mRNA_M-pyrifera_M_contig1336.5932.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1336.5932.1
Unique NamemRNA_M-pyrifera_M_contig1336.5932.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 4.040e-141
Identity = 271/475 (57.05%), Postives = 320/475 (67.37%), Query Frame = 1
Query:   10 KRPEERALGDILMTEDKQGGSEQAERGERVRVEGVSMEPPGFLKRLFSVPKNVRKTAAAGDVVVPVIGARDGWGGIRQARKKGLANRGIFPGVEYRILEISISSEFESEXXXXXXXXXXXXXXXXXXXESTLSSLXXXXXXXXXXXXXXXXXXSTGGNINIAKSAREAPDGTFDGGGLVFTMRPVYPLVARLER-PWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFGL 1431
            KRPEERALGD+L+ ED  GG+ +    + +   GVS+EPPGFLKR+FS+PKNVR+TAAAGDVVVPVIGARDGWGGIRQA     +N+GI+PGVEYRILEIS+     +                     S+    XXXXXXXXXXXXXXX          +  SAR+AP  +FD G LVFTMRP+YPLVARLER  WPVRVPAREFPV+LTPFSYNAATAWAA TTSLSLL+VGFVLSQALTLS I+SHSMEPTLQ       VGDVVLVEKVSR+ L++ +DIV+F PPPVL+ +VS AGG L+  DLFVKRVAAL GDTV+V ADG VDV       + R  +G    + G         +A            +A + G     AAA                      ALP++VL+RIT  ++KVL  G+VFVLGDNP+ASMDSRVWG+LD+ EIVGHALLRVFPP++FGL
Sbjct:   90 KRPEERALGDVLIPEDAPGGAGEGGGDDAI---GVSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQA-----SNQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQ-------VGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNG--------GSAAGGESDVILGDGVAGQEGSAAAVAAAKGGTLAEEKV------------ALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGL 529          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA)

HSP 1 Score: 178 bits (451), Expect = 7.960e-45
Identity = 124/306 (40.52%), Postives = 148/306 (48.37%), Query Frame = 1
Query:  499 SAREAPDGTFDGGGLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRDDIVFFSPPPVLRKVVSDAGGK-LNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFP 1413
            S  +AP   F+ G L+  +RP+YPL+ RLER WPV V AR+ P+ LT F+YN ATAWAAL                LTLSFI S SMEP L+        GDVVLVEKVSR +L+RR ++VFF+PPP LR  V+DAGG  L  GDLFVKRVAAL GD V+V  DG+  V      +L+RG                                        G +  AA              A                           G+ FVLGDNP  S+DSRVWG+L    IVG  LLRVFP
Sbjct:   22 SVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRP-------GDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRV----RGALVRGA---------------------------------------GDLPRAARSRLLLR------EAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFP 271          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC)

HSP 1 Score: 150 bits (379), Expect = 4.570e-37
Identity = 126/302 (41.72%), Postives = 152/302 (50.33%), Query Frame = 1
Query:  544 VFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIR---RDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVK----VLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFG 1428
            V T+RP Y LV +LER WPV +   E P+ LTP  YN AT  + L ++  LLAV  V SQ  +L +I S+SMEPTL         GDV+LVEKVSR  L+R     DIV F+PP  LR  V  AGG+L  GDLFVKRVAA  GD V+V  D  +  +     V P          E EE    G     A A                +GRG                    A P AG    P        VA++ VL  G V+VLGDNP  S+DSR+WGEL E EIVGH ++R+FP   FG
Sbjct:  160 VITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHK-------GDVLLVEKVSR--LVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTV--DNGLPTINGHTYVYP----------EPEEPPTIGSDAPPARADGSMQRLA--------IGRG-------------------FAWPYAGE--APSQ-----WVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFG 406          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.600e-34
Identity = 84/158 (53.16%), Postives = 112/158 (70.89%), Query Frame = 1
Query:  538 GLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRD---DIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDV 1002
            G  + ++PVYPLVA+LERPWPVRV  R+ P L TP  YN  +A+ +L T+ S L V F+LSQA++L FI S SM+PTL+       VGDV+LV+KVS  +  R++   D+V FSPP  L+++V+  GG L++ DLFVKR+AA PGD V+V  DGKVDV
Sbjct:  391 GADYELKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLK-------VGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDV 541          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE)

HSP 1 Score: 134 bits (338), Expect = 1.040e-32
Identity = 101/302 (33.44%), Postives = 137/302 (45.36%), Query Frame = 1
Query:  547 FTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRD---DIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKV--DVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFGLFP 1437
            + ++P+YPLV +LERPWPV V   E P L T   YN  +A  +L T+   L V + LSQ ++L FI S SM+PT       L VGDVV+VEKVS       +   D++ F PP  L+++V  +GG++ N DLFVKRVAA P   V+V +DGKV  D +++     M   E                                                                     P  ++ R        +Q   VFV+GD  S S+DSRVWG L  +EI+G  L RV+P + FG  P
Sbjct:   20 YDLKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPT-------LAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLIDEMELQEKRDMCSEE---------------------------------------------------------------------PLGLIERYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFGSIP 245          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC)

HSP 1 Score: 135 bits (341), Expect = 9.110e-31
Identity = 114/306 (37.25%), Postives = 145/306 (47.39%), Query Frame = 1
Query:  538 GLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRA-----SLIRRDDIVFFSPP-PVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALLRVFPPQAFGLFP 1437
            G  + ++PVYPLV +LERPWPVRV  R+ P LLTP  YN  +A  +L T+L+ L V FVLSQA++L  I S SM PTL         GDVVLV+K++       + I   D+VFF PP P+   VV   G +L   DLFVKRVAA PGD ++V   G V V    PA                                      +AR       T  A             R I A    A P+N            +  G V VLGD  S S+DSRVWG L + +IVG  ++R++PP  +G  P
Sbjct:  351 GADYELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAK-------GDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGATPA--------------------------------------VARE------TCEAEPL----------RLIEAYLKKASPDN-----PDGANVRIGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWGPVP 590          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S1BHK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHK1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.020e-23
Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = 1
Query:  526 FDGGGLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRR---DDIVFFSPPPVLRKVVSDAGGKLNN 924
            FD  G+ + ++PVYPLVA +ER WPVR+  +E   ++TP  YN  TA+ A++T++S L   F++S A++L FI S SM+PTL+       VGDV+LVEK+S    + R    D+V F PPP LR +V+  GG+L +
Sbjct:  104 FDQPGVDYEVKPVYPLVASMERQWPVRIAEKELTKIITPLQYNILTAFGAVSTAVSTLVTFFLISLAVSLFFIPSKSMDPTLR-------VGDVLLVEKISPRLPLHRYAVGDVVMFRPPPALRDIVARNGGRLTD 232          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S4KZX7_GUITH (Mitochondrial inner membrane protease subunit (Fragment) n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZX7_GUITH)

HSP 1 Score: 111 bits (277), Expect = 1.790e-22
Identity = 92/288 (31.94%), Postives = 133/288 (46.18%), Query Frame = 1
Query:  544 VFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVS-RASL-IRRDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGEEEEGGRRGEGRGEATAXXXXXXXXXXXXIARRVGRGGVTAAATXXXXXXXXXAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDSRVWGELDEREIVGHALL 1401
            +  +RP+Y +   L+R WPVRV   E PV +T   YN AT       SL LL  G +  +A++L  I S SMEPT+ A       GD+++VEK++ R  + ++R++I+ FSPP  L ++V   GG+L  GDLFVKRVA LP ++  V  DG+V +      SL+      E +      +  GEAT+                                       R +P  G                  V+   ++ VLGD  + S+DSRVWG LD  ++ G  LL
Sbjct:  352 ILKVRPIYAVRKDLDRSWPVRVSMGEIPVAVTQAMYNTATLIIVTMASLGLLMSGLIAREAISLYKIPSRSMEPTIMA-------GDLLVVEKMTARLGVPLKRNEIILFSPPEELERIVRSNGGRLRGGDLFVKRVAGLPHESFKVSGDGRVLLDGKSSESLLA-----ERKNLCEPDKRTGEATSS--------------------------------------RILPKEG------------------VIPDKSLLVLGDCKAVSVDSRVWGPLDASKVKGRPLL 571          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN)

HSP 1 Score: 102 bits (253), Expect = 2.780e-20
Identity = 69/176 (39.20%), Postives = 99/176 (56.25%), Query Frame = 1
Query:  481 NINIAKSAREAPDGTFDGGGLVFTMRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRA-SLIRRDDIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSV-RADGKVDV 1002
            +I+  ++    P+G    G +  ++RP+YPL  RLERPWPV V + + P  LT   YN+ T       S+S++       +A++   I S SMEPT+         GD++L EK+S      +R +I+ F+PP  L+ VV   GG +   DLF+KRVAALPGD V+V  ADG V V
Sbjct:   91 DIDTKETLFRVPEGA---GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHR-------GDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTV 256          
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Match: F0YDK1_AURAN (Mitochondrial inner membrane protease subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDK1_AURAN)

HSP 1 Score: 96.7 bits (239), Expect = 2.400e-17
Identity = 66/155 (42.58%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  553 MRPVYPLVARLERPWPVRVPAREFPVLLTPFSYNAATAWAALTTSLSLL-AVGFVLSQALTLSFISSHSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRD----DIVFFSPPPVLRKVVSDAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDV 1002
            +RP+YPLV RLERPWP  +P    P+ L P SY A TA +A+  +L++L +     +  ++LS + + SMEP +         GDV+LVEK S  +L+RR     ++V F+PPP LR +   A  +     L+VKRVAA+ GD V+V ADG V V
Sbjct: 1869 VRPLYPLVPRLERPWPATLPEAAVPLALAPASYTALTAASAVGGALAILGSAALAAAVFVSLSVVPTRSMEPGIAP-------GDVLLVEKTS--ALLRRPPKAGEVVLFAPPPPLRAIAKIADDRA----LYVKRVAAVAGDVVAVDADGGVAV 2010          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1336.5932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L442_9PHAE4.040e-14157.05Peptidase_S26 domain-containing protein n=2 Tax=Ec... [more]
A0A835YRZ1_9STRA7.960e-4540.52Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A0G4EFP7_VITBC4.570e-3741.72Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A448ZBV4_9STRA3.600e-3453.16Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S1CZJ0_CYCTE1.040e-3233.44Mitochondrial inner membrane protease subunit n=1 ... [more]
B7G479_PHATC9.110e-3137.25Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S1BHK1_9STRA5.020e-2344.85Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S4KZX7_GUITH1.790e-2231.94Mitochondrial inner membrane protease subunit (Fra... [more]
A0A7S0Y0G9_HEMAN2.780e-2039.20Mitochondrial inner membrane protease subunit n=2 ... [more]
F0YDK1_AURAN2.400e-1742.58Mitochondrial inner membrane protease subunit n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1336contigM-pyrifera_M_contig1336:11607..15351 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.2
Seed ortholog evalue1.9e-94
Seed eggNOG ortholog2880.D8LKT2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Peptidase S24-like
EggNOG OGs2CZ78@1,2S8VM@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1440
Cds size1440
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1336.5932.1prot_M-pyrifera_M_contig1336.5932.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1336 11607..15351 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815814.900516-CDS-M-pyrifera_M_contig1336:11606..118611622815814.900516-CDS-M-pyrifera_M_contig1336:11606..11861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 11607..11861 +
1692277584.2145762-CDS-M-pyrifera_M_contig1336:11606..118611692277584.2145762-CDS-M-pyrifera_M_contig1336:11606..11861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 11607..11861 +
1622815814.9120848-CDS-M-pyrifera_M_contig1336:12771..130121622815814.9120848-CDS-M-pyrifera_M_contig1336:12771..13012Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 12772..13012 +
1692277584.22644-CDS-M-pyrifera_M_contig1336:12771..130121692277584.22644-CDS-M-pyrifera_M_contig1336:12771..13012Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 12772..13012 +
1622815814.9263604-CDS-M-pyrifera_M_contig1336:13093..133921622815814.9263604-CDS-M-pyrifera_M_contig1336:13093..13392Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 13094..13392 +
1692277584.2360704-CDS-M-pyrifera_M_contig1336:13093..133921692277584.2360704-CDS-M-pyrifera_M_contig1336:13093..13392Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 13094..13392 +
1622815814.9390426-CDS-M-pyrifera_M_contig1336:14706..153511622815814.9390426-CDS-M-pyrifera_M_contig1336:14706..15351Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 14707..15351 +
1692277584.2463179-CDS-M-pyrifera_M_contig1336:14706..153511692277584.2463179-CDS-M-pyrifera_M_contig1336:14706..15351Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1336 14707..15351 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1336.5932.1

>prot_M-pyrifera_M_contig1336.5932.1 ID=prot_M-pyrifera_M_contig1336.5932.1|Name=mRNA_M-pyrifera_M_contig1336.5932.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=480bp
LRRKRPEERALGDILMTEDKQGGSEQAERGERVRVEGVSMEPPGFLKRLF
SVPKNVRKTAAAGDVVVPVIGARDGWGGIRQARKKGLANRGIFPGVEYRI
LEISISSEFESESKNESASDSNSKGDSKSESESTLSSLSKSESSPDSETY
SDPDSESTGGNINIAKSAREAPDGTFDGGGLVFTMRPVYPLVARLERPWP
VRVPAREFPVLLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSFISS
HSMEPTLQASRSFLLVGDVVLVEKVSRASLIRRDDIVFFSPPPVLRKVVS
DAGGKLNNGDLFVKRVAALPGDTVSVRADGKVDVVKVLPASLMRGGEGGE
EEEGGRRGEGRGEATAGGGESLAGGGSAIARRVGRGGVTAAATVAGGGGR
GGAGGRAIPAAGADALPENVLRRITVAEKKVLQRGTVFVLGDNPSASMDS
RVWGELDEREIVGHALLRVFPPQAFGLFP*
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mRNA from alignment at M-pyrifera_M_contig1336:11607..15351+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1336.5932.1 ID=mRNA_M-pyrifera_M_contig1336.5932.1|Name=mRNA_M-pyrifera_M_contig1336.5932.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3745bp|location=Sequence derived from alignment at M-pyrifera_M_contig1336:11607..15351+ (Macrocystis pyrifera P11B4 male)
TTGCGTCGAAAGAGACCCGAAGAGCGAGCGCTCGGAGACATCCTGATGAC GGAAGACAAGCAGGGAGGAAGCGAGCAGGCGGAGCGGGGGGAGAGGGTGA GGGTGGAGGGCGTGTCAATGGAGCCCCCGGGTTTCCTAAAGAGGCTTTTC TCCGTTCCGAAGAACGTCCGCAAAACGGCAGCCGCCGGTGATGTCGTGGT ACCCGTCATCGGCGCTCGTGATGGGTGGGGAGGGATCCGACAGGCAAGGA AAAAGGTCTTTTTTTGTGTGTTTCAATTCCAACGTTTTGCTTTCAATGTC CTTCGGTTTGGACGTTCTGTTTGTTGCGTTGCTTCGTTGTTTTGCTGTCT TTTTGGTGTTGTTCTTTTGGTGCGCTCTGGCTCGATCGTGGTGCCTTCCG GAGACATTTTTTTGCTTGCTCGTTTTGGGTCGATCAAACGTGGCATCGCA CGGCACGATGATGGTGGTGATTGTAGCGTTGGTCTTGTTGTTGGTGGTGG TGTTGGTGATGATGTCGGTACATATTGGTTTTCTGTTGATGTCGGTGTTG GCATTGTTCATCTTCTGCTTACCAACGCTATCTTCTCGCATGCCGGCGTA AGAGGAAGGGGTGCGAACCTCCGGCGTTGCTACGATACATACATGCTGGT ACTTTTTTTTTTCATTCCATGTGTGTAACAGCGATGAGCGCGCTTCCAAC GAACAAAGAGTCAACTGCAGCACTTCGATCCGACTGGAGGCCGGCTGTAG TCCTTCCGCGGCGGCCGACCTTGATGAGGGCAGAGAGCCAGGTCCTCGAA ACGGTGATTCACTTGACCTCTTGGCGTCGTGATGTTTGATTGCTTGACCT CTCGGCCTCTCCCAATGTCTTGATGGGTTGGCTTGTTGACGTTTTGAGCC CCTTGGCTTGTTTATGCCTTCCATCTCTTGTTGTCTTCCTCTCTTGATCT CTGTATCTTCCCGACATAGAGAGGACCCGCATAAAAAATGCTGTAACTAC TGCCGTATTTCTATGTCTATCTCTGTAGAGATGCCCTCTGAGTGAGCGGG CATACGTTCTCGCCTCGTCCCCTCGGACACGCCCCTTACGCTTCCTGACC ATCACCACCTCACCATCCCCCTGTTGTGCTTGTGTGTGGTCGGTTCCTCT GCCCTAAATTTCTAGGGTCTAGCGAACCGTGGCATCTTTCCGGGCGTCGA ATACCGAATCCTCGAGATTTCAATCTCTTCCGAGTTCGAATCCGAATCCA AGAACGAGTCCGCTTCCGACTCCAACTCCAAAGGCGATTCAAAATCCGAA TCCGAATCAACCTTGAGTTCCCTATCCAAATCTGAATCCAGCCCCGATTC CGAAACCTATTCCGATCCCGATTCTGAGTCTACCGGAGGAAACATCAACA TTGCGAGTGGTTCTCCGCAGTCGCTGCAGCCGCCGCCGCCGTCGGTGCCA TCCTCTGAGACCTCCGAGACCGGCGTCCGGCTGCTAGAGTCCGCACGGGA GGCGCCGGATGGGACCTTCGACGGAGGCGGCCTGGTCTTCACCATGCGCC CGGTGTACCCACTCGTGGCGAGGCTGGAGCGGCCGTGGCCGGTCCGGGTT CCGGCGCGTGAGTTCCCCGTCCTGCTGACGCCGTTCTCATACAACGCGGC GACGGCGTGGGCCGCGCTGACGACGAGCCTCTCGTTGCTGGCGGTCGGTT TCGTGCTGAGCCAGGCGCTGACGCTGTCCTTTATCTCGAGCCACAGCATG GAGCCGACGCTGCAGGCGAGCAGGAGTTTTTTGCTTGTTTGTGCTTTTAT TCAGTGGTGCCTTTTTGTGTTTTTCGTTTCGTTTTGTTTTTATTGTAGTT GTTTTTGTGTGTTGTTTGTGTGTTTTTTGTGTATTCTGTGTTTGTTGTGC ATTGTCAATTCTTGCGTTTTATTTGTGTATTCGTGTGTGTGATTTGTGTT TGAATAGTGTTTTTAGCGTTTCGTTGTTTATGTTTTAATTTACGTATATA GCTGTGTTGCTTTTAGTTGCTTGGTTGCTTGATTGCTTGACTCTGTGTTT GGTTGCTCATTTCGTTGCTTGTTTTTTTTTAATTTTGTGTCCGCCTTGCT AGGGAGGATTCGGGTGGAGGCGGGAGTACGTTGCGAGGGGGGGGAGGGTC GGCCCCTTGTCATCTTTAAGTTGACTACAGAACCATCCCAAGAAAACCAT TGGATGAAGGCCGGCATGGCTCAGTGGCCTATCGCAATACGTTAGGGGGG TGGGAGGCGTCGTATCGATTTAGCCAGCGACACCGCCTGTTGTCATTCTG TGAAGCAACGCCTCGGCAACGTCCTCTCGCATCGCTTTCCAATTGTGAAC CTCTTTGTATACCTGATATACGATCGCGGTTTGACATAGCATTCGTCGTG TGACACAGCATGATGGATGGTTGGCTGGATGAATGGATAGATGGGTGGGT GGATGGATGGATGGATGGATGGATGGATGGATAGATGAATGGATGGATGG ATGGATGGATGGATGGATGGGTGGATGGATGGATGGGTGGATGGATGGAT GGATGGATGGATGGGTGGATGGATAGATGGATGGGTGGGTGGATGTATGC ATGGATGGATGGATGGGAAGACGGTACGAGCTAGTCGCGAGCTGGGTGTA CTGCCTTGCGCATGATCGCACGTTTCTACCGCACCAACGACACGCCCGCA GTTCACTTGCCACACACACGCACACAACACGCGCACACCCTCGTACACAC GCACGAACACAACACACGCACATGGACGCACACACTCGCACATAAACACT AACACACACACGAACAAACGAAGGCGTGAACATGCACACCGCGGCCCAAC CGAACGCAACCCAGTGCATCCCAAAGCGACGCAACGCGTAGCGTAGCGCA TAGCACAAAATGCTCAGCACAAGGCGACAAAATCGACGCAACAATCAGCC CACAGCCATACAGCTCACAATTTAACAACTTGTATGTGACATTTCCACGA ATTGTAGCTGGCAATCGACGAATTGAATTCTACGTAGCTGACAATTTAAC AACGTTTACCATGATTTTATGCTTTTTTAATAAAAACTGTAACAAAACAG GTCGGTGACGTGGTACTGGTGGAGAAGGTGTCGAGGGCCTCCCTGATCAG GCGCGACGACATCGTCTTCTTCAGCCCGCCCCCCGTTCTACGCAAGGTCG TGTCCGACGCGGGAGGAAAGCTCAACAACGGTGACCTCTTTGTCAAGCGC GTGGCCGCCCTTCCCGGCGACACCGTAAGCGTGCGAGCCGACGGAAAGGT AGACGTCGTTAAGGTCCTGCCCGCCTCTCTGATGAGGGGAGGAGAGGGAG GAGAAGAAGAGGAAGGAGGAAGAAGAGGAGAAGGGCGGGGGGAGGCAACA GCAGGAGGAGGAGAATCACTAGCCGGAGGAGGATCAGCGATAGCAAGAAG AGTTGGGAGGGGGGGGGTAACGGCGGCAGCAACAGTTGCAGGAGGAGGGG GAAGAGGAGGGGCAGGAGGGCGTGCGATACCCGCGGCAGGAGCAGACGCG CTGCCGGAGAACGTGCTGCGGCGAATAACAGTCGCGGAGAAGAAGGTCTT GCAGCGGGGTACGGTCTTCGTACTCGGGGATAACCCATCGGCCTCGATGG ACTCGAGGGTGTGGGGGGAGCTCGACGAGCGGGAGATCGTGGGGCACGCC CTGCTAAGGGTTTTCCCTCCGCAGGCGTTCGGTTTGTTTCCTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1336:11607..15351+

>mRNA_M-pyrifera_M_contig1336.5932.1 ID=mRNA_M-pyrifera_M_contig1336.5932.1|Name=mRNA_M-pyrifera_M_contig1336.5932.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2880bp|location=Sequence derived from alignment at M-pyrifera_M_contig1336:11607..15351+ (Macrocystis pyrifera P11B4 male)
TTGCGTCGAAAGAGACCCGAAGAGCGAGCGCTCGGAGACATCCTGATGAC
GGAAGACAAGCAGGGAGGAAGCGAGCAGGCGGAGCGGGGGGAGAGGGTGA
GGGTGGAGGGCGTGTCAATGGAGCCCCCGGGTTTCCTAAAGAGGCTTTTC
TCCGTTCCGAAGAACGTCCGCAAAACGGCAGCCGCCGGTGATGTCGTGGT
ACCCGTCATCGGCGCTCGTGATGGGTGGGGAGGGATCCGACAGGCAAGGA
AAAAGTTGCGTCGAAAGAGACCCGAAGAGCGAGCGCTCGGAGACATCCTG
ATGACGGAAGACAAGCAGGGAGGAAGCGAGCAGGCGGAGCGGGGGGAGAG
GGTGAGGGTGGAGGGCGTGTCAATGGAGCCCCCGGGTTTCCTAAAGAGGC
TTTTCTCCGTTCCGAAGAACGTCCGCAAAACGGCAGCCGCCGGTGATGTC
GTGGTACCCGTCATCGGCGCTCGTGATGGGTGGGGAGGGATCCGACAGGC
AAGGAAAAAGGGTCTAGCGAACCGTGGCATCTTTCCGGGCGTCGAATACC
GAATCCTCGAGATTTCAATCTCTTCCGAGTTCGAATCCGAATCCAAGAAC
GAGTCCGCTTCCGACTCCAACTCCAAAGGCGATTCAAAATCCGAATCCGA
ATCAACCTTGAGTTCCCTATCCAAATCTGAATCCAGCCCCGATTCCGAAA
CCTATTCCGATCCCGATTCTGAGTCTACCGGAGGAAACATCAACATTGCG
AGGTCTAGCGAACCGTGGCATCTTTCCGGGCGTCGAATACCGAATCCTCG
AGATTTCAATCTCTTCCGAGTTCGAATCCGAATCCAAGAACGAGTCCGCT
TCCGACTCCAACTCCAAAGGCGATTCAAAATCCGAATCCGAATCAACCTT
GAGTTCCCTATCCAAATCTGAATCCAGCCCCGATTCCGAAACCTATTCCG
ATCCCGATTCTGAGTCTACCGGAGGAAACATCAACATTGCGAAGTCCGCA
CGGGAGGCGCCGGATGGGACCTTCGACGGAGGCGGCCTGGTCTTCACCAT
GCGCCCGGTGTACCCACTCGTGGCGAGGCTGGAGCGGCCGTGGCCGGTCC
GGGTTCCGGCGCGTGAGTTCCCCGTCCTGCTGACGCCGTTCTCATACAAC
GCGGCGACGGCGTGGGCCGCGCTGACGACGAGCCTCTCGTTGCTGGCGGT
CGGTTTCGTGCTGAGCCAGGCGCTGACGCTGTCCTTTATCTCGAGCCACA
GCATGGAGCCGACGCTGCAGGCGAGCAGGAGTTTTTTGCTTAGTCCGCAC
GGGAGGCGCCGGATGGGACCTTCGACGGAGGCGGCCTGGTCTTCACCATG
CGCCCGGTGTACCCACTCGTGGCGAGGCTGGAGCGGCCGTGGCCGGTCCG
GGTTCCGGCGCGTGAGTTCCCCGTCCTGCTGACGCCGTTCTCATACAACG
CGGCGACGGCGTGGGCCGCGCTGACGACGAGCCTCTCGTTGCTGGCGGTC
GGTTTCGTGCTGAGCCAGGCGCTGACGCTGTCCTTTATCTCGAGCCACAG
CATGGAGCCGACGCTGCAGGCGAGCAGGAGTTTTTTGCTTGTCGGTGACG
TGGTACTGGTGGAGAAGGTGTCGAGGGCCTCCCTGATCAGGCGCGACGAC
ATCGTCTTCTTCAGCCCGCCCCCCGTTCTACGCAAGGTCGTGTCCGACGC
GGGAGGAAAGCTCAACAACGGTGACCTCTTTGTCAAGCGCGTGGCCGCCC
TTCCCGGCGACACCGTAAGCGTGCGAGCCGACGGAAAGGTAGACGTCGTT
AAGGTCCTGCCCGCCTCTCTGATGAGGGGAGGAGAGGGAGGAGAAGAAGA
GGAAGGAGGAAGAAGAGGAGAAGGGCGGGGGGAGGCAACAGCAGGAGGAG
GAGAATCACTAGCCGGAGGAGGATCAGCGATAGCAAGAAGAGTTGGGAGG
GGGGGGGTAACGGCGGCAGCAACAGTTGCAGGAGGAGGGGGAAGAGGAGG
GGCAGGAGGGCGTGCGATACCCGCGGCAGGAGCAGACGCGCTGCCGGAGA
ACGTGCTGCGGCGAATAACAGTCGCGGAGAAGAAGGTCTTGCAGCGGGGT
ACGGTCTTCGTACTCGGGGATAACCCATCGGCCTCGATGGACTCGAGGGT
GTGGGGGGAGCTCGACGAGCGGGAGATCGTGGGGCACGCCCTGCTAAGGG
TTTTCCCTCCGCAGGCGTTCGGTTTGTTTCCTTGAGTCGGTGACGTGGTA
CTGGTGGAGAAGGTGTCGAGGGCCTCCCTGATCAGGCGCGACGACATCGT
CTTCTTCAGCCCGCCCCCCGTTCTACGCAAGGTCGTGTCCGACGCGGGAG
GAAAGCTCAACAACGGTGACCTCTTTGTCAAGCGCGTGGCCGCCCTTCCC
GGCGACACCGTAAGCGTGCGAGCCGACGGAAAGGTAGACGTCGTTAAGGT
CCTGCCCGCCTCTCTGATGAGGGGAGGAGAGGGAGGAGAAGAAGAGGAAG
GAGGAAGAAGAGGAGAAGGGCGGGGGGAGGCAACAGCAGGAGGAGGAGAA
TCACTAGCCGGAGGAGGATCAGCGATAGCAAGAAGAGTTGGGAGGGGGGG
GGTAACGGCGGCAGCAACAGTTGCAGGAGGAGGGGGAAGAGGAGGGGCAG
GAGGGCGTGCGATACCCGCGGCAGGAGCAGACGCGCTGCCGGAGAACGTG
CTGCGGCGAATAACAGTCGCGGAGAAGAAGGTCTTGCAGCGGGGTACGGT
CTTCGTACTCGGGGATAACCCATCGGCCTCGATGGACTCGAGGGTGTGGG
GGGAGCTCGACGAGCGGGAGATCGTGGGGCACGCCCTGCTAAGGGTTTTC
CCTCCGCAGGCGTTCGGTTTGTTTCCTTGA
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