prot_M-pyrifera_M_contig102695.581.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig102695.581.1
Unique Nameprot_M-pyrifera_M_contig102695.581.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length172
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102695.581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 40..130
e-value: 5.6E-9
score: 36.5
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 14..135
e-value: 9.2E-10
score: 40.6
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 25..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102695contigM-pyrifera_M_contig102695:47..562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102695.581.1mRNA_M-pyrifera_M_contig102695.581.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig102695 47..568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig102695.581.1 ID=prot_M-pyrifera_M_contig102695.581.1|Name=mRNA_M-pyrifera_M_contig102695.581.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp
MGMFDRLFKSAEQRTADARASAEKKMHGAMMAFLKREKEFDMGTFETLLR
DAQSAAGVESWRKVLRTAEQQEELEREVGSLLKVVASLTEDEREDPGFIR
RPAKLRLAREAGVDVQTVNRCLTEYESFATVHEWVHSRIAKGLPVPDSTS
EAMALMSRPGERTARVTQAAKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004125Signal_recog_particle_SRP54_M
IPR036891Signal_recog_part_SRP54_M_sf