mRNA_M-pyrifera_M_contig102689.580.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A517PQ92_9PLAN (Multidrug resistance protein MdtA n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PQ92_9PLAN) HSP 1 Score: 417 bits (1072), Expect = 1.120e-143 Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKSDS 648 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKT+QSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKSDS Sbjct: 237 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTFQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKSDS 452
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A517WEF5_9PLAN (Multidrug resistance protein MdtA n=3 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WEF5_9PLAN) HSP 1 Score: 397 bits (1021), Expect = 2.000e-136 Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 1 Query: 31 QLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKSDS 648 QLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRG RQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDR+VVDGIHKLANNQRVVIKSDS Sbjct: 213 QLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGFRQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRIVVDGIHKLANNQRVVIKSDS 418
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A518A7Y0_9PLAN (Solvent efflux pump periplasmic linker SrpA n=6 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A7Y0_9PLAN) HSP 1 Score: 392 bits (1007), Expect = 8.200e-134 Identity = 199/216 (92.13%), Postives = 208/216 (96.30%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKSDS 648 QKA VANLDAQLADNQIDLEDT LKAPF+GRISKRYADEGTVISPETPLLRLVEDQ LEAHIGVPVEMTPGLKRGARQQVQLNGK+YQSTLKAVLPELDPVTRTREVVLAL + AA+ L+PGQVIR+AMEEPVEM+GFWLPLSALARGERGLWSAYAVVPGK EGEL+LEKRQIE+LHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKS S Sbjct: 237 QKAEVANLDAQLADNQIDLEDTELKAPFAGRISKRYADEGTVISPETPLLRLVEDQHLEAHIGVPVEMTPGLKRGARQQVQLNGKSYQSTLKAVLPELDPVTRTREVVLALGEPAAQNLVPGQVIRIAMEEPVEMQGFWLPLSALARGERGLWSAYAVVPGKAEGELVLEKRQIEILHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKSGS 452
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A6CAC3_9PLAN (HlyD_D23 domain-containing protein n=6 Tax=Gimesia TaxID=1649453 RepID=A6CAC3_9PLAN) HSP 1 Score: 340 bits (873), Expect = 1.610e-113 Identity = 169/213 (79.34%), Postives = 191/213 (89.67%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIK 639 QKAVVANLDA L DNQ+DL+DTVLKAPF GRISKRYADEGTVI P PL RLVEDQ+LEAHIGVPVEM LK G++Q+V LNGK+YQSTLKA+LPELDPVTRT+EVVL+L +QAAEQL+PGQVIR+ + EPVEM+GFWLPLS+LARGERGLWSAYAV+PGK GE +LEKRQ+EVLHTE +RVLVRGTLKSGD++V DGIHKL NQRVVIK Sbjct: 236 QKAVVANLDASLEDNQVDLDDTVLKAPFGGRISKRYADEGTVIFPNAPLFRLVEDQRLEAHIGVPVEMAIHLKHGSQQEVGLNGKSYQSTLKAILPELDPVTRTQEVVLSLSEQAAEQLVPGQVIRIEISEPVEMQGFWLPLSSLARGERGLWSAYAVIPGKEAGEKVLEKRQLEVLHTEDNRVLVRGTLKSGDQIVADGIHKLTGNQRVVIK 448
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A517RH14_9PLAN (Multidrug resistance protein MdtA n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RH14_9PLAN) HSP 1 Score: 339 bits (869), Expect = 3.470e-113 Identity = 169/214 (78.97%), Postives = 192/214 (89.72%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKS 642 QKAVVA LDA LADNQ+DL+D VLKAPFSGRISKRYADEGTVISP TPL RLVEDQ+LEAHIGVPVEM L+ G +QQVQLNGKTY++ LKA+LPELDPVTRT+EVVLAL+ A++ L+PGQVIR+A+ EPV+M+GFWLPLSALARGERGLWSAYAV+ GK E E ILEKRQIEVLHTEGDRVLVRGTL++GD++V DGIHKLAN Q VV+KS Sbjct: 216 QKAVVATLDASLADNQVDLDDAVLKAPFSGRISKRYADEGTVISPNTPLFRLVEDQKLEAHIGVPVEMAQSLEPGKQQQVQLNGKTYEAKLKAILPELDPVTRTQEVVLALNTDASKTLVPGQVIRIAISEPVQMQGFWLPLSALARGERGLWSAYAVIKGKQENEKILEKRQIEVLHTEGDRVLVRGTLQAGDQIVADGIHKLANRQPVVVKS 429
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A517WZW3_9PLAN (Toluene efflux pump periplasmic linker protein TtgG n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WZW3_9PLAN) HSP 1 Score: 338 bits (867), Expect = 1.310e-112 Identity = 165/214 (77.10%), Postives = 197/214 (92.06%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKS 642 QKAVVANLDA LADNQ+DL+DTVL APFSGRISKRYADEGTVISP+ PL ++VEDQ+LEA IGVPVEM L+ G ++QVQLNGK+Y+STLKA+LPELDPVTRT+EVVL+L+ +AA+ L+PGQVIR+ +EEPVEM+GFWLPLSALARGERGLWSAYAV+ G+ + ELILEKR+IE+LHTEGDRVLVRGTLK+GD++V++G HKLA+NQRVVIKS Sbjct: 236 QKAVVANLDASLADNQVDLDDTVLTAPFSGRISKRYADEGTVISPDMPLFKIVEDQKLEARIGVPVEMAKSLEHGMQKQVQLNGKSYESTLKAILPELDPVTRTQEVVLSLNAKAAQHLVPGQVIRIEIEEPVEMQGFWLPLSALARGERGLWSAYAVINGEADSELILEKRKIEILHTEGDRVLVRGTLKTGDQIVINGTHKLASNQRVVIKS 449
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A2E2C317_9PLAN (Efflux transporter periplasmic adaptor subunit n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C317_9PLAN) HSP 1 Score: 338 bits (868), Expect = 1.380e-112 Identity = 169/213 (79.34%), Postives = 192/213 (90.14%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIK 639 QKAVVANLDA L DNQ+DL+DTVLKAPFSGRISKRYADEGTVISP PL RLVEDQQLEAHIGVPV+M LK G++Q+V+LNG YQSTLKA+LPELDPVTRTREVVLAL+ +AA+QL+PGQVIR+ + EPVEM+GFWLPLS+LARGERGLWSAYAV+ GK GE ILEKRQ+EVLHTE +RVLVRGT+K+GD++VVDGIHKL NQRVVIK Sbjct: 249 QKAVVANLDASLEDNQVDLDDTVLKAPFSGRISKRYADEGTVISPNAPLFRLVEDQQLEAHIGVPVDMAVNLKHGSQQEVRLNGINYQSTLKAILPELDPVTRTREVVLALNGKAAKQLVPGQVIRIEISEPVEMQGFWLPLSSLARGERGLWSAYAVIAGKEAGEKILEKRQLEVLHTEENRVLVRGTVKTGDQIVVDGIHKLTGNQRVVIK 461
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A518IDY0_9PLAN (Efflux pump periplasmic linker BepF n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IDY0_9PLAN) HSP 1 Score: 331 bits (848), Expect = 4.360e-110 Identity = 164/214 (76.64%), Postives = 190/214 (88.79%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIKS 642 Q AVVANLDA LADNQ+DL+D VLKAPFSGRISKRYADEGTVI PL RLVEDQ+LEAHIGVPVEM L+RG +Q VQLNGK+Y++TLKA+LPELDPVTRT+EVVLAL+ +A++ L+PGQVIR+ + EP++M+GFWLPLSALARGERGLWSAYAVV G E E +LEKRQIEVLHTEGDRVLVRGTL++GD++VVDGIHKLAN Q VV+KS Sbjct: 210 QTAVVANLDASLADNQVDLDDAVLKAPFSGRISKRYADEGTVIPLNVPLFRLVEDQKLEAHIGVPVEMAGNLERGTQQAVQLNGKSYEATLKAILPELDPVTRTQEVVLALNSKASQSLVPGQVIRITISEPIQMQGFWLPLSALARGERGLWSAYAVVDGTQEEETVLEKRQIEVLHTEGDRVLVRGTLQTGDQIVVDGIHKLANRQPVVVKS 423
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A517VFN7_9PLAN (Efflux pump periplasmic linker BepF n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VFN7_9PLAN) HSP 1 Score: 330 bits (847), Expect = 1.390e-109 Identity = 163/213 (76.53%), Postives = 191/213 (89.67%), Query Frame = 1 Query: 1 QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIK 639 QKAVVANLDA L DN++DL+DTVLKAPFSG ISKRYADEGTVI P PL RLVEDQ+LEAHIGVPV+M LKRG++Q+V LNGK YQSTLKA+LPELDPVTRT+EVVL+L ++AA+QL+PGQVIR+ + EPVEM+GFWLPLS+LARGERGLWSAYAV+ GK GE +LEKRQ+EVLHTE +RVLVRGTLK+GD++VVDGIHKL +QRVVI+ Sbjct: 236 QKAVVANLDASLEDNRVDLDDTVLKAPFSGHISKRYADEGTVIFPNVPLFRLVEDQRLEAHIGVPVDMAVNLKRGSQQEVGLNGKNYQSTLKAILPELDPVTRTQEVVLSLSEKAAKQLVPGQVIRIEISEPVEMQGFWLPLSSLARGERGLWSAYAVIAGKEVGENVLEKRQVEVLHTEDNRVLVRGTLKTGDQIVVDGIHKLTGHQRVVIQ 448
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Match: A0A350KFW0_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KFW0_9PLAN) HSP 1 Score: 288 bits (737), Expect = 1.100e-96 Identity = 142/182 (78.02%), Postives = 162/182 (89.01%), Query Frame = 1 Query: 94 ISKRYADEGTVISPETPLLRLVEDQQLEAHIGVPVEMTPGLKRGARQQVQLNGKTYQSTLKAVLPELDPVTRTREVVLALDKQAAEQLIPGQVIRLAMEEPVEMRGFWLPLSALARGERGLWSAYAVVPGKVEGELILEKRQIEVLHTEGDRVLVRGTLKSGDRMVVDGIHKLANNQRVVIK 639 +SKRYADEGTVI P PL RLVEDQ+LEAHIGVPVEM LK G++Q+V LNGK YQSTLKA+LPELDPVTRT+EVVL+L +QAAEQL+PGQVIR+ + EPVEM+GFWLPLS+LARGERGLWSAYAV+PGK GE +LEKRQ+EVLHTE +RVLVRGTLKSGD++V DGIHKL NQRVVIK Sbjct: 1 MSKRYADEGTVIFPNAPLFRLVEDQRLEAHIGVPVEMAIHLKHGSQQEVGLNGKNYQSTLKAILPELDPVTRTQEVVLSLSEQAAEQLVPGQVIRIEISEPVEMQGFWLPLSSLARGERGLWSAYAVIPGKEAGEKVLEKRQLEVLHTEDNRVLVRGTLKSGDQIVADGIHKLTGNQRVVIK 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102689.580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102689.580.1 >prot_M-pyrifera_M_contig102689.580.1 ID=prot_M-pyrifera_M_contig102689.580.1|Name=mRNA_M-pyrifera_M_contig102689.580.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp QKAVVANLDAQLADNQIDLEDTVLKAPFSGRISKRYADEGTVISPETPLLback to top mRNA from alignment at M-pyrifera_M_contig102689:7..657- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102689.580.1 ID=mRNA_M-pyrifera_M_contig102689.580.1|Name=mRNA_M-pyrifera_M_contig102689.580.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig102689:7..657- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102689:7..657- >mRNA_M-pyrifera_M_contig102689.580.1 ID=mRNA_M-pyrifera_M_contig102689.580.1|Name=mRNA_M-pyrifera_M_contig102689.580.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig102689:7..657- (Macrocystis pyrifera P11B4 male)back to top |