mRNA_M-pyrifera_M_contig13248.5893.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI) HSP 1 Score: 182 bits (463), Expect = 7.520e-55 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1
Query: 1 VSDPSTYSKKARLQTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPMR 291
VSDPSTYSK+ARL+TMCTAMGSQKWLTLHGHD PEDAVAKLK DGYQVVASDLSPSAVPI +IDWSV TAVVLGNEERGISDSMR+MADATFVIPMR
Sbjct: 185 VSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMR 281
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A836C8H0_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H0_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.110e-28 Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 1 VSDPSTYSKKARLQTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDWSVK-TAVVLGNEERGISDSMRNMADATFVIPMR 291
++DP Y KK RL TM +AMGSQKWL+LHGHDS D LK GY+++ S L P AVP+ IDWS + AV GNE+ G+S+ + D TF IPMR
Sbjct: 79 IADPELYIKKGRLLTMSSAMGSQKWLSLHGHDSAADCARALKARGYRIIGSSLGPGAVPMDAIDWSARRVAVAFGNEKTGLSEGLLAQCDQTFYIPMR 176
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A7S2KIJ5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KIJ5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.500e-23 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 7 DPSTYSKKARL---QTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPM 288
D S Y K L Q M +AMGS W+TL H S EDAV +LK GY++ ASDL+PS+ + ++DW VV+GNE+RGIS MR +AD TF +PM
Sbjct: 35 DSSKYDKPMALIQKQGMRSAMGSAHWITLTNHLSTEDAVKQLKGQGYRIFASDLNPSSKDVRELDWDWPICVVMGNEDRGISQEMRELADETFTLPM 131
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV) HSP 1 Score: 101 bits (251), Expect = 2.830e-23 Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1 VSDPSTYSKKARLQT---MCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDWSV-KTAVVLGNEERGISDSMRNMADATFVIPM 288
V D Y K +Q M TAMGS KWL+L H S E+AV +K +GY++ ASDL+P++ + ++DW V VV+GNEERGISD MR MAD TF +PM
Sbjct: 233 VVDSGMYKGKMAVQQKRGMRTAMGSAKWLSLRNHPSTEEAVRAIKAEGYKIYASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPM 332
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.530e-22 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 7 DPSTYSKKARLQTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSP--SAVPIGKIDWSV-KTAVVLGNEERGISDSMRNMADATFVIPM 288
D + Y K RL +AMGSQKWLT+ H S VA LK +GY V+ASDL P S P+ ++ W+ K A+V+GNEERGI++ MR++ D TF IPM
Sbjct: 77 DTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPM 173
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 9.140e-22 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 7 DPSTYSKKARLQTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSP--SAVPIGKIDWSV-KTAVVLGNEERGISDSMRNMADATFVIPM 288
D + Y K RL +AMGSQKWLT+ H S VA LK +GY V+ASDL P S P+ +++W+ K A+V+GNEERGI++ MR++ D TF IPM
Sbjct: 218 DTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPM 314
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A7S0BXI4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXI4_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 5.640e-21 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 1 VSDPSTYSKKARLQT---MCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDWSV-----KTAVVLGNEERGISDSMRNMADATFVIPM 288
V D S Y+ KA L M +AMGS WLT+ H S +A+ KLKE+GY + ASDL+P +V I + W K VV+GNE +GISD MR + D TF IPM
Sbjct: 224 VVDSSQYNGKAMLNAKRGMRSAMGSASWLTIQNHPSTLEAITKLKEEGYTIYASDLTPDSVDIRDLKWDSDDGRQKVCVVMGNEMKGISDEMRGLVDGTFTIPM 327
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A0G4HU07_9ALVE (SpoU_methylase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HU07_9ALVE) HSP 1 Score: 92.4 bits (228), Expect = 8.000e-20 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 19 YSKKARLQTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDWSVKTAVVLGNEERGISDSMRNMADATFVIPMR 291
YS++ M A+GS KWL+L H++ V +LKE+GY+V ASDLS SAV + +D S AVV+G+E +GI+D MR ADATF IPM+
Sbjct: 356 YSRRNLRGAMTAALGSSKWLSLRQHETTMGCVERLKEEGYRVYASDLSESAVCLSDLDISRPFAVVMGSELKGITDEMRQAADATFFIPMK 446
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A8J2SJW7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJW7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.590e-19 Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 7 DPSTYSKKARLQTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDW-SVKTAVVLGNEERGISDSMRNMADATFVIPMR 291
DP T + R + M +AMG+QKWL+L H + V+KLK +G V A+DLSP AV ++DW S K A+V GNEE GISD +R +AD +PMR
Sbjct: 151 DP-TQRMRGRKKRMTSAMGAQKWLSLEAHADAQALVSKLKSEGRIVAATDLSPGAVDFSEVDWASGKHALVFGNEEVGISDELRELADVRVRLPMR 245
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Match: A0A7S1Y6X6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.030e-18 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 52 TAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVASDLSPSAVPIGKIDWSVK----TAVVLGNEERGISDSMRNMADATFVIPM 288
TAMGS +WL+L H + AVAKLK +GY++ ASDL+P++ + +DWS +V+GNE RGIS MR +AD TF +PM
Sbjct: 219 TAMGSAQWLSLTNHPTTASAVAKLKSEGYKLYASDLNPNSKDVRDVDWSADGDRPICIVMGNEGRGISQEMRELADETFTLPM 301 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13248.5893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13248.5893.1 >prot_M-pyrifera_M_contig13248.5893.1 ID=prot_M-pyrifera_M_contig13248.5893.1|Name=mRNA_M-pyrifera_M_contig13248.5893.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp VSDPSTYSKKARLQTMCTAMGSQKWLTLHGHDSPEDAVAKLKEDGYQVVAback to top mRNA from alignment at M-pyrifera_M_contig13248:6800..8114- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13248.5893.1 ID=mRNA_M-pyrifera_M_contig13248.5893.1|Name=mRNA_M-pyrifera_M_contig13248.5893.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1315bp|location=Sequence derived from alignment at M-pyrifera_M_contig13248:6800..8114- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13248:6800..8114- >mRNA_M-pyrifera_M_contig13248.5893.1 ID=mRNA_M-pyrifera_M_contig13248.5893.1|Name=mRNA_M-pyrifera_M_contig13248.5893.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig13248:6800..8114- (Macrocystis pyrifera P11B4 male)back to top |