSVACPCNFE 234
R K ++L R SLLV+ G ARY+WSHGIA R+ D V G L +R+TR+S TFR V+ P C C E
Sbjct: 29 RNKLLWLKRRSLLVLNGEARYDWSHGIAPRRLDRVGGDLRRRTTRISFTFRYVQGPGAKCQCGCE 93
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Match: A0A553QPZ4_9TELE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QPZ4_9TELE) HSP 1 Score: 77.4 bits (189), Expect = 2.010e-14 Identity = 46/104 (44.23%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 10 VMDMRHPDGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMV-------KGVLT---------KRSTRVSLTFRRVRDPSVACPCNFEESCDRNTPVATAT 273
VMD +HPDG R V LP SLLVM+G +RY W+HGI RKTD+V GV+T +R TR SLTFR++R C C++ CD P + T
Sbjct: 111 VMDFKHPDG-RCVAVVLPERSLLVMKGESRYLWTHGITPRKTDVVPVSETRGSGVMTSDLSNLTLSRRETRTSLTFRKIRRHP--CKCSYPSVCDSQLPGSPPT 211 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13392.5947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13392.5947.1 >prot_M-pyrifera_M_contig13392.5947.1 ID=prot_M-pyrifera_M_contig13392.5947.1|Name=mRNA_M-pyrifera_M_contig13392.5947.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp MDMRHPDGVRVKNVYLPRGSLLVMEGAARYEWSHGIASRKTDMVKGVLTKback to top mRNA from alignment at M-pyrifera_M_contig13392:6448..8705- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13392.5947.1 ID=mRNA_M-pyrifera_M_contig13392.5947.1|Name=mRNA_M-pyrifera_M_contig13392.5947.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2258bp|location=Sequence derived from alignment at M-pyrifera_M_contig13392:6448..8705- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13392:6448..8705- >mRNA_M-pyrifera_M_contig13392.5947.1 ID=mRNA_M-pyrifera_M_contig13392.5947.1|Name=mRNA_M-pyrifera_M_contig13392.5947.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig13392:6448..8705- (Macrocystis pyrifera P11B4 male)back to top |