mRNA_M-pyrifera_M_contig13010.5821.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: D7FH30_ECTSI (Alcohol dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH30_ECTSI) HSP 1 Score: 210 bits (534), Expect = 1.750e-59 Identity = 121/186 (65.05%), Postives = 140/186 (75.27%), Query Frame = 3
Query: 759 RRKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQS--PGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTEYS 1310
++KTVLFVGSVGGGS +VFPGFR+ADAMSKAAVAY K+FAAR RQ + ++ D + D +A+ A A T+ + GVDFLCLCPGATLTDMFR+STLDKM++ PGELERFLRALPQGRL LPEEVGEAV+W CSSPAA MFHGAVIDASAGLAVRPG+LTEY+
Sbjct: 267 KKKTVLFVGSVGGGSHAVFPGFRSADAMSKAAVAYGAKYFAARSRQ-----LRQQQEAGHDATARADDGSSATAAAGDVRAPAPAATAESDFDHPSGGVDFLCLCPGATLTDMFRASTLDKMEASGPGELERFLRALPQGRLMLPEEVGEAVYWFCSSPAATMFHGAVIDASAGLAVRPGTLTEYT 447
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A6H5K7X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X4_9PHAE) HSP 1 Score: 196 bits (499), Expect = 5.370e-54 Identity = 118/192 (61.46%), Postives = 136/192 (70.83%), Query Frame = 3
Query: 759 RRKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTAS------HARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQS--PGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTEYS 1310
++KTVLFVGSVGGGS +VFPGFR ADAMSKAAVAY K+ AAR RQ + +D +D + D +A + + F SG GVDFLCLCPGATLTDM R+STLD +++ PGELERFLRALPQGRL LPEEVGEAV+W CSSPAA MFHGAVIDASAGLAVRPG+LTEY+
Sbjct: 307 KKKTVLFVGSVGGGSHAVFPGFRYADAMSKAAVAYGAKYMAARSRQ-----LRQQQDAGRDATARADNGSSAGAXXXXXXXXXXXAESDFDHPSG--------GVDFLCLCPGATLTDMLRTSTLDAIEARGPGELERFLRALPQGRLMLPEEVGEAVYWFCSSPAATMFHGAVIDASAGLAVRPGALTEYT 485
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A836CDD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDD1_9STRA) HSP 1 Score: 125 bits (313), Expect = 6.880e-31 Identity = 78/182 (42.86%), Postives = 99/182 (54.40%), Query Frame = 3
Query: 759 RRKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQSPGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTE 1304
RR +LF+GSVGG SQSVFPGFR ADAMSKAAV + K AA H + +DF+C+ PGA TDMF++STLDKM + E + F+ LP+GRL PEE+ EAV+WL ++ A +F+GA +DAS GLAVRPG +TE
Sbjct: 3 RRSALLFIGSVGGASQSVFPGFRHADAMSKAAVGHMVKLLAAE------------------------------HCH--------------------SPIDFVCVSPGAVRTDMFKASTLDKM-TDAERQAFIARLPKGRLIEPEEIAEAVYWLATAQCARIFNGACLDASQGLAVRPGLITE 133
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A7S0G6R5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6R5_9RHOD) HSP 1 Score: 113 bits (283), Expect = 8.030e-25 Identity = 75/181 (41.44%), Postives = 94/181 (51.93%), Query Frame = 3
Query: 762 RKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQSPGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTE 1304
R V+FVGSVGGGS +VFP + AAD MSKAAVAY KH AA DN V + VD C+ PGAT T+MF+ STL+++ P + F+ +P+G L P V E + +L +SPA+ +FHGAVIDAS GLAVRPG TE
Sbjct: 168 RTVVVFVGSVGGGSAAVFPEYHAADLMSKAAVAYLSKHLAA-------DN-------------------------------------------VHSNVDIFCISPGATETEMFQKSTLNQLNDP---DGFIAGMPKGVLISPTHVAENIFYLSTSPASKIFHGAVIDASMGLAVRPGLQTE 295
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A0G4J4J7_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J4J7_PLABS) HSP 1 Score: 108 bits (270), Expect = 5.790e-23 Identity = 73/179 (40.78%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 94 PDSAPLVIVTGGSRGIGKACVESFARRGARVLFTYCSDAEAAKRVEQAFYPAGRVQGRRLDQGDFDNVQAFAAEVDRWRDHREITTLVNNAALGVATVSSYAGLPQQRDDEGSASTNADPAAIEESAATAAXXXXXXXXXXXXARKQAAEDVALMRVNALGPMWVTEALLPMMLGPPRS 630
P + V+VTGGS GIG++ VE+F RVLFTY AEAA R+ + + A V R DQGD +V A +V RW D + + LVNNAALG TV +Y L RD++ +A +A D ALMRVNALGP+WV++AL+P+M GP R+
Sbjct: 5 PGAVKNVVVTGGSSGIGRSIVEAFCGESHRVLFTYLRHAEAAARLVERYPTATAV---RCDQGDLQSVVALHDDVARWLDGQPLDVLVNNAALGSQTVLTYENL---RDNDAREHLDA----------------GSRGAHIQQLLSKACRDEALMRVNALGPLWVSDALIPLMSGPNRA 161
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: R7QEK9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEK9_CHOCR) HSP 1 Score: 110 bits (274), Expect = 1.040e-22 Identity = 68/181 (37.57%), Postives = 93/181 (51.38%), Query Frame = 3
Query: 762 RKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQSPGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTE 1304
R +++F+GSVGGGS SVFP + AAD MSK+A++Y KH AA+ V +D C+ PGAT T+MFR STL K+ +++ F+ ++P+ RL PEE+ +AV WL + +FHGAV+DAS GLAVRPG TE
Sbjct: 306 RSSIVFIGSVGGGSASVFPEYCAADLMSKSALSYLSKHLAAQH--------------------------------------------------VRDSIDVCCVAPGATETEMFRRSTLSKVS---DVDAFVDSMPKRRLIQPEEIADAVFWLATQSPPGIFHGAVLDASMGLAVRPGLQTE 433
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A520NR90_9RHOB (SDR family oxidoreductase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A520NR90_9RHOB) HSP 1 Score: 102 bits (255), Expect = 3.900e-21 Identity = 71/181 (39.23%), Postives = 91/181 (50.28%), Query Frame = 3
Query: 765 KTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQSPGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTEY 1307
K ++ + SVGGG + FPGFR +D MSK+AVA+ + AA V VD +CPGAT T MF++STL KM SP E + FL+ LP+GRL PEE+ VH+L + PAA + HGAVIDAS GL VRPG ++EY
Sbjct: 148 KKLINISSVGGGI-AAFPGFRLSDGMSKSAVAFLTRQLAAEA--------------------------------------------------VHLNVDIFAICPGATNTPMFQASTLSKM-SPSEQKDFLQRLPKGRLIEPEEIAGIVHFL-AGPAARVLHGAVIDASMGLGVRPGLMSEY 275
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A2V3IE52_9FLOR (Protein FixR n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE52_9FLOR) HSP 1 Score: 101 bits (252), Expect = 2.980e-20 Identity = 65/181 (35.91%), Postives = 89/181 (49.17%), Query Frame = 3
Query: 762 RKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQSPGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTE 1304
R T++F+GSVGGGS +VFP + AAD MSKAA+ Y KH AA+ V +D +C+ PGAT T+MFR STL + ++ F+ ++P+ RL P E+ ++V WL +FHG+V+DAS GLAVRPG TE
Sbjct: 211 RATIVFIGSVGGGSAAVFPEYCAADLMSKAALTYFSKHLAAQH--------------------------------------------------VRDNIDVMCISPGATETEMFRQSTLATIP---DVPAFVDSMPKRRLIQPHEIAKSVFWLSVESPQGVFHGSVLDASMGLAVRPGLQTE 338
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A8I1NUM8_9HYPH (SDR family oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A8I1NUM8_9HYPH) HSP 1 Score: 97.4 bits (241), Expect = 3.040e-20 Identity = 67/181 (37.02%), Postives = 90/181 (49.72%), Query Frame = 3
Query: 765 KTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQSPGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTEY 1307
+ ++ + SVGGG + FPGFR +D MSKAAVA+ + AA +D VD +CPGAT T MF++STL K+ +PGE FL LP+GRL P+E+ VH+L S PA + HGAV+DAS GL VRPG ++E+
Sbjct: 40 RKLINISSVGGGI-TAFPGFRLSDGMSKAAVAFLTRQLAAETVHRD--------------------------------------------------VDVFAVCPGATDTPMFQASTLSKL-TPGERAAFLARLPKGRLIAPKEIAAIVHFLASPPARVL-HGAVLDASMGLGVRPGLMSEH 167
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Match: A0A1X6NQQ0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQQ0_PORUM) HSP 1 Score: 103 bits (258), Expect = 4.590e-20 Identity = 69/181 (38.12%), Postives = 89/181 (49.17%), Query Frame = 3
Query: 762 RKTVLFVGSVGGGSQSVFPGFRAADAMSKAAVAYSCKHFAARRRQQDYDNMDHAEDDDQDEDSYEDRPPTASHARRRTSTTKFARTSGETAVQVTAGVDFLCLCPGATLTDMFRSSTLDKMQSPGELERFLRALPQGRLTLPEEVGEAVHWLCSSPAAAMFHGAVIDASAGLAVRPGSLTE 1304
R ++F+GSVGG S +VFP + AD MSKAA+ Y KH AA +HA GVD +C+ PGAT TDMFR+STL M + E F+ +P+G L P +V AV W+ ++PA + HGAV+DAS GL VRPG TE
Sbjct: 748 RAALIFIGSVGGSSAAVFPEYTPADLMSKAALTYLSKHLAA------------------------------AHAH--------------------TGVDVVCVAPGATETDMFRASTLGPMGAD-ERAAFVGGMPKGVLIQPADVAAAVVWVATTPAGRLLHGAVLDASMGLGVRPGLQTE 877 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig13010.5821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig13010.5821.1 >prot_M-pyrifera_M_contig13010.5821.1 ID=prot_M-pyrifera_M_contig13010.5821.1|Name=mRNA_M-pyrifera_M_contig13010.5821.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp AAARAVPAASPPLAAAAAAAAPAPPRFEGDNPDSAPLVIVTGGSRGIGKAback to top mRNA from alignment at M-pyrifera_M_contig13010:1300..3687+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig13010.5821.1 ID=mRNA_M-pyrifera_M_contig13010.5821.1|Name=mRNA_M-pyrifera_M_contig13010.5821.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2388bp|location=Sequence derived from alignment at M-pyrifera_M_contig13010:1300..3687+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig13010:1300..3687+ >mRNA_M-pyrifera_M_contig13010.5821.1 ID=mRNA_M-pyrifera_M_contig13010.5821.1|Name=mRNA_M-pyrifera_M_contig13010.5821.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1686bp|location=Sequence derived from alignment at M-pyrifera_M_contig13010:1300..3687+ (Macrocystis pyrifera P11B4 male)back to top |