mRNA_M-pyrifera_M_contig102727.587.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102727.587.1
Unique NamemRNA_M-pyrifera_M_contig102727.587.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A2R5FZJ9_9STRA (Arylsulfatase B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZJ9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.180e-28
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSPWNAAP---------GAPRSYDPY----------LQM-LWALDGAVSTIVGALKK-ERMWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAGISAADDARASPS 417
            P+FLF + QA H+P  + P         G+ + Y+ Y          LQ  ++A D  +  +V   +  E +W  TL+++ SDNG         N PLRG KG+ FEGGFRTA FVSGG +PA+ RG+ N+  +HI DWY TFC+LAG+S  DD    P+
Sbjct:  265 PIFLFYALQAPHTPLKSIPSNSRYSNSYGSTKYYNEYQDANVENFDLLQWNVYAADVEIERVVSLFQDDEAVWNNTLVVFISDNGGTSNKAPGNNYPLRGEKGTAFEGGFRTASFVSGGIIPASQRGSFNNKIYHISDWYRTFCNLAGVSGDDDPPMGPA 424          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A7S0II64_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0II64_9EUKA)

HSP 1 Score: 113 bits (283), Expect = 1.150e-26
Identity = 64/147 (43.54%), Postives = 86/147 (58.50%), Query Frame = 1
Query:    4 LFLFVSFQAAHSP----------WNAAPGAPRSYDPYLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAG-ISAADDARAS 411
            LFL+++FQ  H P          +NA+   PR     L  + A+D A+  +  AL+   +W+ TLL++ SDNG    + H+ N PLRG+KGS FEGG R A FV GGFLPA +RGT      H+ DWYATF  LAG +  + DA A+
Sbjct:  198 LFLYLAFQDVHGPTEAPGRFFNGYNASTFPPRLKG--LAQIAAVDEALGNVTTALRTRGLWDNTLLVFSSDNGGP--ADHETNYPLRGSKGSDFEGGVRVAAFVGGGFLPAKMRGTTVTGMLHLCDWYATFARLAGALDPSSDAAAA 340          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A7S0IUJ1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IUJ1_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 2.010e-26
Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 1
Query:   82 YLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGA-VQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAGISAAD 396
            YL ML  LD  + TI  A+K + MWERTL+++ +DNG  V       N PL+G KG  ++GGFRTA  V+GGFLPA VR T +++  H+ DWY TF HLAG +A+D
Sbjct:   22 YLAMLKVLDKQIGTIFNAVKSKGMWERTLVVFAADNGGGVGIGVGGNNYPLKGGKGGDWDGGFRTAALVTGGFLPANVRNTVSNVVLHLCDWYVTFAHLAGANASD 127          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A7S4SNS5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SNS5_9DINO)

HSP 1 Score: 112 bits (280), Expect = 2.840e-26
Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSPWNAAPGAPRSYDP--YLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLA 378
            PLFL++ FQA H+P++  P    +  P     ML   D  V  +V ALK++ M+E TL++Y SDNG V       N PLRG K + ++G  R A FVSGG++P AVRGT ND  FH+VDWY TF  LA
Sbjct:  193 PLFLYLPFQAVHTPYDLPPDRTGAECPSNIACMLQDADRWVGELVLALKEKGMYENTLIVYSSDNGGVTDGN---NYPLRGEKHTNWQGAMRVAAFVSGGYVPKAVRGTTNDGVFHVVDWYPTFAGLA 317          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A813IWK6_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IWK6_POLGL)

HSP 1 Score: 110 bits (276), Expect = 1.570e-25
Identity = 65/152 (42.76%), Postives = 83/152 (54.61%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSPWN-------------AAPG----APRSYDPYLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGA-VQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAGISAADDA 402
            PLFLF +F   H+P               AA G    + R+   Y  M   +D A+  +V ALK + MWE TL+++ SDNG  V       N PL+G K S +EGG RT  F+SGGF+P A+RGTK      I DWY TFC LAG+ + DDA
Sbjct:  233 PLFLFYAFHLVHTPLQVPKEYLRKLDQMVAAAGGQNISSRNRRLYAAMNLYMDEAIGEVVKALKAKSMWEDTLVVFTSDNGGPVYVPGSANNYPLKGGKYSDWEGGVRTNAFMSGGFIPQALRGTKFSGVVSIADWYGTFCELAGVESTDDA 384          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A9V8C9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V8C9_MONBE)

HSP 1 Score: 105 bits (262), Expect = 4.030e-25
Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSPWNAAPGAPRSYDPYLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAGISAADDARASPSPLRL 429
            PLF+++++QA H+P++  P     Y                      ++ MW+ TL++Y SDNG V+     +N PLRG K S ++GG   A FVSGG +PA +RG+++ +  HI DWY TF  LAG   ADD   +P P+ L
Sbjct:   47 PLFMYLAWQAVHTPYDPVPDWDDRY-----------------CYGYSEQGMWDNTLIVYSSDNGGVEDG---INYPLRGEKHSNWQGGMHVASFVSGGLVPANLRGSESFVNVHIADWYPTFAKLAGQDPADDPPVAPLPVDL 169          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A0M0J3J9_9EUKA (Arylsulfatase b-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J3J9_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 5.880e-25
Identity = 63/148 (42.57%), Postives = 86/148 (58.11%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSPWNAAPGAPRSYD----PYLQM--LW----ALDGAVSTIVGALK-KERMWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAGISAADDARAS 411
            PLFL+++FQ  H P          YD    P+L +  +W    ALD ++  IVGALK +  MWE ++L++ +DNG    +    N PLRG K S FEGG R+A FVSGG+LPAA+RG+  D    + DWY T C LA +   D+  A+
Sbjct:  736 PLFLYLAFQLVHGPIQTPKRFVNLYDAATHPFLGLRKVWGFVTALDESIGRIVGALKARPSMWENSVLIFSADNGGPLETM--TNYPLRGGKFSDFEGGIRSAAFVSGGYLPAAMRGSTLDGYAMLADWYVTICGLASVDPTDERAAA 881          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A812LRN2_9DINO (Multifunctional fusion protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812LRN2_9DINO)

HSP 1 Score: 103 bits (258), Expect = 4.730e-23
Identity = 62/150 (41.33%), Postives = 80/150 (53.33%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSP------W--------NAAPGAP---RSYDPYLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGA-VQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAGISAAD 396
            PLFLF +F   H P      W         AA G P   ++   Y  M   +D A+   V ALKK+ M++ TL+++ SDNG  +       N PLRG K ++FEGGFRT  FVSGGF+P + RGTK +    I DWY T   LAG+   D
Sbjct:  744 PLFLFYAFHLLHLPLQVPQMWLRRIDDLVKAAGGNPIDSQNRRLYAAMTLYMDAAIGEAVEALKKKNMYDNTLIIFVSDNGGPIYEPGGASNHPLRGGKETLFEGGFRTNAFVSGGFVPESRRGTKFEGVISIADWYGTLAELAGVDIED 893          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: UPI0003F0F030 (arylsulfatase I n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0F030)

HSP 1 Score: 101 bits (252), Expect = 8.970e-23
Identity = 55/137 (40.15%), Postives = 76/137 (55.47%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSP----------WNAAPGAPRSYDPYLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAG 381
            PLFL +SFQA H P          +N   G    +  Y  ML ++D AV  +  AL++  MW+ +++++ +DNGA  A     N PLRGAK ++FEGG R  GFV+   L   VRG   +   H+ DW+ TF HLAG
Sbjct:   89 PLFLTLSFQAVHMPLQVPKQYSDIYNGVFGKNEDWKIYAGMLTSMDEAVGNVTRALRESPMWDNSIIIFSTDNGA-DAKFIGSNWPLRGAKATLFEGGVRGVGFVNSPLLHPEVRGGMTNGLIHMSDWFPTFMHLAG 224          
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Match: A0A1X7VWQ2_AMPQE (Sulfatase domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VWQ2_AMPQE)

HSP 1 Score: 100 bits (250), Expect = 1.900e-22
Identity = 53/141 (37.59%), Postives = 69/141 (48.94%), Query Frame = 1
Query:    1 PLFLFVSFQAAHSPWNAAPGAPRSYD---------PYLQMLWALDGAVSTIVGALKKERMWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFLPAAVRGTKNDITFHIVDWYATFCHLAGISAAD 396
            PLF+++     H+P  A       Y           Y  M+   D     +V  LKK+ MW+ T+++  +DNG         N PL+G KGS FEGG R   FV+GG LP + RG   D   HI DWY TFC LAG+   D
Sbjct:  102 PLFIYLPLHNVHAPLQAPDEWLNIYSVNSTCENRRTYQAMVSVADNVTGYLVQLLKKKGMWDNTIIIISADNGGAACG--GSNYPLKGCKGSFFEGGVRALAFVNGGLLPESRRGESTDGFIHIADWYTTFCKLAGVDPDD 240          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102727.587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5FZJ9_9STRA4.180e-2840.63Arylsulfatase B n=1 Tax=Hondaea fermentalgiana Tax... [more]
A0A7S0II64_9EUKA1.150e-2643.54Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0IUJ1_9EUKA2.010e-2650.94Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S4SNS5_9DINO2.840e-2647.66Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A813IWK6_POLGL1.570e-2542.76Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A9V8C9_MONBE4.030e-2537.76Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A0M0J3J9_9EUKA5.880e-2542.57Arylsulfatase b-like protein n=1 Tax=Chrysochromul... [more]
A0A812LRN2_9DINO4.730e-2341.33Multifunctional fusion protein n=2 Tax=Symbiodiniu... [more]
UPI0003F0F0308.970e-2340.15arylsulfatase I n=1 Tax=Saccoglossus kowalevskii T... [more]
A0A1X7VWQ2_AMPQE1.900e-2237.59Sulfatase domain-containing protein n=3 Tax=Amphim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102727contigM-pyrifera_M_contig102727:227..655 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.4
Seed ortholog evalue1.4e-21
Seed eggNOG ortholog44056.XP_009032282.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sulfuric ester hydrolase activity
EggNOG OGsCOG3119@1,KOG3867@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size429
Cds size429
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815531.3662589-CDS-M-pyrifera_M_contig102727:226..6551622815531.3662589-CDS-M-pyrifera_M_contig102727:226..655Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102727 227..655 +
1692277451.673097-CDS-M-pyrifera_M_contig102727:226..6551692277451.673097-CDS-M-pyrifera_M_contig102727:226..655Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102727 227..655 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102727.587.1prot_M-pyrifera_M_contig102727.587.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102727 227..655 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102727.587.1

>prot_M-pyrifera_M_contig102727.587.1 ID=prot_M-pyrifera_M_contig102727.587.1|Name=mRNA_M-pyrifera_M_contig102727.587.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
PLFLFVSFQAAHSPWNAAPGAPRSYDPYLQMLWALDGAVSTIVGALKKER
MWERTLLLYQSDNGAVQASKHDVNTPLRGAKGSMFEGGFRTAGFVSGGFL
PAAVRGTKNDITFHIVDWYATFCHLAGISAADDARASPSPLRL
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mRNA from alignment at M-pyrifera_M_contig102727:227..655+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102727.587.1 ID=mRNA_M-pyrifera_M_contig102727.587.1|Name=mRNA_M-pyrifera_M_contig102727.587.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig102727:227..655+ (Macrocystis pyrifera P11B4 male)
CCTCTTTTCCTGTTTGTGTCGTTCCAAGCCGCGCATTCTCCTTGGAATGC TGCCCCAGGCGCTCCTCGGTCCTACGACCCGTACTTGCAGATGTTGTGGG CGTTGGATGGCGCGGTTTCTACGATTGTGGGAGCCTTGAAGAAGGAGCGC ATGTGGGAGCGCACGCTGCTGCTCTACCAGTCTGACAATGGCGCGGTGCA GGCTTCAAAGCACGACGTGAACACGCCTCTTCGCGGCGCCAAAGGGTCCA TGTTTGAGGGCGGGTTTCGAACGGCTGGCTTCGTCTCTGGAGGGTTCTTG CCCGCTGCAGTGCGAGGGACCAAGAACGACATTACGTTCCACATCGTCGA CTGGTACGCCACGTTCTGCCACCTCGCCGGCATCTCTGCCGCTGACGACG CACGTGCGTCACCTTCTCCACTCCGCCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102727:227..655+

>mRNA_M-pyrifera_M_contig102727.587.1 ID=mRNA_M-pyrifera_M_contig102727.587.1|Name=mRNA_M-pyrifera_M_contig102727.587.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig102727:227..655+ (Macrocystis pyrifera P11B4 male)
CCTCTTTTCCTGTTTGTGTCGTTCCAAGCCGCGCATTCTCCTTGGAATGC
TGCCCCAGGCGCTCCTCGGTCCTACGACCCGTACTTGCAGATGTTGTGGG
CGTTGGATGGCGCGGTTTCTACGATTGTGGGAGCCTTGAAGAAGGAGCGC
ATGTGGGAGCGCACGCTGCTGCTCTACCAGTCTGACAATGGCGCGGTGCA
GGCTTCAAAGCACGACGTGAACACGCCTCTTCGCGGCGCCAAAGGGTCCA
TGTTTGAGGGCGGGTTTCGAACGGCTGGCTTCGTCTCTGGAGGGTTCTTG
CCCGCTGCAGTGCGAGGGACCAAGAACGACATTACGTTCCACATCGTCGA
CTGGTACGCCACGTTCTGCCACCTCGCCGGCATCTCTGCCGCTGACGACG
CACGTGCGTCACCTTCTCCACTCCGCCTCCCTCTTTTCCTGTTTGTGTCG
TTCCAAGCCGCGCATTCTCCTTGGAATGCTGCCCCAGGCGCTCCTCGGTC
CTACGACCCGTACTTGCAGATGTTGTGGGCGTTGGATGGCGCGGTTTCTA
CGATTGTGGGAGCCTTGAAGAAGGAGCGCATGTGGGAGCGCACGCTGCTG
CTCTACCAGTCTGACAATGGCGCGGTGCAGGCTTCAAAGCACGACGTGAA
CACGCCTCTTCGCGGCGCCAAAGGGTCCATGTTTGAGGGCGGGTTTCGAA
CGGCTGGCTTCGTCTCTGGAGGGTTCTTGCCCGCTGCAGTGCGAGGGACC
AAGAACGACATTACGTTCCACATCGTCGACTGGTACGCCACGTTCTGCCA
CCTCGCCGGCATCTCTGCCGCTGACGACGCACGTGCGTCACCTTCTCCAC
TCCGCCTC
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