mRNA_M-pyrifera_M_contig1306.5829.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: D8LJR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR3_ECTSI) HSP 1 Score: 545 bits (1403), Expect = 3.760e-184 Identity = 386/638 (60.50%), Postives = 444/638 (69.59%), Query Frame = 1
Query: 1 MASRIGLIRARGRAHGANLVYGQHQ--LCGLRLLARLSSSS-RADVGRVDSNRMRHEAAGGVVASACRNS--ASPSFL-RNDPLSDKAALFSSNA--KPSRDEEGDEGLEGDEDEAGEDSDYNAMLEG---IGGETKEDRLARLDDGDKYKDFVSLRLEEVEKLFPEGLAGGGQGALERATTRGTSAALLRREAAHALIQSLDGFA--EAGVA---GIEGTGSDKWKVVRKAYSPTGKRGAGRELEGGAEEXXXXXXXXXXXXDGEIGDVQAAAAEXXXXXXXXXXXXXXXXXXXXXXGLXXXXXXXXXXXXXXEE------KKALGGGPIWGEMKALAESKRKPLKGVARMVVKPGQRSYLLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHIQDPKVLARHKGAKTLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHWHYGDNKASRRTLMAGGLEAPHLTATLPLVPSLKATVTGLTFADDDLANVANP--VADKSKDKKSPP-----AWLDTQTGGACLPPPPANGIVVCATSGRYPPLKKLKKNKKWVPFEVVAGRLAKAVSV 1827
MA+R GLIRARG + A LV+ Q Q + G+RLLARLSSSS R+ + ++ A G A R+ AS FL R D S ALFSS +P+ +EG D D S + G G +DRLARLDDGDKY+DF LRL E E +FPEGLAGGGQGALERA GTS ALLRREAA ALI SLD FA + G A GIEGT S+ W+ V +A ++ XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX EE KK LG GP+W EMKALAESKRKPLKGV R+V++PGQRSYLL+GRRGSGKSCVL+ VLHARSTGWIVLFVPD RNLVQKGIYCQPSP E LYDLP+Q S+KRLKTLR AHGDQLK+I I+DP+VL RH+GAKTLLD++D+G+ ++E AGT H+D MRELLATTEAKV+LAIDEYNEL+Q S WHYGDNK LEAPHLTATLPL+P L +T TGL FADD +A +ANP VA++ K++P AW+ +TG ACLPPPPANGIVVCA SGRYPPLK+L+KNKKWVPFE AGRLA+AVS+
Sbjct: 1 MATRFGLIRARGHSCRAQLVHDQLQSSISGVRLLARLSSSSSRSTALKGSASGSSSSAPLGFRPPAHRHQYPASSIFLGRRDSGSCGKALFSSTTATRPAP----EEGAAQDSDPGHSSSSSSGSKPGRKTFDGGNNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDAFAPEDGGAAPPFGIEGTSSENWRKVSEARQYGSQQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEQEEGKGGEDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQRSYLLTGRRGSGKSCVLDHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPVQ-----SMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNK----------LEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEVVAER---KRTPAEAGGVAWMSPETGAACLPPPPANGIVVCAVSGRYPPLKRLRKNKKWVPFEATAGRLAQAVSI 616
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A6H5KXH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH7_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 1.450e-136 Identity = 331/632 (52.37%), Postives = 390/632 (61.71%), Query Frame = 1
Query: 1 MASRIGLIRARGRAHGANLVYG--QHQLCGLRLLARLSSSSRADVGRVDSNRMRHEAAGGVVASACRNS--ASPSFL-RNDPLSDKAALFSSNA--KPSRDEEGDEGLEGDEDEAGEDSDYNAMLEG---IGGETKEDRLARLDDGDKYKDFVSLRLEEVEKLFPEGLAGGGQGALERATTRGTSAALLRREAAHALIQSLDGFA-EAGVA----GIEGTGSDKWKVV---RKAYSPTGKRGAGRELEGGAEEXXXXXXXXXXXXDGEIGDVQAAAAEXXXXXXXXXXXXXXXXXXXXXXGLXXXXXXXXXXXXXXEEKKALGGGPIWGEMKALAESKRKPLKGVARMVVKPGQRSYLLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHIQDPKVLARHKGAKTLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHWHYGDNKASRRTLMAGGLEAPHLTATLPLVPSLKATVTGLTFADDDLANVANPVADKSKDKKSPP-----AWLDTQTGGACLPPPPANGIVVCATSGRYPPLKKLKKNKKWVPFEVVAGRLAKAVSV 1827
MA+R+GLIRARG + A LV+G Q + G+RLLARLSSSSR + + A R+ AS FL R+D S ALFSS +P+ +EG D D G G+ +DRLARLDDGDKY+DF LRL E E +FPEGLAGG QGALERA GTS ALLRREAA ALI SLD FA E G A GIEGT S+ W+ R+ S XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXX E+KK LG GP+W EMKALAESKRKPLKGV R+V++PGQ G G AR+ I+ P + P+P L P S+KRLKTLR AHGDQLK+I I+DP+VL RH+GAKTLLD++D+G+ ++E AGT H+D MRELLATTEAKV+LAIDEYNEL+Q SHW+YGD+KAS LEAPHLTATLPL+P L +T TGL FADD +A +ANP ++ K++P AW+ +TG ACLPPPPANGIVVCA SGRYPP+K+L+KNKKWVPFE AGRLA+AVSV
Sbjct: 1 MATRVGLIRARGHSCRAQLVHGPLQSSISGVRLLARLSSSSRNTAVKGSPSGRSSSAPLAFRPPDRRHQYPASSIFLGRSDSGSGGKALFSSTTATRPAH----EEGAAQDSDPGRSSXXXXXXKPGRKTFDGKDNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGRQGALERAMAGGTSTALLRREAADALIHSLDAFAPEHGGAVPPFGIEGTSSENWRKACEARQYGSQQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPEQEEGRGREDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQ---------GGGAP---------ARAASSIM---PSST----------PAPAHPTLRSPP---PVLQSMKRLKTLREAHGDQLKNISIKDPEVLGRHEGAKTLLDVMDMGLADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSHWYYGDSKASAAV---SRLEAPHLTATLPLLPPLVSTGTGLAFADDSVAALANPEV-VAETKRTPAEAGGGAWMSPETGAACLPPPPANGIVVCAVSGRYPPVKRLRKNKKWVPFEATAGRLAQAVSV 590
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A836C8P4_9STRA (Mitochondrial ribosomal death-associated protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P4_9STRA) HSP 1 Score: 140 bits (353), Expect = 9.040e-32 Identity = 102/298 (34.23%), Postives = 143/298 (47.99%), Query Frame = 1
Query: 1006 QRSYLLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHIQDPKVLARHK---GAKTLLDLIDL---------GVDNE------ELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHWHYGDNKASRRTL------MAGGLEAPHLTATLPLVPSLKATVTG--LTFADDDLANVANPVADKSKDKKSPPAWLDTQTGGACLPPP--PANGIVVCATSGRYPPLKKLK-KNKKWVPFEVVAGRLA 1812
QR++LL G RG+GKS LN V +AR+ GW+VLFVP+AR L++ GIYCQPS +YD P+ A + + L +AHG QL+++ +QD AR+ G+ L + D+ GVD+E A D + ELL+T VLLA+DEY+EL+QPS WHY + + L L +P K TV + F + PP GG C P P P G V+ A + YPP++K+K K+ +W F+ G A
Sbjct: 241 QRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQ-----RMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPF-------------------RPPP------DGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSA 508
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A1V9Y7H5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7H5_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 8.870e-14 Identity = 57/170 (33.53%), Postives = 85/170 (50.00%), Query Frame = 1
Query: 1009 RSYLLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHIQ----DPKVLAR------------HKGAKTLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHWHY 1470
++++L G RG+GK+ L QIV AR GWIVLF P R Y S E +D+ + A + +K L HG+QL ++ IQ D K R +K TLLD+ + G+ ++ L+ + D EL T+ VL+AIDEYN L++ + + Y
Sbjct: 15 KAFVLDGERGTGKTVALLQIVQFARENGWIVLFAPQVRAWCYDAPYVTKSAHIEGKFDIDVVA-----MDIIKQLIEFHGEQLAELLIQGDYADNKYYPRSFEKKPKSSSEYNKEDLTLLDMAENGLKDDLLSCSALVDLRAELAKVTKYPVLIAIDEYNTLFEKTVFGY 179
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A7S2DHI4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHI4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.990e-13 Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 1
Query: 1027 GRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHIQDPKVLARHKGAKTLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHWHYGDNKASRRTLM 1503
G RG+GK+ L V AR GWI L +P R LV G++ PS + +D P A + LK +AH L +++Q ++++ TL D++ +G+ +E+ A EL+A TE VL+AIDEYN L++ + + + + L+
Sbjct: 125 GERGTGKTATLLHTVHWARREGWITLHIPSGRELVYGGLWVNPSSEKDGSFDQPQVAH-----QILKDFGAAHSHDLTALNLQH--AASKNRYGSTLADVLQIGIADEDEATAALVVLKGELVAQTERPVLIAIDEYNALFEATPYSFAQKQLESEQLV 276
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A7I8K7G9_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K7G9_SPIIN) HSP 1 Score: 75.5 bits (184), Expect = 9.950e-11 Identity = 56/169 (33.14%), Postives = 82/169 (48.52%), Query Frame = 1
Query: 1000 PGQRSYLLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHIQDPKVLARHKGAK--------------TLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHW 1464
P ++ +L G GKS +L +V ARS GW+V +VP+AR + G + + T NL+D P+QA A LK +H +L I I DP L G + TLLDL+ +G++ + A V +EL + VLLAID+YN + S +
Sbjct: 189 PVRKQVVLDGLVSCGKSILLAMLVHWARSEGWLVFYVPNARKWTRGGFFYRNPNT--NLWDTPVQA--AQILKDFLKFNESHLQKL-PIQIFDPIPLGEGAGIRMRKDADSMAMPEDSTLLDLVRIGIEEQHAAVGVVVRLRKELSFVKDIPVLLAIDQYNSWFTFSEY 352
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A1Z5JXK7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXK7_FISSO) HSP 1 Score: 72.8 bits (177), Expect = 9.700e-10 Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 1
Query: 1012 SYLLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHIQDPK-VLARHKGAKTLLDLIDLGVDNEELA---------GTVHFDT------MRELLATTEAK-VLLAIDEYNELYQPSHWHYGD 1476
S L+SG +G GK+ + IV ARS+G++VL++P+ L Q G Y +P+P + ++D+PI + A LKT +S I + PK V+A H L L D+ ++A G ++F M L+ + K LLA+DE+N Y PSH+ + D
Sbjct: 292 SILVSGCQGVGKTAAVAAIVASARSSGYLVLYLPNGDQLHQNGFYVEPNPQKKGIFDIPIMSQRACD-DFLKTHKSDM------IGLNVPKGVIAEHLAKDQLQRLFRDAKDDSQIALNALLDFGRGRINFAAPCLSAAMDYLMYHQDEKPFLLAMDEFNCFYMPSHYFHAD 456
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A067CQ98_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ98_SAPPC) HSP 1 Score: 70.1 bits (170), Expect = 4.150e-9 Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 1
Query: 1048 SCV-LNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQASFALSLKRLKTLRSAHGDQLKDIHI--------------QDPKVLARH-KGAKTLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHWHYGDNKASRRTL 1500
+CV L QIV AR GWIVLF P R + Y S + YD+ + A + LK L +HG QL ++ + + PK + + K + TLLD+ + G+ ++ L+ D EL T+ VL+AIDEYN L++ + + Y + + R +
Sbjct: 143 TCVALLQIVNFARENGWIVLFAPHVRAWCYEAPYVTKSAHIQGKYDIDVVA-----MDVLKQLIQSHGHQLAELPLSADYGDKYYPHTFEKKPKSTSEYDKASLTLLDMAENGLKDDLLSCAALVDLRAELAKVTKFPVLIAIDEYNTLFEKTVFGYEGHDVAPRDI 304
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: A0A8J4Q393_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q393_9MYCE) HSP 1 Score: 69.7 bits (169), Expect = 5.390e-9 Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 1
Query: 994 VKPGQRSY--LLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLYDLPIQ-ASFALSLKRLKTLRSAHGDQLKDIHIQDPKVLARHKGA----KTLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHWHYGD 1476
+K + Y +L GR+GSGKS L+Q+V A+ W+VL+VPDA N + G + +P P+ A + + L + ++LK+I+++ V+ + KT+ DLI G+ + A V + +EL A E VL+AID YN ++ S YGD
Sbjct: 134 IKDSESDYYKILDGRKGSGKSVALSQVVFWAQQQDWLVLYVPDAFNFINNGSLTKYTPN-------PLTFAQNEMCFEFLNQFLELNSEKLKNINLKTRFVIEYNNWTSSPDKTIYDLIS-GMKFDS-ATEVFYHFKKELNAVVEYPVLVAIDGYNLFFRASE--YGD 290
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Match: I7J5U2_BABMR (Mitochondrial ribosomal death-associated protein 3 n=1 Tax=Babesia microti (strain RI) TaxID=1133968 RepID=I7J5U2_BABMR) HSP 1 Score: 67.0 bits (162), Expect = 4.800e-8 Identity = 55/206 (26.70%), Postives = 87/206 (42.23%), Query Frame = 1
Query: 1015 YLLSGRRGSGKSCVLNQIVLHARSTGWIVLFVPDARNLVQKGIYCQPSPTFENLY-DLPIQASFALSLKRLKTLRSAHGDQLKDIHIQ---------------------DP---KVLAR-------------------------------HKGAKTLLDLIDLGVDNEELAGTVHFDTMRELLATTEAKVLLAIDEYNELYQPSHW 1464
+LL G+RGSGKS +LN +VL AR GW+V+F PD YC+ + ++ IQ+ FA +L L ++ ++G+ LK I + DP K++A+ H TLLD+ + G N LA ++ +L T +L+AID++NE + S +
Sbjct: 141 FLLDGKRGSGKSSILNHVVLWARQNGWLVIFEPDVSR------YCREIGEIKRSNANIFIQSDFAANL--LARIKESNGELLKKIPLNSKIFGLTSLDGSNVRYARRAFDPLIQKIIAQDLEDFQGDIDLERLRLWHKYRNDFKLPSIKMHLQPNTLLDIAEFGASNPPLANQALYELFEQLKQQTYYPLLIAIDKWNECFPVSEY 338 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1306.5829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1306.5829.1 >prot_M-pyrifera_M_contig1306.5829.1 ID=prot_M-pyrifera_M_contig1306.5829.1|Name=mRNA_M-pyrifera_M_contig1306.5829.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=609bp MASRIGLIRARGRAHGANLVYGQHQLCGLRLLARLSSSSRADVGRVDSNRback to top mRNA from alignment at M-pyrifera_M_contig1306:399..7044- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1306.5829.1 ID=mRNA_M-pyrifera_M_contig1306.5829.1|Name=mRNA_M-pyrifera_M_contig1306.5829.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6646bp|location=Sequence derived from alignment at M-pyrifera_M_contig1306:399..7044- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1306:399..7044- >mRNA_M-pyrifera_M_contig1306.5829.1 ID=mRNA_M-pyrifera_M_contig1306.5829.1|Name=mRNA_M-pyrifera_M_contig1306.5829.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3654bp|location=Sequence derived from alignment at M-pyrifera_M_contig1306:399..7044- (Macrocystis pyrifera P11B4 male)back to top |