prot_M-pyrifera_M_contig12935.5790.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig12935.5790.1
Unique Name	prot_M-pyrifera_M_contig12935.5790.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	121

Homology

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BLAST of mRNA_M-pyrifera_M_contig12935.5790.1 vs. uniprot
Match: D7G4H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H8_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 9.490e-42
Identity = 83/123 (67.48%), Postives = 91/123 (73.98%), Query Frame = 0

Query:    1 MCFVNAAVTAGRRCPPELLLALCSRGKFLDNFLLGASLGGGFLRAACLQAVFAMVYRTKNLFSGGDGGGGGDAV--GCTRDDVMGVACDALDQGQEEQVRLSGLKLLLGVVAAGASPSTATAQ 121
            MCF N+AVT  RRCPPE L ALCSRG  L  FL GAS G G LRAACLQA+FA+VYRTKN+F GG   G G  V   CT D VM VACDAL + Q  +VR+SGLKLLLGVVAAGASPS A A+
Sbjct: 1434 MCFANSAVTVARRCPPESLPALCSRGNLLGTFLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRVDVSCTCDGVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAK 1556

[Close]

BLAST of mRNA_M-pyrifera_M_contig12935.5790.1 vs. uniprot
Match: A0A6H5KIR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR6_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.300e-41
Identity = 81/123 (65.85%), Postives = 89/123 (72.36%), Query Frame = 0

Query:    1 MCFVNAAVTAGRRCPPELLLALCSRGKFLDNFLLGASLGGGFLRAACLQAVFAMVYRTKNLFSGG--DGGGGGDAVGCTRDDVMGVACDALDQGQEEQVRLSGLKLLLGVVAAGASPSTATAQ 121
            MCF N+ VT  RRCPPE L ALCSRG  L   L GAS G G LRAACLQA+FA+VYRTKN+F GG   G G      CT DDVM VACDAL + Q  +VR+SGLKLLLGVVAAGASPS A A+
Sbjct: 1525 MCFANSVVTVARRCPPEFLPALCSRGNLLGTLLTGASRGSGLLRAACLQALFALVYRTKNVFEGGAISGSGSRGGASCTCDDVMQVACDALGKDQHPEVRVSGLKLLLGVVAAGASPSAAAAK 1647

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig12935.5790.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig12935.5790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G4H8_ECTSI	9.490e-42	67.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KIR6_9PHAE	1.300e-41	65.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 57..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig12935	contig	M-pyrifera_M_contig12935:2967..7882 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig12935.5790.1	mRNA_M-pyrifera_M_contig12935.5790.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig12935 2967..7909 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig12935.5790.1 ID=prot_M-pyrifera_M_contig12935.5790.1|Name=mRNA_M-pyrifera_M_contig12935.5790.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MCFVNAAVTAGRRCPPELLLALCSRGKFLDNFLLGASLGGGFLRAACLQA
VFAMVYRTKNLFSGGDGGGGGDAVGCTRDDVMGVACDALDQGQEEQVRLS
GLKLLLGVVAAGASPSTATAQ