mRNA_M-pyrifera_M_contig13279.5901.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig13279.5901.1
Unique NamemRNA_M-pyrifera_M_contig13279.5901.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A6H5KT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT12_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 1.990e-117
Identity = 182/226 (80.53%), Postives = 190/226 (84.07%), Query Frame = 1
Query:    1 MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            MNKTYLRYEL ETFGVVASPQSN ++DSTGNL ISAALHEVAVWNLRQCSLVRLLSPEG++               QVT+LLLSPDG+TVAAGYSSGLV+LFSL TGATAVTLHGHRSAVTAARYH+SGALLASGSADTDIVVWD VAESGLYRLRGHRDGVTDV FLEGG GG             GG RLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHEVAVWNLRQCSLVRLLSPEGESAASRA----------QVTSLLLSPDGRTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLEGGGGGA-----------PGGCRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 205          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 2.820e-104
Identity = 181/226 (80.09%), Postives = 189/226 (83.63%), Query Frame = 1
Query:    1 MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            MNKTYLRYEL ETFGVVASPQSN ++DSTGNL ISAALH+VAVWNLRQCSLVRLLSPEG++               QVT+LLLSPDG TVAAGYSSGLV+LFSL TGATAVTLHGHRSAVTAARYH+SGALLASGSADTDIVVWD VAESGLYRLRGHRDGVTDV FL       G  G  XXX   GG RLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAASRA----------QVTSLLLSPDGSTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFL-------GSGGXXXXXVVPGGCRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 209          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA)

HSP 1 Score: 243 bits (619), Expect = 4.510e-71
Identity = 132/224 (58.93%), Postives = 158/224 (70.54%), Query Frame = 1
Query:    7 KTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            KTYLRY L +TFGV+AS QSNA+FD TGNL I+AAL EVAVWNLRQ +L+R+L PEGD               GQV+ L LSP+G+ VAAGY++G++ ++ + TGA AV  +GH+SAVTAAR++  GALL SG ADTD+++WD VAE G  RLRGHRDGVTDVAFL         AGG           L  G  SCSKDTLVK+WDL+TQ CVQTVVGHR EV
Sbjct:    2 KTYLRYVLHDTFGVIASTQSNAVFDKTGNLAITAALQEVAVWNLRQGTLLRMLKPEGDEATIAK---------GQVSYLALSPNGRRVAAGYTTGVIRVYDVATGAMAVAFNGHKSAVTAARFNDGGALLISGGADTDVILWDMVAERGECRLRGHRDGVTDVAFLP--------AGG----------ALARGAVSCSKDTLVKIWDLETQHCVQTVVGHRSEV 198          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.230e-50
Identity = 111/228 (48.68%), Postives = 137/228 (60.09%), Query Frame = 1
Query:    1 MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSG--ALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            M K+YLRYE    FGVVA+   N IFD TG L I+ AL +V VWN+RQ S VR L  +G                GQ T L LSPDG  VAAGYS+G V +F L TGA  VTL GH SAV A  + + G  A+LASG+ DTD++VWD V+++GL+RL+GH+D VT + F+                    G R    L + SKD+L+K+WDLDTQ CVQT VGHR EV
Sbjct:    1 MVKSYLRYERETAFGVVAAAAGNVIFDRTGRLAIAPALKDVVVWNVRQGSFVRALRGDG----------------GQATALALSPDGALVAAGYSTGAVRVFRLATGALEVTLDGHASAVEALAFGARGGAAVLASGARDTDVIVWDLVSQTGLFRLKGHKDAVTALRFV--------------------GERDAR-LVTASKDSLLKVWDLDTQHCVQTCVGHRSEV 191          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A6U0TFN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TFN6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 3.870e-48
Identity = 102/228 (44.74%), Postives = 142/228 (62.28%), Query Frame = 1
Query:    1 MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGG--LGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            MN+TYLRY   ++FGV+ +P+ N+I   + +L I+ AL + AVWNL+Q SLV+ L PEG + G             +V+ LLL    + VAAGY+SGL+ +FSL  G   + LHGHR+ VTA    +  A LA+G+ DTD+VVWDT++E+G+ RL+GHR  +T V+FL+G D G  +GF                 GL S S+D L+K+WD+  Q C+QTV GHR EV
Sbjct:   24 MNRTYLRYVPQQSFGVICTPRGNSILGESEDLAITPALRDAAVWNLKQGSLVKRLRPEGGSGGVQEAE--------EVSQLLLLGRDR-VAAGYTSGLLRVFSLSEGRQELALHGHRTEVTALSCSTDAAFLATGAKDTDVVVWDTISETGVCRLKGHRHAITAVSFLQGRDSGTSVGFF----------------GLVSASQDALLKIWDVTAQHCLQTVTGHRAEV 226          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A7S1XLU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU6_9STRA)

HSP 1 Score: 175 bits (444), Expect = 4.130e-47
Identity = 101/229 (44.10%), Postives = 137/229 (59.83%), Query Frame = 1
Query:    1 MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLE---GGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            M +TYLRY     FGV+A+P+ N+++     L ++ +L +V VW+L+Q SL+R L+PE    G             +V +L L P G+ VAAGY+SG++ +F   TG   +  HGHRSAVT A   + GA LA+G++DTD+VVWD VAE+G+ RLRGHR  VT VAFL+    G  G GF                 G+ S S+D LVK+WD+  Q C+QTV GHR EV
Sbjct:   34 MQRTYLRYVPEHAFGVIATPRGNSLYAEGDQLALTPSLRDVGVWHLKQGSLLRRLTPESTTPGTEAE---------EVASLTLLPGGR-VAAGYTSGVLRVFDYKTGTQELAFHGHRSAVTCADGTADGAFLATGASDTDVVVWDAVAETGVCRLRGHRGAVTAVAFLQPKGSGGNGAGFF----------------GVVSASQDALVKVWDVAAQHCLQTVTGHRAEV 236          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A2G5BKB0_COERN (WD40 repeat-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKB0_COERN)

HSP 1 Score: 170 bits (431), Expect = 4.350e-45
Identity = 91/226 (40.27%), Postives = 134/226 (59.29%), Query Frame = 1
Query:    1 MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            M K+YLRYE   +FGV++SP  NA+FD +G   I+ AL +V VW++++ + +   +   +                +VT +  SP+GK  A GY+ G + LF L +    V L+GHR +++A  + S+G +LASG+ DTD+++WD V E+GLYRLRGH+D +TD+AF+E  +G                   +  + + SKDTLVKLWDL  Q CVQT+V HR EV
Sbjct:    1 MVKSYLRYEAHSSFGVISSPSGNAVFDHSGRYSITPALEKVIVWDIKKGTKIAQWADSDNKA--------------EVTRIARSPNGKDYAVGYADGSIRLFDLSSNRVNVVLNGHRGSLSALVFDSTGTILASGARDTDVIIWDVVGEAGLYRLRGHKDEITDIAFVEPANG----------PSTALNASTKGHVVTSSKDTLVKLWDLRAQHCVQTLVTHRSEV 202          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A485L7V7_9STRA (Aste57867_17075 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7V7_9STRA)

HSP 1 Score: 159 bits (401), Expect = 4.670e-41
Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 1
Query:    7 KTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFL 504
            K+YLRY    +FGV+ SP +  ++D TG L I  AL  V VWN+R  + VR L  E ++              GQVT L LSPDG  VAAGYSSG+V +F L  G   VTL GH+++V +  Y  +GALLASGS DTDI+VWD V++SGLYRLRGH+D VT + FL
Sbjct:   19 KSYLRYSAESSFGVICSPNARCVYDLTGQLAICGALKSVIVWNIRTGAQVRTLKGESESDT-----------AGQVTALCLSPDGLYVAAGYSSGIVRIFKLSNGNVEVTLDGHKNSVESLVYGDNGALLASGSRDTDIIVWDVVSQSGLYRLRGHKDAVTALTFL 173          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A433A2H4_9FUNG (WD40-repeat-containing domain protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433A2H4_9FUNG)

HSP 1 Score: 150 bits (379), Expect = 4.810e-41
Identity = 97/244 (39.75%), Postives = 126/244 (51.64%), Query Frame = 1
Query:    1 MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGY------------------SSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            M K YLRYE   TFG++AS QSNAI++  G L I+ AL +V VW+L++              G             +VT +  SP+    A GY                  + G + L+S  T   +VT +GHRSAVTA  +  +G  LASGS DTD++VWD V E GLYRLRGH+D +T + FL                     T   N L S SKDTL+KLWDL TQ CV+T++ HRGE+
Sbjct:    1 MVKAYLRYEPKATFGIIASVQSNAIYNRDGKLAIAPALEDVVVWDLKK--------------GTQVAKWHESTNKAEVTCIARSPNEVDYAVGYVFFSPALHHSRMNPFVPYNDGSIRLWSFKTSTCSVTFNGHRSAVTALAFDKNGTRLASGSRDTDLIVWDVVGEVGLYRLRGHKDQITCLYFLTRPTATDSATDATNATTT---TATSNYLLSSSKDTLLKLWDLTTQHCVETLIAHRGEI 227          
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Match: A0A7S3MF43_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MF43_9STRA)

HSP 1 Score: 158 bits (400), Expect = 6.690e-41
Identity = 93/224 (41.52%), Postives = 125/224 (55.80%), Query Frame = 1
Query:    7 KTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCSLVRLLSPEGDATGXXXXXXXXXXGVGQVTNLLLSPDGKTVAAGYSSGLVVLFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAESGLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGXXXXXXGGTRLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEV 678
            K+YLRYE  + FGV+ASPQ NA +D TGNL  + A+ EV  WNLRQ   V  LS +  +              G VT L  S     +A GY++G+V +++        TL GHRS +++  +      L SG AD+DIV+WD V+ + L RLRGH+D +T V+FL+                    T  +  L S SKDTL+K+WDL+TQ CVQTVVGHR E+
Sbjct:    2 KSYLRYEPKKQFGVIASPQCNAQYDYTGNLAFTGAIQEVCGWNLRQSVQVNKLSFDEPSYPFRTG--------GDVTILQTSSSKPIIAVGYTNGIVRIYNYLNETLVATLKGHRSMISSLCFDEESVTLVSGGADSDIVLWDLVSYTALCRLRGHKDAITGVSFLK--------------------TPQQQYLVSVSKDTLLKVWDLETQCCVQTVVGHRCEI 197          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13279.5901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT12_9PHAE1.990e-11780.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS39_ECTSI2.820e-10480.09Utp12 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835Z9P3_9STRA4.510e-7158.93WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A5D6Y6H3_9STRA2.230e-5048.68Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
A0A6U0TFN6_9STRA3.870e-4844.74Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1XLU6_9STRA4.130e-4744.10Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2G5BKB0_COERN4.350e-4540.27WD40 repeat-like protein n=1 Tax=Coemansia reversa... [more]
A0A485L7V7_9STRA4.670e-4151.20Aste57867_17075 protein n=1 Tax=Aphanomyces stella... [more]
A0A433A2H4_9FUNG4.810e-4139.75WD40-repeat-containing domain protein (Fragment) n... [more]
A0A7S3MF43_9STRA6.690e-4141.52Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig13279contigM-pyrifera_M_contig13279:6361..8474 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.1
Seed ortholog evalue2.5e-89
Seed eggNOG ortholog2880.D8LS39
Preferred nameWDR3
KEGG koko:K14556
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031090,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032040,GO:0032991,GO:0034388,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.snoRNA binding
EggNOG OGsKOG0306@1,KOG0306@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons2
Model size678
Cds size678
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815812.6949754-CDS-M-pyrifera_M_contig13279:6360..65131622815812.6949754-CDS-M-pyrifera_M_contig13279:6360..6513Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13279 6361..6513 +
1692277582.8471723-CDS-M-pyrifera_M_contig13279:6360..65131692277582.8471723-CDS-M-pyrifera_M_contig13279:6360..6513Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13279 6361..6513 +
1622815812.7065518-CDS-M-pyrifera_M_contig13279:7949..84741622815812.7065518-CDS-M-pyrifera_M_contig13279:7949..8474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13279 7950..8474 +
1692277582.8610613-CDS-M-pyrifera_M_contig13279:7949..84741692277582.8610613-CDS-M-pyrifera_M_contig13279:7949..8474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig13279 7950..8474 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig13279.5901.1prot_M-pyrifera_M_contig13279.5901.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig13279 6361..8474 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig13279.5901.1

>prot_M-pyrifera_M_contig13279.5901.1 ID=prot_M-pyrifera_M_contig13279.5901.1|Name=mRNA_M-pyrifera_M_contig13279.5901.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
MNKTYLRYELGETFGVVASPQSNAIFDSTGNLGISAALHEVAVWNLRQCS
LVRLLSPEGDATGGGGAAAAAAGGVGQVTNLLLSPDGKTVAAGYSSGLVV
LFSLHTGATAVTLHGHRSAVTAARYHSSGALLASGSADTDIVVWDTVAES
GLYRLRGHRDGVTDVAFLEGGDGGLGFAGGGAGTGSGGGTRLRNGLASCS
KDTLVKLWDLDTQSCVQTVVGHRGEV
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mRNA from alignment at M-pyrifera_M_contig13279:6361..8474+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig13279.5901.1 ID=mRNA_M-pyrifera_M_contig13279.5901.1|Name=mRNA_M-pyrifera_M_contig13279.5901.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2114bp|location=Sequence derived from alignment at M-pyrifera_M_contig13279:6361..8474+ (Macrocystis pyrifera P11B4 male)
ATGAATAAGACATACCTTCGTTATGAGCTCGGTGAGACTTTTGGTGTGGT TGCATCACCCCAGAGCAATGCCATCTTCGACTCGACCGGAAATTTGGGCA TCTCTGCAGCCCTCCACGAAGTGGCCGTGTGGAACCTACGGCAGTGCTCC TTGGTGAGAGAGAGACAGAGAGGCACACAAACAGACAGACAGACTGATAC GTAGACAATCAGACTGACAGAAACAGGGCGAAAGCTAACGCAGGAGGGCA GAATGAAGCATTGGCAGAAGCGTTCTCGCTGCAAGAACGTTATCATAGAG TTGAACGATGCGGAAATCGTGTGGCGTCCCACCGTCGATACAGCAGCGGC CAGTAGCTGCGTGATACCCCCGGTACCTGTGGTAAATGGCGAGGACGAGG CAGCAGCTGCAAGAAGATTGCGACGTTTTGGACGCGCGCCTCAGAGGCAA GGCATCCATGTTCGTTAATCAGCACGCTGTTACTGGTAGATTGGCAATGC CAATATTGCTCTCTGGCTGGCGTGCGGCTCGCCGCCCAATGTGCTGCCTG TAAAAATGGTACCGGCAAGCTGGTTTGTTTACGTGGGACCATAGTAAATA GGATCACCCGTGTATACAAAAACCTATATATTCCCTATTTTTACTAACAA TATTTAGTCCTATTTACTATGGTCCCCCGTACTACTGCTGTAGTATAGTG GTAACCTTGGGTATGTGGTATCTGGTGCCGGTACTGGTTGTACGGTCCTC AGCCACAGCAGAAGCACGTACCGTAAGGATGCGAGTCATCGCACTCCCCT AGTTTTTCAAAACTCGATTGCTCCACAACCAAGAGGATGGTTGAAAACAG ACCGACTTGTATAAGGAAAGCTCTCAACGAGACCTTTCCGATACCAGCCT CTTCTGCGTCGGCACATCGGCACCCTCCAGGTTGTGGAGCAATCGAGCTT TCAAAGTCGGTCTGGAGGGTGCGATGACTCGCATCCTTACGGTGCTCGTA TATACATGGCATGACCACAGCAGCAGCGGCCATCCGTGTTGTCGCCTCCA CCCGCACGCAGAGAGGAGAATGGCACCATGCAGCCTTCAGGGGTGAACAG CAGATGGGACACTATTAATAGCAGCATGGATAACATAAAGAGATTAGAGA GATATACCGGCACGCTTCGTCGCGCGACCACTGGTAGGTAGGTGCAGCTG ATAAAATGCCGCACCAAGGACTATTTTTACGTCCATCGCCTCTTGTGTCC CTCCGTCGACCACCTACGCACACAACTGCTGTTGTGAGCTGTGAGTGCTT GTCTTCCTTCCCTCTTGGCGAGCTCTACGTACGAGAGCCCACACCCCGAC CGCGACACGACATAGACAGCGAAAACGCACGGTATCAAATACTTGGTAAC TGGTACACTACAATACCTGGTAGACACTACAGTAGTAACAAGGCACCCCC CCCCTCCCCACCCGCCATCGTGCCCCCTCCCTCTACCGGCCAACTTGAAC AACAACTTTCCCCCCGTCCCCCCCTCCCCCCCTCACCCCTCACCCCACCC CAAACAAACAAAACGTCAAACACGTGCGACATGATAAAGGTCCGACTTCT CAGTCCGGAAGGTGACGCCACCGGGGGCGGCGGGGCCGCCGCCGCCGCCG CAGGCGGCGTGGGCCAGGTGACTAACCTCCTCCTCTCCCCCGATGGGAAG ACGGTCGCCGCCGGCTACTCATCCGGGCTGGTTGTGCTTTTCTCCCTCCA CACCGGCGCCACCGCCGTCACCCTCCACGGCCACCGGTCGGCTGTCACCG CCGCCCGCTACCACTCCTCGGGCGCCCTCCTGGCCAGCGGGTCCGCCGAC ACCGACATCGTCGTCTGGGACACCGTCGCCGAGTCGGGGCTCTACAGGCT CAGGGGCCACCGGGACGGCGTCACGGACGTGGCCTTTTTGGAAGGGGGGG ACGGCGGGTTAGGGTTCGCTGGGGGAGGGGCGGGGACGGGGTCGGGGGGA GGCACGAGGCTGCGCAACGGGCTGGCGTCTTGCAGCAAGGACACGCTGGT GAAGCTGTGGGACCTGGACACGCAGAGCTGCGTGCAGACGGTGGTGGGCC ATCGAGGAGAGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig13279:6361..8474+

>mRNA_M-pyrifera_M_contig13279.5901.1 ID=mRNA_M-pyrifera_M_contig13279.5901.1|Name=mRNA_M-pyrifera_M_contig13279.5901.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig13279:6361..8474+ (Macrocystis pyrifera P11B4 male)
ATGAATAAGACATACCTTCGTTATGAGCTCGGTGAGACTTTTGGTGTGGT
TGCATCACCCCAGAGCAATGCCATCTTCGACTCGACCGGAAATTTGGGCA
TCTCTGCAGCCCTCCACGAAGTGGCCGTGTGGAACCTACGGCAGTGCTCC
TTGATGAATAAGACATACCTTCGTTATGAGCTCGGTGAGACTTTTGGTGT
GGTTGCATCACCCCAGAGCAATGCCATCTTCGACTCGACCGGAAATTTGG
GCATCTCTGCAGCCCTCCACGAAGTGGCCGTGTGGAACCTACGGCAGTGC
TCCTTGGTCCGACTTCTCAGTCCGGAAGGTGACGCCACCGGGGGCGGCGG
GGCCGCCGCCGCCGCCGCAGGCGGCGTGGGCCAGGTGACTAACCTCCTCC
TCTCCCCCGATGGGAAGACGGTCGCCGCCGGCTACTCATCCGGGCTGGTT
GTGCTTTTCTCCCTCCACACCGGCGCCACCGCCGTCACCCTCCACGGCCA
CCGGTCGGCTGTCACCGCCGCCCGCTACCACTCCTCGGGCGCCCTCCTGG
CCAGCGGGTCCGCCGACACCGACATCGTCGTCTGGGACACCGTCGCCGAG
TCGGGGCTCTACAGGCTCAGGGGCCACCGGGACGGCGTCACGGACGTGGC
CTTTTTGGAAGGGGGGGACGGCGGGTTAGGGTTCGCTGGGGGAGGGGCGG
GGACGGGGTCGGGGGGAGGCACGAGGCTGCGCAACGGGCTGGCGTCTTGC
AGCAAGGACACGCTGGTGAAGCTGTGGGACCTGGACACGCAGAGCTGCGT
GCAGACGGTGGTGGGCCATCGAGGAGAGGTGGTCCGACTTCTCAGTCCGG
AAGGTGACGCCACCGGGGGCGGCGGGGCCGCCGCCGCCGCCGCAGGCGGC
GTGGGCCAGGTGACTAACCTCCTCCTCTCCCCCGATGGGAAGACGGTCGC
CGCCGGCTACTCATCCGGGCTGGTTGTGCTTTTCTCCCTCCACACCGGCG
CCACCGCCGTCACCCTCCACGGCCACCGGTCGGCTGTCACCGCCGCCCGC
TACCACTCCTCGGGCGCCCTCCTGGCCAGCGGGTCCGCCGACACCGACAT
CGTCGTCTGGGACACCGTCGCCGAGTCGGGGCTCTACAGGCTCAGGGGCC
ACCGGGACGGCGTCACGGACGTGGCCTTTTTGGAAGGGGGGGACGGCGGG
TTAGGGTTCGCTGGGGGAGGGGCGGGGACGGGGTCGGGGGGAGGCACGAG
GCTGCGCAACGGGCTGGCGTCTTGCAGCAAGGACACGCTGGTGAAGCTGT
GGGACCTGGACACGCAGAGCTGCGTGCAGACGGTGGTGGGCCATCGAGGA
GAGGTG
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