mRNA_M-pyrifera_M_contig1328.5902.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: D7FU09_ECTSI (Photolyase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU09_ECTSI) HSP 1 Score: 256 bits (655), Expect = 6.520e-80 Identity = 124/145 (85.52%), Postives = 133/145 (91.72%), Query Frame = 1
Query: 1 NSALTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVERVEAERPLLKQP 435
N+AL VLG+GLFAFLQGRIA TCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDA+GRATLF+ LGPQV VVR+DGGHCPHHEVA +VC A+S FV+RVE P L +P
Sbjct: 293 NAALAVLGTGLFAFLQGRIAETCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDADGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSGFVQRVEEGEPALVKP 437
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A6H5LA65_9PHAE (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA65_9PHAE) HSP 1 Score: 255 bits (651), Expect = 1.370e-76 Identity = 124/145 (85.52%), Postives = 132/145 (91.03%), Query Frame = 1
Query: 1 NSALTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVERVEAERPLLKQP 435
N+AL VLG+GLFAFLQGRIA TCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDA GRATLF+ LGPQV VVR+DGGHCPHHEVA +VC A+S FV+RVE P L +P
Sbjct: 560 NAALAVLGAGLFAFLQGRIAETCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAGGRATLFEALGPQVSVVRLDGGHCPHHEVAADVCAALSGFVQRVEEGEPALVKP 704
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A7S2UUB3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUB3_9STRA) HSP 1 Score: 171 bits (434), Expect = 6.600e-48 Identity = 82/133 (61.65%), Postives = 96/133 (72.18%), Query Frame = 1
Query: 1 NSALTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVE 399
N L G +F+FLQGRI TC N+YP NP V GLAE+ILRDSCDPGA+GVIAAGGKLP R ANE+L KFGGPVLVTQG+ DPLNDA+GR L ++ P ++ + GHCPHHEV EV A+ FVE
Sbjct: 205 NFVLQAFGFLIFSFLQGRIEKTCMNLYPTNPDPVKNGLAESILRDSCDPGAIGVIAAGGKLPTPRPANELLQKFGGPVLVTQGILDPLNDAKGRLDLLKKCYPNLEACSIQAGHCPHHEVPKEVSQAIKAFVE 337
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A836C8C6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C6_9STRA) HSP 1 Score: 165 bits (417), Expect = 4.780e-46 Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 1
Query: 1 NSALTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVER----VEAERPLLKQPV*MTH 450
N+ L+ + + +FA LQGRI TC+++YPV P VD GLA+NILRDS DPGA+G+ AG KLP+SRSANEML KFGGPVLV QG+ DPLNDA+ R FQE V+VV + GGHCP E+A EVC A++ F + ++E KQ V M++
Sbjct: 135 NAVLSAISTVIFAGLQGRIRQTCKSLYPVRPERVDGGLADNILRDSKDPGALGIFNAGAKLPYSRSANEMLAKFGGPVLVAQGLLDPLNDAKARVKQFQEAYEAVEVVPIQGGHCPQDEMAEEVCAAIAAFTRKHTQGSQSESASTKQEVVMSN 288
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A7S4D635_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D635_HETAK) HSP 1 Score: 154 bits (389), Expect = 1.510e-40 Identity = 76/134 (56.72%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 1 NSALTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVER 402
N L +GLF FLQGRI TC N+YP NP +V +GLA I RDSCDPGA GVIAAGGKLP R NE+ +FGGPVL QGV DPLNDA GRA + LG +V VR+D GHCPH E V + +F +
Sbjct: 23 NLVLGGFAAGLFYFLQGRIEKTCENLYPTNPSVVKQGLARAIFRDSCDPGATGVIAAGGKLPAPRPLNELFAEFGGPVLAVQGVLDPLNDARGRADALEALGAKV--VRIDAGHCPHDEQPALVAGPLREFAAK 154
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: I2CPL0_NANGC (Alpha beta hydrolase fold protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPL0_NANGC) HSP 1 Score: 147 bits (371), Expect = 4.170e-39 Identity = 70/134 (52.24%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 NSALTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVER 402
+ LT +GLF +LQ R+ C+++Y +P V L NI+RDSCDPGA+GV A+GG+LP RS NE++ KFGGPVLV QG+ DPLNDA+GRA L Q V+VV ++GGHC H E E C A++ FV R
Sbjct: 165 KAVLTAFSAGLFWYLQPRVEQICKDLYRHSPQEVGPRLVNNIVRDSCDPGALGVFASGGRLPSPRSTNELMAKFGGPVLVAQGILDPLNDAKGRAALLQAAWEDVEVVEIEGGHCVHDERPQETCAAMAAFVTR 298
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A4D9CZF8_9STRA (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF8_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.390e-37 Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 1 NSALTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVERV 405
+ LT +GLF +LQ R+ C+++Y +P V L NI+RDSCDPGA+GV A+GG+LP RS NE++ KFGGPVLV QG+ DPLNDA+GRA L Q V+VV ++GGHC H E E C A++ FV RV
Sbjct: 765 KAVLTAFSAGLFWYLQPRVEQICKDLYRHSPQEVGPRLVNNIVRDSCDPGALGVFASGGRLPSPRSTNELMAKFGGPVLVAQGILDPLNDAKGRAALLQAAWEDVEVVEIEGGHCVHDERPRETCAAMAAFVSRV 899
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A0G4GX81_VITBC (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GX81_VITBC) HSP 1 Score: 138 bits (348), Expect = 2.140e-33 Identity = 63/135 (46.67%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 10 LTVLGSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFVERVEAE 414
L + +GL+ +L+ + + C+ +YP N V++G+ + ILRDS DPGA+GVIA+G KLP RS NE++ KFG PVL+ QG+ DPLN+A R FQ LG ++ + GHCPH E+ TEV N + F++R EA+
Sbjct: 603 LQLFATGLYLYLKTQTPSICKRLYPTNGTAVEDGIIDCILRDSADPGAIGVIASGAKLPPQRSHNELIAKFGRPVLILQGLLDPLNNATARMEAFQRLGDLIETAPLPAGHCPHDELPTEVANEMVKFIQRTEAK 737
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A7S1GQH1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQH1_CYCTE) HSP 1 Score: 119 bits (297), Expect = 4.960e-29 Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 1
Query: 22 GSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGK--------------------FGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDFV 396
G+GL +L+ +IA+ C +YP NP D+ LA+ ILRDS DPGA+ V+ +G KLP R+ANE+L F GPVLV QG+ DPLND+ RA L L + V ++GGHCPH E+ +V A+ D++
Sbjct: 48 GNGLLQYLRPQIASLCTKLYPTNPSNADKNLADTILRDSLDPGAIHVMISGSKLPSPRTANELLAADFGSSLSSSKENSGGESESVFRGPVLVAQGMLDPLNDSPSRAKLLGGLRSDITVTPINGGHCPHDEMPHDVAKAIMDWM 192
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Match: A0A7S3V4N0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4N0_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.250e-27 Identity = 67/157 (42.68%), Postives = 89/157 (56.69%), Query Frame = 1
Query: 22 GSGLFAFLQGRIAATCRNVYPVNPGIVDEGLAENILRDSCDPGAVGVIAAGGKLPFSRSANEMLGK-------------------FGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEVATEVCNAVSDF-VERVEAERPLLKQ 432
G GL +L+ RI +TC N+YP NP VD L ILRDS DPGA+ V+ +G KLP R+ANE+LG F GPVLV QG+ DPLNDA+GRA + L + V ++ GHCPH E+ + + +VS + VE V + + Q
Sbjct: 759 GEGLLWYLRPRIQSTCINLYPTNPDAVDNNLCNGILRDSLDPGAINVMISGSKLPPPRTANELLGADFGSSKSSKSNSSKYEEGMFNGPVLVAQGLLDPLNDAKGRAEMLGNLRSGIVVDPINAGHCPHDELPSSIAKSVSKWMVETVSSTAEPISQ 915 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1328.5902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1328.5902.1 >prot_M-pyrifera_M_contig1328.5902.1 ID=prot_M-pyrifera_M_contig1328.5902.1|Name=mRNA_M-pyrifera_M_contig1328.5902.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp MLGKFGGPVLVTQGVKDPLNDAEGRATLFQELGPQVDVVRVDGGHCPHHEback to top mRNA from alignment at M-pyrifera_M_contig1328:7866..11710- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1328.5902.1 ID=mRNA_M-pyrifera_M_contig1328.5902.1|Name=mRNA_M-pyrifera_M_contig1328.5902.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3845bp|location=Sequence derived from alignment at M-pyrifera_M_contig1328:7866..11710- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1328:7866..11710- >mRNA_M-pyrifera_M_contig1328.5902.1 ID=mRNA_M-pyrifera_M_contig1328.5902.1|Name=mRNA_M-pyrifera_M_contig1328.5902.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig1328:7866..11710- (Macrocystis pyrifera P11B4 male)back to top |