prot_M-pyrifera_M_contig1027.582.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig1027.582.1
Unique Name	prot_M-pyrifera_M_contig1027.582.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	244

Homology

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BLAST of mRNA_M-pyrifera_M_contig1027.582.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 3.010e-67
Identity = 136/246 (55.28%), Postives = 177/246 (71.95%), Query Frame = 0

Query:    1 MASTLGILDVLSRLREESERASTALAAQEDTNRGLLQRCSEAESESGRTGAIVESLQHQQMELEEARRVAEFRRQESESRLRRLQKQQARLRAGSAHAY--VSAANHSWMCISWTFRMEATESVRHIEELRARLQEKRKELERVREQARETDEDLATKVAARDKVRTEVGLKLEEVAAACSKAEEMEEDNKAVLEKARRVEEEIEETXXXXXXMQEMAVGLQKKNVILRNELRHLKRSLDGERPVQ 244
            MASTLG+LDVLS+LREESERASTAL AQ++TNR LLQ+C EAE+ESGRT    E+LQ ++++LE+    AE  R+E+E RLRRLQ QQAR +  +A      +AA  S + IS  FR +A + VR I ELRARL++KR ELE   E  RE D +++ K A RD V+ EV  +LE VA +CSK ++++ +NK++L +A+RVE EI+E       MQEMAVGLQ+KN ILR+ELRHLKR L+G  P Q
Sbjct:    1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETESGRTDEAKEALQLRKVQLEQGHEDAETGRREAEGRLRRLQMQQARRKQAAARMRENTTAAGASAVAISKRFRADAFDRVRQIGELRARLRDKRGELESAEEDKRELDVEISNKKATRDTVKAEVTSQLEAVALSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGGNPAQ 246

[Close]

BLAST of mRNA_M-pyrifera_M_contig1027.582.1 vs. uniprot
Match: A0A6H5KAN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN2_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 2.760e-20
Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 0

Query:  144 EQARETDEDLATKVAARDKVRTEVGLKLEEVAAACSKAEEMEEDNKAVLEKARRVEEEIEETXXXXXXMQEMAVGLQKKNVILRNELRHLKRSLDGERPVQ 244
            E+ RE D ++  K A RDKV+ EV  +LE V  +CSK ++++ +NK++L +A+RVE EI+E       MQEMAVGLQ+KN ILR+ELR+LKR L+G+ P Q
Sbjct:   24 EEKRELDVEIGNKKATRDKVKAEVASRLEAVTTSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRYLKRELEGDNPGQ 124

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig1027.582.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig1027.582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1F2_ECTSI	3.010e-67	55.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAN2_9PHAE	2.760e-20	51.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..94
None	No IPR available	COILS	Coil	Coil	coord: 11..45
None	No IPR available	COILS	Coil	Coil	coord: 115..156
None	No IPR available	COILS	Coil	Coil	coord: 174..222

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig1027	contig	M-pyrifera_M_contig1027:5024..14046 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig1027.582.1	mRNA_M-pyrifera_M_contig1027.582.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig1027 5024..14046 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig1027.582.1 ID=prot_M-pyrifera_M_contig1027.582.1|Name=mRNA_M-pyrifera_M_contig1027.582.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
MASTLGILDVLSRLREESERASTALAAQEDTNRGLLQRCSEAESESGRTG
AIVESLQHQQMELEEARRVAEFRRQESESRLRRLQKQQARLRAGSAHAYV
SAANHSWMCISWTFRMEATESVRHIEELRARLQEKRKELERVREQARETD
EDLATKVAARDKVRTEVGLKLEEVAAACSKAEEMEEDNKAVLEKARRVEE
EIEETRETQEEMQEMAVGLQKKNVILRNELRHLKRSLDGERPVQ