mRNA_M-pyrifera_M_contig12950.5795.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 121 bits (303), Expect = 5.820e-30 Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 1
Query: 1 NDTLCREAYRAALILIEEGAISRPGFNGPYTETGRQVGFVNYGTSHIMRLVGTGELAQRASWYQKWNVHLFARPEV---RVHCITNSGREYRY 270
DT+ EAYR+ALILIE+ AISR G NGPY GRQ GFVNYG SH MRLVG+GEL+ R+SWYQKWNVHL+ARPE +H + N + +
Sbjct: 325 TDTINTEAYRSALILIEQDAISRFGINGPYVADGRQSGFVNYGISHTMRLVGSGELSMRSSWYQKWNVHLYARPEAIGGTIHNVLNGDLDITF 417
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 120 bits (301), Expect = 9.890e-30 Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 1
Query: 4 DTLCREAYRAALILIEEGAISRPGFNGPYTETGRQVGFVNYGTSHIMRLVGTGELAQRASWYQKWNVHLFARPE 225
DT+ EAYRAALIL+E+GAIS PG NGPY + RQ GFVNYG SH+MRLVGT EL+Q+++WYQKWNVH+F RPE
Sbjct: 333 DTVNTEAYRAALILLEQGAISGPGSNGPYAGSSRQAGFVNYGVSHLMRLVGTAELSQKSAWYQKWNVHMFVRPE 406
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 113 bits (283), Expect = 3.010e-27 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1 NDTLCREAYRAALILIE-------EGAISRPGFNGPYTETGRQVGFVNYGTSHIMRLVGTGELAQRASWYQKWNVHLFARPE 225
DT+ EAYRAALIL++ AIS PG NGPY ++ RQ GFVNYG SH+MRLVGT ELAQ+++WYQKWNVH+F RPE
Sbjct: 332 TDTVNTEAYRAALILLDPDQGADGRAAISAPGLNGPYADSSRQAGFVNYGVSHLMRLVGTAELAQKSAWYQKWNVHMFVRPE 413
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 108 bits (269), Expect = 2.560e-25 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 4 DTLCREAYRAALILIEEGAISRPGFNGPYTETGRQVGFVNYGTSHIMRLVGTGELAQRASWYQKWNVHLFARPEVRVHCITNS 252
D + EAYR +LIL+E GA SRPG NGP+ ++ RQ GFVN+GTSH RL+G ELAQRAS YQKW VH FARPE + N+
Sbjct: 397 DNINTEAYRGSLILLELGAFSRPGINGPFIDSDRQAGFVNFGTSHYFRLIGAAELAQRASCYQKWQVHRFARPEALGGTLHNT 479
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 100 bits (248), Expect = 1.610e-22 Identity = 45/75 (60.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 1 NDTLCREAYRAALILIEEGAISRPGFNGPYTETGRQVGFVNYGTSHIMRLVGTGELAQRASWYQKWNVHLFARPE 225
D + EAYR ALIL+ A +R G NGP+ + RQ GFVN+G SH RL+G ELAQR+SWYQKW VH FARPE
Sbjct: 277 TDNINTEAYRGALILLGLDAFNRAGVNGPFIDIDRQAGFVNFGISHYFRLIGAAELAQRSSWYQKWQVHRFARPE 351
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Match: UPI001EF0D60F (phosphoesterase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI001EF0D60F) HSP 1 Score: 53.9 bits (128), Expect = 2.970e-6 Identity = 33/95 (34.74%), Postives = 47/95 (49.47%), Query Frame = 1
Query: 1 NDTLCREAYRAALILIEEGAISRPGFN--GPY--TETGRQVGFVNYGTSHIMRLVGTGELAQRASWYQKWNVHLFARPEV---RVHCITNSGREY 264
D + +AA IL+ A GF+ PY + + RQ GF +G SH+M L+G ++ SW+QKW+V + RPE RVH Y
Sbjct: 298 QDIITSSYIKAAFILLF--AFGAEGFDEANPYHPSRSRRQDGFSTFGLSHLMELIGKVHKSEHHSWFQKWHVQRYLRPEEGGGRVHNAKTGVASY 390
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Match: UPI001C401595 (hypothetical protein n=1 Tax=Anthocerotibacter panamensis TaxID=2857077 RepID=UPI001C401595) HSP 1 Score: 51.6 bits (122), Expect = 1.590e-5 Identity = 33/84 (39.29%), Postives = 44/84 (52.38%), Query Frame = 1
Query: 31 AALILIEEGAISRPGFNGPYTETGR--QVGFVNYGTSHIMRLVG-TGELAQRASWYQKWNVHLFARPEV---RVHCITNSGREY 264
A LIL+ G+ + N PYT T Q GF +G H + LV +LA +A+W+QKW VH RPE+ RVH + Y
Sbjct: 86 ACLILLGYGSGAFDAGN-PYTATNSLTQQGFNTFGGPHPLNLVSKAADLALKAAWFQKWQVHRRIRPEMFGGRVHNVLTGAANY 168 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12950.5795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12950.5795.1 >prot_M-pyrifera_M_contig12950.5795.1 ID=prot_M-pyrifera_M_contig12950.5795.1|Name=mRNA_M-pyrifera_M_contig12950.5795.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp NDTLCREAYRAALILIEEGAISRPGFNGPYTETGRQVGFVNYGTSHIMRLback to top mRNA from alignment at M-pyrifera_M_contig12950:8689..8982- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12950.5795.1 ID=mRNA_M-pyrifera_M_contig12950.5795.1|Name=mRNA_M-pyrifera_M_contig12950.5795.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig12950:8689..8982- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12950:8689..8982- >mRNA_M-pyrifera_M_contig12950.5795.1 ID=mRNA_M-pyrifera_M_contig12950.5795.1|Name=mRNA_M-pyrifera_M_contig12950.5795.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig12950:8689..8982- (Macrocystis pyrifera P11B4 male)back to top |