mRNA_M-pyrifera_M_contig13069.5836.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13069.5836.1 vs. uniprot
Match: D8LL20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL20_ECTSI) HSP 1 Score: 390 bits (1002), Expect = 6.180e-125 Identity = 239/387 (61.76%), Postives = 284/387 (73.39%), Query Frame = 1
Query: 1 RHPILQDDVVAGRGGGRGEDAGVACGLVVLAGLEGSRESGEAEVAAPPP-VVLAIAYRAGCVDIALVPGGVSPRWSHRSRARVSFKSAE--GQAGGVRGGVLESLDLADRSSDKGTKKSQGLSLSACAGA-WTLLAATPRRVTSVTVTWAGRIEKTAQRARERAAQGRPGE-----TGRLDGDLRALLRERPDSTVNEVLFVASHAAMGRIVGVVPVASPVVGNLAMARLAGGAVEMVNLGVVMLQATEVASAAKRARAQETPGRGDMLPPFEAALQKATDELEERRADTLLPGSSAGQLLMSELDKTSVRVVEKEASKFVKGGIVVLEKLHLKTSTRLQTLSEIHEHQSGLVLRLAKDVRHLRDGREEVNETLDDIRDMADGQRVR 1134
RH +LQD ++AGR GE+AG ACGL VL G+ G VVLA+AYR G VDIALVP GVSPRWS R+ RVS +A G G G VLESLDLA+R DK ++ QGLSLSA A WTLLAATP RV SVTVTWAGRI++ A+RARERAAQ RPG +GRLDGDLRA+LRERPDS VNEVLFV + GRIVGVVPV SP+VG+LAMARLAGG VEMVN+GV+ LQATEVASAAKRA AQ+TPGRGDMLP FEAALQKA ++ E +A+ L +AG L MS+LD+ VRVVE++A + V GG+VVLEKLHLK S RL+TL+E++EHQSGLV A+++ LR+G+E+ E ++I MAD QR R
Sbjct: 398 RHLVLQDRILAGR---TGENAGAACGLAVLQGVGGXXXXXXXXXXXXXXXVVLAVAYREGWVDIALVPAGVSPRWSERAGQRVSCAAAAAGGSGGETSGAVLESLDLAERVEDKTARRRQGLSLSAGGSASWTLLAATPCRVASVTVTWAGRIQRAAERARERAAQDRPGTNSSSGSGRLDGDLRAVLRERPDSQVNEVLFVP-RCSSGRIVGVVPVDSPIVGHLAMARLAGGHVEMVNVGVMTLQATEVASAAKRAEAQDTPGRGDMLPRFEAALQKAKKDIGELQANRPL-ALAAGHLKMSQLDQKGVRVVEEQADRLVDGGVVVLEKLHLKMSRRLETLTEVYEHQSGLVKGTAREIASLRNGQEDKTEWAEEINGMADEQRAR 779 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13069.5836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13069.5836.1 >prot_M-pyrifera_M_contig13069.5836.1 ID=prot_M-pyrifera_M_contig13069.5836.1|Name=mRNA_M-pyrifera_M_contig13069.5836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=378bp RHPILQDDVVAGRGGGRGEDAGVACGLVVLAGLEGSRESGEAEVAAPPPVback to top mRNA from alignment at M-pyrifera_M_contig13069:584..8422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13069.5836.1 ID=mRNA_M-pyrifera_M_contig13069.5836.1|Name=mRNA_M-pyrifera_M_contig13069.5836.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7839bp|location=Sequence derived from alignment at M-pyrifera_M_contig13069:584..8422- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13069:584..8422- >mRNA_M-pyrifera_M_contig13069.5836.1 ID=mRNA_M-pyrifera_M_contig13069.5836.1|Name=mRNA_M-pyrifera_M_contig13069.5836.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2268bp|location=Sequence derived from alignment at M-pyrifera_M_contig13069:584..8422- (Macrocystis pyrifera P11B4 male)back to top |