mRNA_M-pyrifera_M_contig10027.59.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: D7FQ44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ44_ECTSI) HSP 1 Score: 182 bits (462), Expect = 1.570e-57 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEGDDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSYAE 278 VPGIAARG EILA+GEGDD VTNT+QLIGKFL+LRGPDK DHEVDSVEHCDKFWYWLQ+KGINSNRSGIVNAIAEKVNTWIPGIYDADSY + Sbjct: 33 VPGIAARGAEILADGEGDDKVTNTYQLIGKFLALRGPDKTDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYDADSYTD 124
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: K0QZN8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZN8_THAOC) HSP 1 Score: 133 bits (334), Expect = 5.360e-38 Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEGDDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSY 272 VPGI + LAEGE D+C+TNT+QLIGKFL L+GPD DD++V+S+EHC+KFWYWLQ K I+++RS IV AIA KVN +PG+YDAD Y Sbjct: 33 VPGIGPAAAKKLAEGEHDECITNTYQLIGKFLMLKGPDTDDNKVESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPGVYDADLY 122
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: A0A835Z4N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N7_9STRA) HSP 1 Score: 127 bits (320), Expect = 6.400e-36 Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEGDDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSY 272 VPGI + LA GEG + V NT+QLIGKFLSL+G D + ++EHCD+FWYWL+ GI+S RSGIVNAIAEK NTWIPGIYD D Y Sbjct: 34 VPGIGPAAVKKLAAGEGSNKVANTYQLIGKFLSLKGGDDSGKTIQTIEHCDRFWYWLKEMGISSYRSGIVNAIAEKCNTWIPGIYDEDQY 123
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: A0A7S2R0A3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A3_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.030e-35 Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEGD-DCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSYAE 278 VPGI K LA G+ + D +TNT QLIGKFL L+GPD+DD ++D +EH +KFWYWL+ KGI S+RS IV AI EK+NT IPGIYDA YAE Sbjct: 34 VPGIGPAAKRALAGGDDESDRITNTFQLIGKFLMLKGPDEDDMKIDCMEHMEKFWYWLKQKGIKSHRSAIVKAIGEKINTMIPGIYDASIYAE 126
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: A0A7S2V4V0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V0_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.770e-34 Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEGDDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSYAE 278 VPGI LA + D+ +TN+ QLIGKFL ++GPD ++ EVD V HC+KFWY+L+SKG+NS+RSGIV+AIAEK+NT IPGIYD+D + + Sbjct: 32 VPGIGKAAAAALASADDDEPITNSFQLIGKFLLMKGPDTEEGEVDCVMHCNKFWYYLKSKGVNSHRSGIVHAIAEKINTMIPGIYDSDVFED 123
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: B8CF00_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CF00_THAPS) HSP 1 Score: 122 bits (306), Expect = 6.020e-34 Identity = 53/92 (57.61%), Postives = 71/92 (77.17%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEGDDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSYAE 278 VPGI + LA EG++ +TNT+QLIGKFL L+GPD D ++V+S EHC+KFWYWLQ+ GI+++RS IV AIA+KVN +PG+YD D Y + Sbjct: 16 VPGIGPAAAKKLANVEGEEGITNTYQLIGKFLMLKGPDTDTNKVESFEHCEKFWYWLQAMGISAHRSAIVKAIAQKVNGLLPGVYDPDLYED 107
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: A0A6U3Z2B1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z2B1_9STRA) HSP 1 Score: 120 bits (300), Expect = 8.880e-33 Identity = 59/96 (61.46%), Postives = 76/96 (79.17%), Query Frame = 3 Query: 3 VPGIA-ARGKEILAEGEGD---DCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSYAE 278 VPGI A K++ G+G+ D VTNT+QLIGKFL L+GPD+D ++V+SVEH +KFW++L+ KGI+S+RSGIV AIAEKVNT +PGIYDA Y E Sbjct: 32 VPGIGPAAAKKLGQIGDGETEFDRVTNTYQLIGKFLMLKGPDEDGNKVESVEHMEKFWWYLKQKGISSHRSGIVRAIAEKVNTMLPGIYDASEYEE 127
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: A0A7S2MQ62_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQ62_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.220e-32 Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 3 VPGI--AARGK--EILAEGEGDDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSYAE 278 VPGI AA K EI E + D +TNT+QLIGKFL L+GPD+D H+V+S+EH +KFW++L+ KGI+S+RSGIV AIAEKVNT IPGIYDA Y E Sbjct: 41 VPGIGPAAARKLGEIGDEEKDSDRITNTYQLIGKFLMLKGPDEDGHKVESMEHMEKFWWFLKEKGISSHRSGIVRAIAEKVNTMIPGIYDASEYDE 136
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: A0A7S1ZJR7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJR7_TRICV) HSP 1 Score: 119 bits (298), Expect = 2.930e-32 Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEGDDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSY 272 VPGI + LAEG+ DD VTNT QLIGKF+ L+GPD D+H+V EH KFW+WL K I S+RS IV AIAEK+N +PGIYDAD+Y Sbjct: 54 VPGIGPAAAKRLAEGDDDDRVTNTWQLIGKFMMLKGPDDDEHKVGPGEHMQKFWHWLAEKEIKSHRSAIVKAIAEKMNQMMPGIYDADAY 143
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Match: A0A7S2UIU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIU1_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.290e-30 Identity = 52/93 (55.91%), Postives = 71/93 (76.34%), Query Frame = 3 Query: 3 VPGIAARGKEILAEGEG-DDCVTNTHQLIGKFLSLRGPDKDDHEVDSVEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGIYDADSYAE 278 VPGI + E LA + DD +TNT+QLIGKFL L+GPD D+++V S++H +KFWY+L+ +GI S+RS IV AIAEK+N +IPGIY+ D Y + Sbjct: 33 VPGIGPKAAEKLAASDDTDDRITNTYQLIGKFLMLKGPDDDENKVASMQHMEKFWYYLKERGIASHRSAIVKAIAEKMNMFIPGIYERDCYGD 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10027.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10027.59.1 >prot_M-pyrifera_M_contig10027.59.1 ID=prot_M-pyrifera_M_contig10027.59.1|Name=mRNA_M-pyrifera_M_contig10027.59.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp RCPASRLEGRRSWQRERETTASPTHTSSSESSCLSAAPTRTITRWTPWSTback to top mRNA from alignment at M-pyrifera_M_contig10027:575..3329+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10027.59.1 ID=mRNA_M-pyrifera_M_contig10027.59.1|Name=mRNA_M-pyrifera_M_contig10027.59.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2755bp|location=Sequence derived from alignment at M-pyrifera_M_contig10027:575..3329+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10027:575..3329+ >mRNA_M-pyrifera_M_contig10027.59.1 ID=mRNA_M-pyrifera_M_contig10027.59.1|Name=mRNA_M-pyrifera_M_contig10027.59.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig10027:575..3329+ (Macrocystis pyrifera P11B4 male)back to top |