mRNA_M-pyrifera_M_contig1336.5932.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE) HSP 1 Score: 424 bits (1091), Expect = 4.040e-141 Identity = 271/475 (57.05%), Postives = 320/475 (67.37%), Query Frame = 1
Query: 10 KRPEERALGDILMTEDKQGGSEQAERGERVRVEGVSMEPPGFLKRLFSVPKNVRKTAAAGDVVVPVIGARDGWGGIRQARKKGLANRGIFPGVEYRILEISISSEFESEXXXXXXXXXXXXXXXXXXXESTLSSLXXXXXXXXXXXXXXXXXXSTGGNINIAKSAREAPDGTFDGGGLVFTMRPVYPLVARLER-PWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFGL 1431
KRPEERALGD+L+ ED GG+ + + + GVS+EPPGFLKR+FS+PKNVR+TAAAGDVVVPVIGARDGWGGIRQA +N+GI+PGVEYRILEIS+ + S+ XXXXXXXXXXXXXXX + SAR+AP +FD G LVFTMRP+YPLVARLER WPVRVPAREFPV+LTPFSYNAATAWAA TTSLSLL+VGFVLSQALTLS I+SHSMEPTLQ VGDVVLVEKVSR+ L++ +DIV+F PPPVL+ +VS AGG L+ DLFVKRVAAL GDTV+V ADG VDV + R +G + G +A +A + G AAA ALP++VL+RIT ++KVL G+VFVLGDNP+ASMDSRVWG+LD+ EIVGHALLRVFPP++FGL
Sbjct: 90 KRPEERALGDVLIPEDAPGGAGEGGGDDAI---GVSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQA-----SNQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQ-------VGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNG--------GSAAGGESDVILGDGVAGQEGSAAAVAAAKGGTLAEEKV------------ALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGL 529
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA) HSP 1 Score: 178 bits (451), Expect = 7.960e-45 Identity = 124/306 (40.52%), Postives = 148/306 (48.37%), Query Frame = 1
Query: 499 SAREAPDGTFDGGGLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRDDIVFFSPPPVLRKVVSDAGGK-LNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFP 1413
S +AP F+ G L+ +RP+YPL+ RLER WPV V AR+ P+ LT F+YN ATAWAAL LTLSFI S SMEP L+ GDVVLVEKVSR +L+RR ++VFF+PPP LR V+DAGG L GDLFVKRVAAL GD V+V DG+ V +L+RG G + AA A G+ FVLGDNP S+DSRVWG+L IVG LLRVFP
Sbjct: 22 SVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRP-------GDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRV----RGALVRGA---------------------------------------GDLPRAARSRLLLR------EAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFP 271
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC) HSP 1 Score: 150 bits (379), Expect = 4.570e-37 Identity = 126/302 (41.72%), Postives = 152/302 (50.33%), Query Frame = 1
Query: 544 VFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIR---RDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVK----VLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFG 1428
V T+RP Y LV +LER WPV + E P+ LTP YN AT + L ++ LLAV V SQ +L +I S+SMEPTL GDV+LVEKVSR L+R DIV F+PP LR V AGG+L GDLFVKRVAA GD V+V D + + V P E EE G A A +GRG A P AG P VA++ VL G V+VLGDNP S+DSR+WGEL E EIVGH ++R+FP FG
Sbjct: 160 VITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHK-------GDVLLVEKVSR--LVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTV--DNGLPTINGHTYVYP----------EPEEPPTIGSDAPPARADGSMQRLA--------IGRG-------------------FAWPYAGE--APSQ-----WVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFG 406
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.600e-34 Identity = 84/158 (53.16%), Postives = 112/158 (70.89%), Query Frame = 1
Query: 538 GLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRD---DIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDV 1002
G + ++PVYPLVA+LERPWPVRV R+ P L TP YN +A+ +L T+ S L V F+LSQA++L FI S SM+PTL+ VGDV+LV+KVS + R++ D+V FSPP L+++V+ GG L++ DLFVKR+AA PGD V+V DGKVDV
Sbjct: 391 GADYELKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLK-------VGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDV 541
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE) HSP 1 Score: 134 bits (338), Expect = 1.040e-32 Identity = 101/302 (33.44%), Postives = 137/302 (45.36%), Query Frame = 1
Query: 547 FTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRD---DIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKV--DVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFGLFP 1437
+ ++P+YPLV +LERPWPV V E P L T YN +A +L T+ L V + LSQ ++L FI S SM+PT L VGDVV+VEKVS + D++ F PP L+++V +GG++ N DLFVKRVAA P V+V +DGKV D +++ M E P ++ R +Q VFV+GD S S+DSRVWG L +EI+G L RV+P + FG P
Sbjct: 20 YDLKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPT-------LAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLIDEMELQEKRDMCSEE---------------------------------------------------------------------PLGLIERYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFGSIP 245
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC) HSP 1 Score: 135 bits (341), Expect = 9.110e-31 Identity = 114/306 (37.25%), Postives = 145/306 (47.39%), Query Frame = 1
Query: 538 GLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRA-----SLIRRDDIVFFSPP-PVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFGLFP 1437
G + ++PVYPLV +LERPWPVRV R+ P LLTP YN +A +L T+L+ L V FVLSQA++L I S SM PTL GDVVLV+K++ + I D+VFF PP P+ VV G +L DLFVKRVAA PGD ++V G V V PA +AR T A R I A A P+N + G V VLGD S S+DSRVWG L + +IVG ++R++PP +G P
Sbjct: 351 GADYELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAK-------GDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGATPA--------------------------------------VARE------TCEAEPL----------RLIEAYLKKASPDN-----PDGANVRIGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWGPVP 590
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S1BHK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHK1_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.020e-23 Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 526 FDGGGLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRR---DDIVFFSPPPVLRKVVSDAGGKLNN 924
FD G+ + ++PVYPLVA +ER WPVR+ +E ++TP YN TA+ A++T++S L F++S A++L FI S SM+PTL+ VGDV+LVEK+S + R D+V F PPP LR +V+ GG+L +
Sbjct: 104 FDQPGVDYEVKPVYPLVASMERQWPVRIAEKELTKIITPLQYNILTAFGAVSTAVSTLVTFFLISLAVSLFFIPSKSMDPTLR-------VGDVLLVEKISPRLPLHRYAVGDVVMFRPPPALRDIVARNGGRLTD 232
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S4KZX7_GUITH (Mitochondrial inner membrane protease subunit (Fragment) n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZX7_GUITH) HSP 1 Score: 111 bits (277), Expect = 1.790e-22 Identity = 92/288 (31.94%), Postives = 133/288 (46.18%), Query Frame = 1
Query: 544 VFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVS-RASL-IRRDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALL 1401
+ +RP+Y + L+R WPVRV E PV +T YN AT SL LL G + +A++L I S SMEPT+ A GD+++VEK++ R + ++R++I+ FSPP L ++V GG+L GDLFVKRVA LP ++ V DG+V + SL+ E + + GEAT+ R +P G V+ ++ VLGD + S+DSRVWG LD ++ G LL
Sbjct: 352 ILKVRPIYAVRKDLDRSWPVRVSMGEIPVAVTQAMYNTATLIIVTMASLGLLMSGLIAREAISLYKIPSRSMEPTIMA-------GDLLVVEKMTARLGVPLKRNEIILFSPPEELERIVRSNGGRLRGGDLFVKRVAGLPHESFKVSGDGRVLLDGKSSESLLA-----ERKNLCEPDKRTGEATSS--------------------------------------RILPKEG------------------VIPDKSLLVLGDCKAVSVDSRVWGPLDASKVKGRPLL 571
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN) HSP 1 Score: 102 bits (253), Expect = 2.780e-20 Identity = 69/176 (39.20%), Postives = 99/176 (56.25%), Query Frame = 1
Query: 481 NINIAKSAREAPDGTFDGGGLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRA-SLIRRDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSV-RADGKVDV 1002
+I+ ++ P+G G + ++RP+YPL RLERPWPV V + + P LT YN+ T S+S++ +A++ I S SMEPT+ GD++L EK+S +R +I+ F+PP L+ VV GG + DLF+KRVAALPGD V+V ADG V V
Sbjct: 91 DIDTKETLFRVPEGA---GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHR-------GDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTV 256
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: F0YDK1_AURAN (Mitochondrial inner membrane protease subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDK1_AURAN) HSP 1 Score: 96.7 bits (239), Expect = 2.400e-17 Identity = 66/155 (42.58%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 553 MRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLL-AVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRD----DIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDV 1002
+RP+YPLV RLERPWP +P P+ L P SY A TA +A+ +L++L + + ++LS + + SMEP + GDV+LVEK S +L+RR ++V F+PPP LR + A + L+VKRVAA+ GD V+V ADG V V
Sbjct: 1869 VRPLYPLVPRLERPWPATLPEAAVPLALAPASYTALTAASAVGGALAILGSAALAAAVFVSLSVVPTRSMEPGIAP-------GDVLLVEKTS--ALLRRPPKAGEVVLFAPPPPLRAIAKIADDRA----LYVKRVAAVAGDVVAVDADGGVAV 2010 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1336.5932.1 >prot_M-pyrifera_M_contig1336.5932.1 ID=prot_M-pyrifera_M_contig1336.5932.1|Name=mRNA_M-pyrifera_M_contig1336.5932.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=480bp LRRKRPEERALGDILMTEDKQGGSEQAERGERVRVEGVSMEPPGFLKRLFback to top mRNA from alignment at M-pyrifera_M_contig1336:11607..15351+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1336.5932.1 ID=mRNA_M-pyrifera_M_contig1336.5932.1|Name=mRNA_M-pyrifera_M_contig1336.5932.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3745bp|location=Sequence derived from alignment at M-pyrifera_M_contig1336:11607..15351+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1336:11607..15351+ >mRNA_M-pyrifera_M_contig1336.5932.1 ID=mRNA_M-pyrifera_M_contig1336.5932.1|Name=mRNA_M-pyrifera_M_contig1336.5932.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2880bp|location=Sequence derived from alignment at M-pyrifera_M_contig1336:11607..15351+ (Macrocystis pyrifera P11B4 male)back to top |