mRNA_M-pyrifera_M_contig1027.582.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1027.582.1
Unique NamemRNA_M-pyrifera_M_contig1027.582.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig1027.582.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 3.010e-67
Identity = 136/246 (55.28%), Postives = 177/246 (71.95%), Query Frame = 1 
Query:    1 MASTLGILDVLSRLREESERASTALAAQEDTNRGLLQRCSEAESESGRTGAIVESLQHQQMELEEARRVAEFRRQESESRLRRLQKQQARLRAGSAHAY--VSAANHSWMCISWTFRMEATESVRHIEELRARLQEKRKELERVREQARETDEDLATKVAARDKVRTEVGLKLEEVAAACSKAEEMEEDNKAVLEKARRVEEEIEETXXXXXXMQEMAVGLQKKNVILRNELRHLKRSLDGERPVQ 732
            MASTLG+LDVLS+LREESERASTAL AQ++TNR LLQ+C EAE+ESGRT    E+LQ ++++LE+    AE  R+E+E RLRRLQ QQAR +  +A      +AA  S + IS  FR +A + VR I ELRARL++KR ELE   E  RE D +++ K A RD V+ EV  +LE VA +CSK ++++ +NK++L +A+RVE EI+E       MQEMAVGLQ+KN ILR+ELRHLKR L+G  P Q
Sbjct:    1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETESGRTDEAKEALQLRKVQLEQGHEDAETGRREAEGRLRRLQMQQARRKQAAARMRENTTAAGASAVAISKRFRADAFDRVRQIGELRARLRDKRGELESAEEDKRELDVEISNKKATRDTVKAEVTSQLEAVALSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGGNPAQ 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig1027.582.1 vs. uniprot
Match: A0A6H5KAN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN2_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 2.760e-20
Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 1 
Query:  430 EQARETDEDLATKVAARDKVRTEVGLKLEEVAAACSKAEEMEEDNKAVLEKARRVEEEIEETXXXXXXMQEMAVGLQKKNVILRNELRHLKRSLDGERPVQ 732
            E+ RE D ++  K A RDKV+ EV  +LE V  +CSK ++++ +NK++L +A+RVE EI+E       MQEMAVGLQ+KN ILR+ELR+LKR L+G+ P Q
Sbjct:   24 EEKRELDVEIGNKKATRDKVKAEVASRLEAVTTSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRYLKRELEGDNPGQ 124
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1027.582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1F2_ECTSI3.010e-6755.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAN2_9PHAE2.760e-2051.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1027contigM-pyrifera_M_contig1027:5024..14046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size732
Cds size732
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1027.582.1prot_M-pyrifera_M_contig1027.582.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1027 5024..14046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815531.0499787-CDS-M-pyrifera_M_contig1027:5023..51521622815531.0499787-CDS-M-pyrifera_M_contig1027:5023..5152Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 5024..5152 -
1692277451.5287495-CDS-M-pyrifera_M_contig1027:5023..51521692277451.5287495-CDS-M-pyrifera_M_contig1027:5023..5152Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 5024..5152 -
1622815531.06556-CDS-M-pyrifera_M_contig1027:6862..69791622815531.06556-CDS-M-pyrifera_M_contig1027:6862..6979Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 6863..6979 -
1692277451.5387301-CDS-M-pyrifera_M_contig1027:6862..69791692277451.5387301-CDS-M-pyrifera_M_contig1027:6862..6979Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 6863..6979 -
1622815531.0766017-CDS-M-pyrifera_M_contig1027:7520..75841622815531.0766017-CDS-M-pyrifera_M_contig1027:7520..7584Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 7521..7584 -
1692277451.5481148-CDS-M-pyrifera_M_contig1027:7520..75841692277451.5481148-CDS-M-pyrifera_M_contig1027:7520..7584Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 7521..7584 -
1622815531.0867388-CDS-M-pyrifera_M_contig1027:8958..90441622815531.0867388-CDS-M-pyrifera_M_contig1027:8958..9044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 8959..9044 -
1692277451.5575933-CDS-M-pyrifera_M_contig1027:8958..90441692277451.5575933-CDS-M-pyrifera_M_contig1027:8958..9044Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 8959..9044 -
1622815531.096906-CDS-M-pyrifera_M_contig1027:9144..92111622815531.096906-CDS-M-pyrifera_M_contig1027:9144..9211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 9145..9211 -
1692277451.5665567-CDS-M-pyrifera_M_contig1027:9144..92111692277451.5665567-CDS-M-pyrifera_M_contig1027:9144..9211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 9145..9211 -
1622815531.1077466-CDS-M-pyrifera_M_contig1027:11103..111921622815531.1077466-CDS-M-pyrifera_M_contig1027:11103..11192Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 11104..11192 -
1692277451.575928-CDS-M-pyrifera_M_contig1027:11103..111921692277451.575928-CDS-M-pyrifera_M_contig1027:11103..11192Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 11104..11192 -
1622815531.1177013-CDS-M-pyrifera_M_contig1027:12108..122011622815531.1177013-CDS-M-pyrifera_M_contig1027:12108..12201Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 12109..12201 -
1692277451.5919938-CDS-M-pyrifera_M_contig1027:12108..122011692277451.5919938-CDS-M-pyrifera_M_contig1027:12108..12201Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 12109..12201 -
1622815531.1581025-CDS-M-pyrifera_M_contig1027:13959..140461622815531.1581025-CDS-M-pyrifera_M_contig1027:13959..14046Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 13960..14046 -
1692277451.6059175-CDS-M-pyrifera_M_contig1027:13959..140461692277451.6059175-CDS-M-pyrifera_M_contig1027:13959..14046Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1027 13960..14046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1027.582.1

>prot_M-pyrifera_M_contig1027.582.1 ID=prot_M-pyrifera_M_contig1027.582.1|Name=mRNA_M-pyrifera_M_contig1027.582.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
MASTLGILDVLSRLREESERASTALAAQEDTNRGLLQRCSEAESESGRTG
AIVESLQHQQMELEEARRVAEFRRQESESRLRRLQKQQARLRAGSAHAYV
SAANHSWMCISWTFRMEATESVRHIEELRARLQEKRKELERVREQARETD
EDLATKVAARDKVRTEVGLKLEEVAAACSKAEEMEEDNKAVLEKARRVEE
EIEETRETQEEMQEMAVGLQKKNVILRNELRHLKRSLDGERPVQ
back to top

mRNA from alignment at M-pyrifera_M_contig1027:5024..14046-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1027.582.1 ID=mRNA_M-pyrifera_M_contig1027.582.1|Name=mRNA_M-pyrifera_M_contig1027.582.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9023bp|location=Sequence derived from alignment at M-pyrifera_M_contig1027:5024..14046- (Macrocystis pyrifera P11B4 male)
ATGGCATCAACCCTCGGCATTCTGGACGTCCTTAGCCGTCTCCGAGAAGA
ATCAGAGCGAGCTTCCACCGCGCTAGCGGCCCAAGAGGTAGGTAGGGTTG
CGTCAAATATTTGCGAAGTGTCTTGCCCTTGGACGATCTGTTTTGTTCAT
CCCTCGTCGATCGTTGGATCGGTACGTACTGTAGAGTCGCGGACGCGACA
TACGCTACTTGCCGTCATGGTAAAGCATTGCTGGCAGCGTCAGCGCTGCC
GGTTGTGGCAGAGTGCACCACTCATTCATCGGTGTTTATGTCCATGTCAT
AGAGAACAATAATGATGACCCTGACAGAGGCGACGCGGCCGTGTTAGATA
CTCTCTCTGCTGCGCCAATCCCTGGCCGCCTGCGCCCGTGAAGCGCGTGA
ACGGCCTCTTCATTTATTTTCGGGTGCAGAGATGCCCGCTGTGCTCGTGC
CGTACCTCACAGTTGACACCTCTATCTATCCACAGTAGAGCAGTTCCTGA
CCCTCTGCCAGAGGTAGACAAATAAATCATCGCATGCACACCCTTTTCTC
TTGACCCTCCTAATAATACATACCTGGTACGATGTAATAAGTAGCACCTA
CAGCAGTACGTAGGTGAGGACATTTCCTACCTACGAAAACGTGTTACTGA
CTATAGTATTTTCACTTCGTACTGGAATGATACAGCACTCGTACGTACAG
AGAGTACTGCTGTAATGTCGCAATTACTTTTTGGCTCTCCTGCCGGGGCT
GCTGTGGAGGTCTGCCCTTCAAGAGCTGTCGATTATTCAGGTCTTAGAAT
AGGGGACTCCTTACCTCCTCAGCAGTTTTTTTTTTTTTTTTTTGCAAGCC
CCGGAGAGCGAGAGGAAATCCCTGTCCACACTTACGTCTCTAGCTTTCGT
GTACCGGTTCGAACCCGGTTCGTTTCTTCCACCTCTCCTCAGCAGGTCCA
TTGTACGCGTTTACGTCTACCAGGTAGTAAATAGATTCTCTAGGCCTATA
GCCTCCAGGCTATATACTATATTCTGCAGGAGGTTATATATGTGTTCAGC
CCCACGGCCGGACATTCAACAGCTATTCTGTGAAAATCCGCGCTCATGGT
TGTACCTGGTATATTATACCTCGTACTGGACCGTACCACTACTGTATATA
CTAGATACGCTCGACACCAGGCAGCATTATTAGCAACGTCGCACACGGTG
CGGTAGTGTGTGGCATGCATCATATGAGAGGGCAACACATTTGCCCCGCC
CCCCCCCCATCCCATTTATTATCACCGCCCTTCTTTTCTCTCTCGATCCT
ATTTACGGGGGAACCTTGGTAAACAGGACCAAATGTTGTTAGTAAAAATA
GGTGTTATATGGGTTTTTGTGTATGCCGTAGGTCCTATTTACTGTGGTCC
TATTTCTTCTCCCTCCTCCCCGCTACGGTTCTTGCCTTGCATTTTTTATC
GCGAGAAAGAAGACTTCGGCCCTTTCTTCCCTCGTCGACTCGCATCGAAT
CGCGCCTACCCACGCTACTATTGATAGATGTTCTCAGCAGTTGTAGAGCA
TTTCCCCGGAAAAGACACTGAAGACGTTGCACTGCTGAACAGCAGTAGTT
ATAGAAGAAGTGGGGCCAGTCCACCTGAACAGCGGTTCATGGTTATGTGT
GCATGGACGTAATGGTTTCGCGCCATCGAATCTCCGTGACGGGACAAAAG
GCTTGGTGGTATACATTAAGCATAATTTGGAAGGTCTACATAGATCGATC
CGATCGATGTAGTGGCCGCCGAATAAAGAATCTCACAAATTCGACAAGGG
ATTTAGCCCCGTCCACTGATTATCCTGCAATCTCACCCCACCCAGGACAC
AAACAGGGGCTTGCTTCAACGATGCTCAGAGGCCGAATCGGAGAGCGGCC
GTACAGGTGCTATCGTGGAGTCTCTTCAGCATCAGCAGGTTTGTGGCTCC
CCTCCCTCTCACTCCTTCCGCCAAAAAATTGCAATAAAAAACGTCTTTCA
ATAATAGTATATATGTGCTGCGCCTCATAACTTTTGTTCGTGTGCCTGGC
TGCCCACGCCGCAGCATATGACCCGACTCTCTAACGCTAACTCTAACGGT
ACCCCGAACCCTGATCCCAATACAACTAGCCCCATGTATAGCCCGGACCC
TAACCTCATTTCCAAACTCTAACCCTGAGCTGTGTGAACTGTTGACTTCC
TCTGCTATTAATAGCAGATTGTCAACCTTTCGTCGTCAAAGCCTTGCTTA
GCGGGGCATTGTGCTGCTATTTTCGGATCCGTATGGCCCTTGGCCGTCGT
CCCCGGCTCCTCTACAGCACATCTATGAGGAGAGCAGTAGTAATCCGGAT
CAACGATAGACCCCTAAAACCGTACACCTCCCTACATGTCCCACTTTTTT
CACACACCATTTCGGGCAGTCTCTGTTTCATACAGTCTGTAACCACGTAG
TTGGTATATCTCTAGGATAAGGAATCAGGACGGCCACTGGGTGTGCTGAC
GGAGCCGGAAATCAATGACGAGTTGGTGTGGAGGCAACACACACATGTTT
GGTTCTGAATATCGCGCTCTCTTCTAGTGTCTAGCGGTAGTTTTCGCAAT
GAACAACCCGGTGTCACACCAAAACGCCGACTTCACCGGGGCTCTTGAAC
CGACGGTCGTCGACCCGGTGGCCGGAAGGACCGCACTTCTGCCCGATTGG
GGCTTTTTCCGAAACCCCTACGAGGTCGCCATTCTGGGATTGGTCGTACT
CGCGTAAAAAAATCTCATTGCTCAGGAAGATGAAACATGTGGAGTTTTTC
AGACTGGCGTAGTGTGGAGAGCCCACATATTATTGGACTGTGCTCGTTTC
GCAGATGGAGCTCGAGGAGGCACGGCGGGTGGCAGAGTTTAGGAGACAAG
AATCTGAGAGCAGGCTGCGGAGACTTCAGAAGCAGCAAGCAAGGTGAGGC
GTAAATTAGCGGGCAAAGCTTTTGCAGGTGCCTGTGCCGGGTGCTGCTTG
AAGTTTGGTGTATTCGTGTCTCGCGTAGGGTGCGTGGGTTGAATTTCCGG
TGGTTTTACAATCACTAGGCTCGCCAACCCGATCGATTTAAAGCTTTCGT
GTACACCAACTTGCAGATATGTACATGGCGGAGGTCTTTATCCGGAACAC
CTCTTGGGGCTTGAGTTAGGTAGACTACAGCTGTAAATGTACCGCCGACA
GTTTGAAAAAGCGCTTATCACGGGAGGCCCGTAGTTAATAGACCTAGAGT
ATGCCCCAAAGCACCCACTTTGGTGCGTGTGTATCAAGAACCACCGCGTG
AAACGAAAACTTGTCGTGCGGTTCATGATAGGCTTTCCATGGACGCTACA
TTCGTATTCTTCCGAGGTACGTTGGGAAGCCTCTTATCACCCTCTTTTTG
GACCTAAATAATAGTGCCCTGCCACCGTGATAGTGTAGTGCCAGGGTGCA
AGGCTGGGTATCTACCCCACACACTAGACAATCCCTTTCTGTATTGGCCC
AGCCTGCGTACCACAAAACAGGAAGTATCCGTACCTGTATCCTTTCCCAA
AATGCCTGGTACGAGCTAACCTTGGTTGCTGCGAAACAGGCGAGACGAAG
CGGCTGCGCAAAAGCACAAGGAAGCTATAGCTGCAGCGGACGCCACCATA
GAGGGCTCAAAGGCAGGTTTGCCCCCGTATAATATTTGATCCTCACGTCT
ACGTTTCAGCAAAACAAGCTGTGGTTACCGCCCATAGGGCTCATCGTTTC
AACTGAACGCCGTTCTTCATCAGAGTTGTCCAACTCGCACTCTTGCACTG
CCCGCGGCGGAATACAATAAGAGCGTCATGTACCTGATTTACCGCGGATA
CACAGTATATATAGTTCGGGTCGGCGTAGGGCCCTCGAACGGTTCCGCAT
CATACGTACGTACTGCTGTAGCACTAAATATTGCCAATTTCGTTGTTCAT
GGAGTCTCCTCCGAGAAGATCGATCGTCATTGAAGATGCGCTAGCCAGTC
GGTTCTATGGAAAGCCGAGGTCGGCCCGAGCATTTTAGTTCTGTCACAAC
ACATGTCCTTGCAGCGGTGAATACTCCACCATGCCTTCTTGCAGAAGACT
AGTCATCGGGACATGCGTCAGTCGGATCCAACTATTAATAGAGGGTTGCA
CAACGTCTTGCGTGGCCGTGGTCGTATGCCCATAGACCCTCGCGTCCCTG
CATGTACAATGTCGGGAACGGAGTACGTCTGGGAAAAACTTGTTGCGTTC
GCCGTTATTGGGGTTACAGGGCTATCTTTACCCTCAAACATTTCTACCCC
TGACAACCATCCACACGAGCAGCGCGCACGCCACTATATTGTACTCTTAG
TAGGACGGGATAAGGAGATCGATAACGGCCGTGCAGTGGTTGACGGGACA
AGCGGTAAATGTATTTTTGGGCCGGGCATAAACCTGGCGTGCGCCTTTCC
AAAACTGAGAACTACTGTAGTGCTTTGGACGAGATGTCACCGAGCAGGTT
GTAAGTTGTTGTTGTCTTCACATTAAATCGTCCTTTCTACCCAGCTTCAT
CAGTACACCCAGTGTCCGTCCTGATTCCTTATCCTAGAGAGATACTGATT
CCTTCCGTGGTCACAGACTGTGAGACAGAGGAAGACCAAAAATATGAAAA
TGATCGCAAATTCAAGTGTCAAGCAAGTGAAATGTCAGCGTACCGGGTAC
GAGAACACAACAACACAAGCAGGACCAAAAATTAAGAGCAAAAAGAAATA
AACAAAAACGGTATAAATCCCATGATGTTCGTCGATGAATTGTCACTTGT
AGCACTATGGTAGAATGCCAAGTCGTTGACATTAGGCTCAGGGCAGGAAG
TGCCCACGCATACGTTAGTGCCGCTAACCACTCATGGATGTGTATATCAT
GGGTGAAGTAATGTGTTGCACACAATAATATGATGGCGACTAGAGCCCTC
ACTGAAACACCTCGCCCACGCGACTGAATGTGTGACACCAATCTCACGTT
AGACGTTTCGCATGGAAGCCACGGAGAGTGTCCGTCACATAGAGGAGCTC
CGGGCTCGCTTGCAGGAGAAGAGGAAAGAGCTCGAGAGGTGCGGTGATCG
ACACAGGGTTTGAAGGGAAATTCCATACCCAAACGTCTACACATGGCTAG
TGTTTGGCCCATCAAGTAAAATCAGACGAGCGGTTCACGTCGTTGATGCC
CAACGTGATTAGGTGTCGAACTCACAATGTGCAGACAAACGGCTTGGTCC
ATTTGAAATGTCACTACTGTGTCGGGCTGGCCACGATACGGGGTTAGGGT
ATTTGCAAGTATATCAGGTAAAGTATGTGCAAGGCTGTCGGTGGTCGTCC
GCCCCAAATTACATCCGCCCCATCTCTGCTTTCCATGGAATATATACTGC
CTTGTGCGCATGCATGCCCACACATTCTCCAGTATTTGTGGGTGGATTGA
GGCGTGTCCCAGGTATGCGATGGGGTGCGCTGAAAGGGCGCATGCTACCG
TCGACCAGCGGTTACGTGTGTATCTACACTCACCTGTATTACAACCAACG
CGACCTGTTAATGTCAATACCAGCACAGGTTGGACTAAGGGGTGGATATA
CTGTACCTTAGCCGGGTGATCGACTCCCGTTTACATTCCTGAACGTGGAA
GGCACCTACGCCCATTTGGCGTCCGCAGGGTCGCGCGTCCTGCCACGGCA
CTGCGACGGTGATTCCGAAGCAACCCCTTCCCGGGAGTTCTCCTCTGAGG
CATGGGTGCGGAAGGGATGCCCCTGCATTTTTCACCTAACTTGCCGAAAT
TAATTCAAACCGCACCCAAAACCTGATTTAGAGAAAAACTACTACAAATA
AGGTGTGACCCGATGAACTTCGCTAAAGCCTGTTAACAGGTACATACATA
TATCACGAAAGCTAAAGCAAAACACTGATATAGTGTCCTGACGATATTGG
GTTTAAGGAGTCCGGTCAGTCAGAAATATGTTTCGGCCAAACCTTGCTTA
CCTGTTTCGTAGCACGCGTCCCACCTGCGCTGCGTGCGTTAGTGCGCTGA
TTGTTCGCTCAATGCGGAGTGAAACGGTGGTGAGTGAAGAGTACAAGAGC
CGAGCAATAAACCGGAGGCGGTACGAACATCTTACCCCAACATTATTCCC
GCTGGTTAAGCTCCTCACGCGAGCAACCGGCGGTCAGCATGAAACCGTCA
CTACACAGCAGTAGACTTGTTTTAGGACTAGCGCAAAAATAAGTGGTCTT
CGGGTTGGGCATGGAATTTTCTTCGACGCCATGGTTTGGGTGAGATGTTG
GGCTCCTCATGTGAGTAGCTCGAAGAGCAATAAGACACCACCCCGATGAG
GCGCCATCCCTACCGTGCTGACAGTGCTGGCAGCGCTGGCAGTGCTCAGC
CGCTCGACATCGCTTTGTAAAGCGCGTGTTTCACCCCACTTCCGGTGCGA
TGGCGTACTCAGGGTCCGCGAGCAGGCGCGTGAAACAGATGAAGACCTTG
CTACAAAAGTGGCCGCCCGAGACAAGGTATGCGTCAGCTAGTATCTGGGG
TACTTTGTTGCAGCCGACGTTACGTTTTAAAATCAGGAGCAGGGTGCGGA
GCGAGGAGGGGGGTCCTGATAGGCGCTTTCCGCAAGATACATTATAATAG
CGTCAGAAGCAATGACCGAGAAGCCTATCACATGCCAAAATGACGTTTGA
TTCAAGTTTCTAGAGGCTCGTGCCAGGTACAGAACAGAAAAACGAAATAT
GTAGCATGTGGCATACCTCGAACTTTTTCGGATGCTACAGCTCTAGCGAG
TTATAAAGCCAGAGCTGGGTCTTTTGTAGATTTCATACCACCTTTTACCG
AAGGGACGGGACTGGACGGGGGGATTCTCATTTGCGGCTTGTCTCAGTCG
CTTGGCCACAATCCCTTTCGAGACGGAGCGGAGGGGGTGATGGGGGAAGA
AGGACTGTAGGATACCTTCGGAATAGCAATTGGCAGCAACGATGATGAAA
GGGTCTAAGACGGAGTGGATGTTCGGTTGTGGGGTTTGGATGTGTTAACT
CACAATATTTTTGGAAGGTGAGAACGGAAGTGGGCCTGAAACTGGAGGAA
GTTGCTGCCGCTTGCTCCAAGGCTGAGGAGATGGAGGAAGACAACAAGGC
CGTTCTGGAAAAAGCAAGGCGTGTAGAAGAAGAGGTAAACGACACCGCAG
ACGTTCGTAAGTCTGAAGTCGGGATTCCTCGACCGCCCGGCAGTCGAACG
ATGTTTTATATATTCGTTGTATTAGACGAGGGCGAGAGGAGCCTTGATGC
TCCCACCTCAATGCCAAATGTTCACCGTAACGCCTGCGAAGATACATGAA
ATCATCTACAACATGTAACCGTCATTGTTGGAATGATCCAAAGGAACTCT
ACTCTTGCGAAGGAGAATGTCTGCGGTAGGGGGGAGGGGGGTAACTGTTA
TCATACTTTGCCGTAGCCGTATGCCCTGCCCATAGATCCTCGCATCCCTT
AAATGCCGGGATAGAGCACGTCTGGTTCTCACCTCCGGCATATATTGCTT
TGCATGGCATTAGTAGACCCAATTGTTCATTACTGACGGGGCTCAACTAC
GACGACCTGACGAATATCTCTGCGACGATTCTTGTGGTTTCCACAAGAAC
ACGTTGCGTGCCTATCTCGTGCGGTGGTTCAATCGGCGGCATAGACTGTT
GTTGGAGTGCCCATGCCAAAGGGTTAAACGATGGTGCGGTGTTGCCTCTC
CGAACGGGGCTGGCGTTTGCCAAGGCTAGGATGCACAAGCTGCTGTCCCG
AGACTTAAGTCATGAACCAGTACTGGTATAGATCACCCTCTGCGCTTCCT
GGTCTGACCAATTGTACGGTCGGGTAACGCCTAGTTTTGGCGAGAGGCTC
CGCACTAGAGGAGCTCTCTGCAATATACCAAATCCAAAAAATGATTTTTA
GAAAAACTGAACTACTCATCCCATGATAATACTCGTAGGGGTTTGCACCC
TTGGGGCCAGAATGTTCTGGCCGGTTGAGGTCCCCAAGTAAGCACCTACC
GCTCACTGCAGTATGATATGGTTTAGCTAGTACATTTAGTTAGGACGAGC
ACATAAAAATATTGGTGGTGTTGCGACACACACGTTCTTCGAAGCTAATG
TTTGTGGTGACACATTGAGCTCCTCATGTAAGGAGCAGCTCAGAAAACAA
GGCACCACCCCAATAAGGGCATTGTTGAAAAAACGTGCACCCGATAATCA
AATCAATCCCATGTAGCCTGCTGTAGCCATTTCATGGTATTTTGGTTTGA
AGCACTGTTGCTATTCCAACGATATTGGGTTAAGGGGTCGGTCAGCCTTA
CCACTCTGGTATATACCGTATCACACTGGGTGATAAGATAATACCCCCCC
TGGGACGAAATTCAGACCCGGTTTCCTCCAAAACATGGGGGGGGCACATA
CGACGAAAATGGTGGCTTTGGAAAGATTTCGTCGAGAAGGTTGCTTGGAC
GAATCGTTCGTCGTACTCAGTACGCCCTCCCCGTTGCCGAGAAACCCAGC
TTTGAAAATCGTCCGAGGCGGTGTGTTGTCTTAACTGTTACACGGTACAC
TATACCTGGTACGTTTGATATTCCTCTTAGACGCTAATTGTTGCCTATAT
TGCCGTCAAATTGATACATATTTTAGGTTAAAGGCGTACCCTATTGTAAC
ACGCGTCATATGTGGAAGGCACGAACCACTATTAATCCCAGGAATGGCAT
TCGCTAAGAGTTGAAGACAGACGACGGGCGAAAACATAGTGTGCGCGACC
TCTCTACTCGTCCTTCGTGAAGGCTAACCGCTTGAGCCACGTACGCTCTT
TTTCTTTTCCAAAATTAATATTTTTCGTTTGGACGATATTCGAGATCGAA
GAGACCCGTGAAACCCAAGAAGAGATGCAGGAGATGGCCGTGGGGTTGCA
GAAGAAAAACGTCATCTTGCGCAACGAGCTCCGACACCTCAAGCGTTCGC
TGGATGGCGAACGTCCGGTGCAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1027:5024..14046-

>mRNA_M-pyrifera_M_contig1027.582.1 ID=mRNA_M-pyrifera_M_contig1027.582.1|Name=mRNA_M-pyrifera_M_contig1027.582.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig1027:5024..14046- (Macrocystis pyrifera P11B4 male)
ATGGCATCAACCCTCGGCATTCTGGACGTCCTTAGCCGTCTCCGAGAAGA
ATCAGAGCGAGCTTCCACCGCGCTAGCGGCCCAAGAGATGGCATCAACCC
TCGGCATTCTGGACGTCCTTAGCCGTCTCCGAGAAGAATCAGAGCGAGCT
TCCACCGCGCTAGCGGCCCAAGAGGACACAAACAGGGGCTTGCTTCAACG
ATGCTCAGAGGCCGAATCGGAGAGCGGCCGTACAGGTGCTATCGTGGAGT
CTCTTCAGCATCAGCAGGACACAAACAGGGGCTTGCTTCAACGATGCTCA
GAGGCCGAATCGGAGAGCGGCCGTACAGGTGCTATCGTGGAGTCTCTTCA
GCATCAGCAGATGGAGCTCGAGGAGGCACGGCGGGTGGCAGAGTTTAGGA
GACAAGAATCTGAGAGCAGGCTGCGGAGACTTCAGAAGCAGCAAGCAAGA
TGGAGCTCGAGGAGGCACGGCGGGTGGCAGAGTTTAGGAGACAAGAATCT
GAGAGCAGGCTGCGGAGACTTCAGAAGCAGCAAGCAAGGCTCAGGGCAGG
AAGTGCCCACGCATACGTTAGTGCCGCTAACCACTCATGGATGTGTATAT
CATGGGCTCAGGGCAGGAAGTGCCCACGCATACGTTAGTGCCGCTAACCA
CTCATGGATGTGTATATCATGGACGTTTCGCATGGAAGCCACGGAGAGTG
TCCGTCACATAGAGGAGCTCCGGGCTCGCTTGCAGGAGAAGAGGAAAGAG
CTCGAGAGACGTTTCGCATGGAAGCCACGGAGAGTGTCCGTCACATAGAG
GAGCTCCGGGCTCGCTTGCAGGAGAAGAGGAAAGAGCTCGAGAGGGTCCG
CGAGCAGGCGCGTGAAACAGATGAAGACCTTGCTACAAAAGTGGCCGCCC
GAGACAAGGGTCCGCGAGCAGGCGCGTGAAACAGATGAAGACCTTGCTAC
AAAAGTGGCCGCCCGAGACAAGGTGAGAACGGAAGTGGGCCTGAAACTGG
AGGAAGTTGCTGCCGCTTGCTCCAAGGCTGAGGAGATGGAGGAAGACAAC
AAGGCCGTTCTGGAAAAAGCAAGGCGTGTAGAAGAAGAGGTGAGAACGGA
AGTGGGCCTGAAACTGGAGGAAGTTGCTGCCGCTTGCTCCAAGGCTGAGG
AGATGGAGGAAGACAACAAGGCCGTTCTGGAAAAAGCAAGGCGTGTAGAA
GAAGAGATCGAAGAGACCCGTGAAACCCAAGAAGAGATGCAGGAGATGGC
CGTGGGGTTGCAGAAGAAAAACGTCATCTTGCGCAACGAGCTCCGACACC
TCAAGCGTTCGCTGGATGGCGAACGTCCGGTGCAGATCGAAGAGACCCGT
GAAACCCAAGAAGAGATGCAGGAGATGGCCGTGGGGTTGCAGAAGAAAAA
CGTCATCTTGCGCAACGAGCTCCGACACCTCAAGCGTTCGCTGGATGGCG
AACGTCCGGTGCAG
back to top