prot_M-pyrifera_M_contig100236.58.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100236.58.1
Unique Nameprot_M-pyrifera_M_contig100236.58.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length193
Homology
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BLAST of mRNA_M-pyrifera_M_contig100236.58.1 vs. uniprot
Match: A0A350UZ90_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A350UZ90_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 5.700e-5
Identity = 26/92 (28.26%), Postives = 48/92 (52.17%), Query Frame = 0 
Query:    1 VHVFWSAPEQVQGFEVFHARSTDGGTTFGPAVAVPGARFDQLYDVDVQGAVLAMAWAVIDPQTQTIQVERTSSSDGGQTWAPVTKLPQATGV 92
            VH+ W+     Q +++++ RSTDGG ++ P VA+          +   G+V+ + WA  D  + T ++   +S+ GG +W   T+L  A  +
Sbjct:  108 VHIIWTQSPSSQHYDIYYRRSTDGGGSWLPPVAIYTGGKSLYQSITASGSVVIVTWAE-DLPSNTSEIYVRNSTTGGNSWGSATRLTNANSI 198
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100236.58.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A350UZ90_9BACT5.700e-528.26Por_Secre_tail domain-containing protein n=1 Tax=B... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.120.10.10coord: 43..193
e-value: 1.2E-8
score: 36.4
IPR036278Sialidase superfamilySUPERFAMILY50939Sialidasescoord: 4..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100236contigM-pyrifera_M_contig100236:2..580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100236.58.1mRNA_M-pyrifera_M_contig100236.58.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100236 2..580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100236.58.1 ID=prot_M-pyrifera_M_contig100236.58.1|Name=mRNA_M-pyrifera_M_contig100236.58.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
VHVFWSAPEQVQGFEVFHARSTDGGTTFGPAVAVPGARFDQLYDVDVQGA
VLAMAWAVIDPQTQTIQVERTSSSDGGQTWAPVTKLPQATGVAFDTALSP
EVEIRPQTAEITLAALALQNGAQKVVAQHSPDAGVTWQPTQLIELGSAVD
LDLEFAGNGRLRGVLTWQTAPGADLRTALTLDGGQSFGPAQAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036278Sialidase_sf