mRNA_M-pyrifera_M_contig1291.5781.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1291.5781.1
Unique NamemRNA_M-pyrifera_M_contig1291.5781.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: D8LD25_ECTSI (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD25_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 9.500e-131
Identity = 213/316 (67.41%), Postives = 248/316 (78.48%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGG----EGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQG 936
            GS MATSLVR GHDV+LFD +  KA  +AA+TGA+ ASSL+E+AQ S  I+TMLPNT NVE VYLG  S  R   +T   PS                     V   G G     +G+LDWVR G+LV+DSSTIDPLASRR+NAIA+ KG+ M+DAPVSGGVP A NATLTF+VGGT+EG++ ARPLLM+MG++AVHCG+AG GC+AKVCNNLSLAISMIGV+EAMSLGSKMGMD  VLASVLN+STARCW+S+ YNP PGVME VPSS+GFQGGFAASLM+KDLHLALQAA+ESSQSLPMGA AH LYS LC++G
Sbjct:    2 GSCMATSLVRAGHDVLLFDVDARKAKAVAADTGATAASSLKEVAQASLFIVTMLPNTSNVEKVYLGGTSHHRREGATTDGPSLSPEKQR--------------VRQAGNGDTETEQGLLDWVRSGTLVVDSSTIDPLASRRVNAIAEIKGVTMVDAPVSGGVPAAANATLTFMVGGTDEGLELARPLLMAMGSKAVHCGDAGAGCIAKVCNNLSLAISMIGVAEAMSLGSKMGMDAKVLASVLNSSTARCWSSEAYNPFPGVMENVPSSRGFQGGFAASLMEKDLHLALQAASESSQSLPMGAHAHQLYSQLCNEG 303          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: A0A7S2RQE6_9STRA (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQE6_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.820e-90
Identity = 159/326 (48.77%), Postives = 208/326 (63.80%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYELIS 978
            G  M  +LV+ G++VV FD + +   E A   GA  A+S+ E+A+   +++TMLP++P+V  VY G                                             EG+L   + GSL IDSSTIDP  +R +N   +  G  M+DAPVSGGV GAE  TLTF+VGG++  +D+ARPLLM MG+  VHCG  GTG VAK+CNNLSLAISMIG +EAM+LG+K+GMDP VLASV+N STARCW+SDTYNPCPGVM+GVP+S+G++GGFA +LM+KDL LA +AA  S   LP+GA AH +Y ++  QG    DF  +Y L+S
Sbjct:   22 GGRMLKNLVKNGNEVVAFDVSPAS-IEAAVSAGAKQAASVAEIARNCETVVTMLPSSPHVTEVYTGP--------------------------------------------EGLLSAAQAGSLFIDSSTIDPNVARVVNEAVETHGSEMIDAPVSGGVGGAEAGTLTFMVGGSDSALDKARPLLMDMGSNIVHCGGNGTGEVAKLCNNLSLAISMIGTAEAMNLGNKLGMDPKVLASVMNTSTARCWSSDTYNPCPGVMDGVPASRGYEGGFANALMEKDLFLAAEAARASGSPLPLGAAAHAVYEMMKAQGQGHLDFGSVYLLLS 302          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: A0A835YMW9_9STRA (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMW9_9STRA)

HSP 1 Score: 274 bits (700), Expect = 5.360e-84
Identity = 157/326 (48.16%), Postives = 205/326 (62.88%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATEL-AAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYELI 975
            GS MA +L++ GH V++ DA   KA  L AA   A  A++L ++A++  +I+TMLPNT +VE V+ G   C+                                               R G+L+IDSSTI P AS  + A A   G+ M+DAPVSGGVP A   TLTFIVGGT+   +RA PLL +MG++A+ CG AG GCVAK+CNNL+LAISM+G++E M+LG K+G+ P VLA V N STARCW+S++YNP PGVM+ VP+S+G+ GGF  +LM+KDL LAL AA ES  S PMGALAH LY+L+   GS  KDFS + +LI
Sbjct:   45 GSNMAANLIKAGHTVLVHDAQPEKAEALVAAHPTARAAAALEDIARECGAIVTMLPNTAHVEMVH-GRLLCA----------------------------------------------ARRGALLIDSSTIAPAASAALAARAAAAGVDMVDAPVSGGVPAAAAGTLTFIVGGTQPAFERAVPLLNAMGSRALLCGSAGAGCVAKLCNNLALAISMVGIAEGMNLGVKLGVKPEVLAQVFNTSTARCWSSESYNPYPGVMDNVPASRGYTGGFTTNLMEKDLFLALAAARESHSSTPMGALAHQLYALMQTHGSGAKDFSAVMQLI 323          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: F1A2S8_DICPU (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A2S8_DICPU)

HSP 1 Score: 270 bits (691), Expect = 4.720e-83
Identity = 148/330 (44.85%), Postives = 202/330 (61.21%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYELISTRSE 990
            G+  A +L++ GH++++FD ++    +L  E GAS+ASS  ELA+    I+TMLP + +V+ VY G                                              GIL  V+PG+L++DSSTIDP  +R ++ IA E    MLD PVSGG  GAE  TLTF+VGG+E   ++A+P L  MG   VHCG  GTG VAKVCNNL L ISM+GVSEAM+LG K+GMDP  LA + N S+ARCW+S+ YNPCPGV+E  P+S+G+ GGF ++LM KDL LA+ +A    + LP+G  AH +Y+LL  +G   KDFS +Y+ ++ RS+
Sbjct:   33 GAHQAANLIKKGHNLMVFDLSKDNVNKLK-EKGASVASSPAELAKNCDVIVTMLPASKHVKGVYCGE--------------------------------------------NGILSTVKPGTLLLDSSTIDPETAREVSKIASEHKATMLDCPVSGGTGGAEAGTLTFMVGGSESDFNKAKPYLECMGKNIVHCGGVGTGQVAKVCNNLVLGISMVGVSEAMNLGVKLGMDPKKLAGIFNTSSARCWSSELYNPCPGVLENSPASRGYTGGFGSALMNKDLGLAVDSAKSIGEPLPLGNSAHQVYTLLVAKGEGNKDFSVVYDFLNKRSD 317          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: A0A6F9DDY1_9ASCI (3-hydroxyisobutyrate dehydrogenase, mitochondrial n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DDY1_9ASCI)

HSP 1 Score: 265 bits (676), Expect = 2.820e-81
Identity = 148/326 (45.40%), Postives = 199/326 (61.04%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYELIS 978
            G  MA +L++  H VV +D     AT+  A+ GA +AS+   +AQK+S IITMLPN+ +VE VY+G                                              GIL+ V+ GS++IDSSTI P +S+++   A  K    +DAPVSGGV  A+ ATLTF+VGG +E  ++A  LL  +G   VHCG  G G  AK+CNN+ LAISMIGVSEAM+LG ++G+D  VLA ++N S+ RCW+SDTYNP PGV+EGVPSS  +QGGF  +LM KDL LA  AA++ +   P+GA AH +Y +LC++G   KDFS IY+ +S
Sbjct:    2 GGPMALNLLKSDHKVVAYDV-MDAATKAIADAGAEIASTPSAVAQKASQIITMLPNSSHVEEVYMGK--------------------------------------------NGILESVQDGSILIDSSTIHPASSKKVAEAAAAKSAFYMDAPVSGGVGAAKAATLTFMVGGEKEPFEKAEKLLAHVGKNVVHCGAVGNGQAAKICNNMLLAISMIGVSEAMNLGMRLGLDSKVLAGIVNTSSGRCWSSDTYNPVPGVLEGVPSSNNYQGGFGTALMYKDLGLAQLAASDMNAQTPLGASAHQIYRMLCEKGYGSKDFSAIYKYLS 282          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: C3Y133_BRAFL (3-hydroxyisobutyrate dehydrogenase n=3 Tax=Branchiostoma TaxID=7737 RepID=C3Y133_BRAFL)

HSP 1 Score: 264 bits (674), Expect = 2.270e-80
Identity = 148/326 (45.40%), Postives = 193/326 (59.20%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYELIS 978
            G  MA  L+  GH V++ D      T L  + GA  ASS  E+A K+  IITMLP++PNV+ VY G                                             +GIL  V+ GSL+IDSSTIDP  S+ +  +A +KG   +DAPVSGG+  A  ATLTF+VGG +E  + A+ LL  MG   V+CG+ G+G   K+CNN+ LAI MIG SE M+LG ++G+DP +LASV+N ST RCWASDTYNP PGVMEGVPSS  +QGGF  +LM KDL LA  AA  +    P+G+LAH +Y +LC++G   KDFS ++  +S
Sbjct:   44 GGPMAKHLIDNGHPVIVHDVYPEAMTSLE-DAGAIKASSPAEVASKADRIITMLPSSPNVQEVYCGE--------------------------------------------QGILSKVKAGSLLIDSSTIDPAVSKEMAEVAAKKGGVYMDAPVSGGIKAAAAATLTFMVGGKQEEFEAAKELLQFMGKNVVYCGDVGSGQAVKICNNMLLAIEMIGTSETMNLGMRLGLDPKLLASVINMSTGRCWASDTYNPVPGVMEGVPSSNNYQGGFGTALMTKDLGLAQNAATATKSPTPLGSLAHQIYRILCNKGYPLKDFSSVFHYLS 324          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: A0A3M6U2N5_POCDA (3-hydroxyisobutyrate dehydrogenase n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U2N5_POCDA)

HSP 1 Score: 263 bits (673), Expect = 2.910e-80
Identity = 138/325 (42.46%), Postives = 200/325 (61.54%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYELI 975
            G  MA +L+  GH++++ D       +L  + GA+ A++  E+A K+++I+TMLP++PNV+ VY G                                              GIL  V+PGSL+ID+STI+P  ++ +  I + KG   LDAPVSGGV  A+  TLTF+VGG +E  +RA  +L  MG   +H G  GTG  AK+CNNL LA+SMIGVSEA +LG ++G++P ++A V+N S+ RCW+SDTYNPCPG++EG+PSS  +QGGFA+ LM KDL LA  AA  ++   PMG+LAH +Y ++C++G A  DFS +++ +
Sbjct:   41 GGPMAKNLLNAGHEILVHDIFSEAVVDLK-QLGAATATTPSEVASKATTIVTMLPSSPNVKEVYCGE--------------------------------------------SGILSSVKPGSLLIDTSTIEPAVAKEMGEIVQGKGATFLDAPVSGGVTAAKGGTLTFMVGGEDEAYERATKILQHMGKNVIHTGAIGTGQAAKICNNLLLAVSMIGVSEATNLGIRLGLEPEMIAKVINTSSGRCWSSDTYNPCPGIIEGIPSSNNYQGGFASQLMVKDLGLAQSAATATTSPTPMGSLAHQIYRIMCNKGYAKLDFSSVFQFL 320          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: A0A562PS77_9PSED (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Pseudomonas duriflava TaxID=459528 RepID=A0A562PS77_9PSED)

HSP 1 Score: 261 bits (668), Expect = 6.260e-80
Identity = 145/324 (44.75%), Postives = 193/324 (59.57%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYEL 972
            G+ MA +L++ GH++ +FD N      L  E GA  A+S ++  Q    +ITMLP   +V  VYLG                                             +G+L  +RPG L+IDSSTIDP  +R + A A E+G++M DAPVSGG  GA+  TLTF+VG + E  DR +P+L  MG   VHCGE GTG +AK+CNNL L ISMIGV+EAM+LG  +G+D  +LA ++N ST RCW+SDTYNP PG++E  PS++G+ GGF A LM KDL LA +AA ++ Q + +GALA  LY  +  +G  GKDFSGI  L
Sbjct:   12 GAPMAHNLLKAGHELTVFDVNERAVIALG-EAGAQPAASPQDAVQTCDLVITMLPAAAHVRTVYLGE--------------------------------------------QGVLTGIRPGVLLIDSSTIDPQTAREVAAAAAEQGLSMADAPVSGGTGGAQAGTLTFMVGASAELFDRIQPVLACMGKNIVHCGELGTGQIAKICNNLLLGISMIGVAEAMALGDALGIDTKILAGIINTSTGRCWSSDTYNPWPGIIETAPSARGYTGGFGADLMLKDLGLATEAAKQARQPVLLGALAQQLYQSMSQRGDGGKDFSGIVNL 290          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: A0A7S2RG04_9STRA (3-hydroxyisobutyrate dehydrogenase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RG04_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.410e-79
Identity = 148/322 (45.96%), Postives = 193/322 (59.94%), Query Frame = 1
Query:   10 MATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIYELI 975
            MA +L++ GH VV FD  ++    + AE GA +A+S  E+A+  S+IITMLP+  +V+ VY                                            GG EGIL  +  GS  +DSSTIDP  SR ++      G A +DAPVSGGV GAE  TLTF+VGG+E+  +R++ +L +MG   VHCG+ GTG VAK+CNN+ LA+SM+GVSEAMSLGSK+G+D   LA +LN STARCW+SDTYNP PGVMEGVP+S+ ++GGF ++LM KDL L   AA      +PMG  AH  Y LL   G   KDF   Y+ +
Sbjct:   17 MANNLLKRGHQVVAFDVVQTAKDRIKAE-GAEVAASPAEMAEACSTIITMLPSNDHVKDVY--------------------------------------------GGNEGILKTLNKGSFCVDSSTIDPAVSRFVSEQVFNSGSAFVDAPVSGGVGGAEAGTLTFMVGGSEDSFERSKAVLQNMGGNIVHCGDVGTGQVAKLCNNMILAVSMLGVSEAMSLGSKLGIDRKTLAGILNTSTARCWSSDTYNPAPGVMEGVPASRDYEGGFGSALMLKDLGLVQDAAKSVGAPIPMGEHAHSFYQLLVQNGLGQKDFGVAYKFL 293          
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Match: A0A4Y2PCG3_ARAVE (3-hydroxyisobutyrate dehydrogenase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2PCG3_ARAVE)

HSP 1 Score: 260 bits (665), Expect = 1.490e-79
Identity = 141/322 (43.79%), Postives = 196/322 (60.87%), Query Frame = 1
Query:    1 GSGMATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITMLPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVXXXXXXXXXXXXQGGGVYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAPVSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVAKVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYNPCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHHLYSLLCDQGSAGKDFSGIY 966
            GS MA +LV  GH + ++D +  + T+L  ++GA  A    E+AQ    IITMLP++P+V+ VY                                               +GI   V+PG+L+ID STIDP  +R +   A+++G   LDAPVSGGV  A+NATLTF+VGG E   +  + LL+ MG  AVHCG+ GTG  AK+CNN++LAISMIG SEAM+LG ++G+DP ++  +LN S+ RCWAS+ YNP PGVME VPS+ G+QGGF  +LM KDL LA  AA ++S   P+G+LAH +Y ++ + G + KDFS ++
Sbjct:    2 GSHMAKNLVAKGHSITVYDVHPERITQLV-DSGALFAQHPAEVAQNCDRIITMLPSSPHVQEVYTAE--------------------------------------------QGIFQQVKPGALLIDCSTIDPSVTRELAIRAQKRGAVFLDAPVSGGVNAAKNATLTFMVGGKESEFEAVKDLLLCMGENAVHCGDVGTGQGAKICNNMALAISMIGTSEAMNLGIRLGLDPKMMGKILNMSSGRCWASEVYNPVPGVMENVPSTNGYQGGFGTALMAKDLGLAQLAATKTSSPTPLGSLAHQIYRMMINSGLSNKDFSSVF 278          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1291.5781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD25_ECTSI9.500e-13167.413-hydroxyisobutyrate dehydrogenase n=1 Tax=Ectocar... [more]
A0A7S2RQE6_9STRA1.820e-9048.773-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhizoch... [more]
A0A835YMW9_9STRA5.360e-8448.163-hydroxyisobutyrate dehydrogenase n=1 Tax=Tribone... [more]
F1A2S8_DICPU4.720e-8344.853-hydroxyisobutyrate dehydrogenase n=1 Tax=Dictyos... [more]
A0A6F9DDY1_9ASCI2.820e-8145.403-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
C3Y133_BRAFL2.270e-8045.403-hydroxyisobutyrate dehydrogenase n=3 Tax=Branchi... [more]
A0A3M6U2N5_POCDA2.910e-8042.463-hydroxyisobutyrate dehydrogenase n=2 Tax=Pocillo... [more]
A0A562PS77_9PSED6.260e-8044.753-hydroxyisobutyrate dehydrogenase n=1 Tax=Pseudom... [more]
A0A7S2RG04_9STRA1.410e-7945.963-hydroxyisobutyrate dehydrogenase n=1 Tax=labyrin... [more]
A0A4Y2PCG3_ARAVE1.490e-7943.793-hydroxyisobutyrate dehydrogenase n=1 Tax=Araneus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1291contigM-pyrifera_M_contig1291:694..11083 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.1
Seed ortholog evalue8.6e-108
Seed eggNOG ortholog2880.D8LD25
KEGG rclassRC00099
KEGG koko:K00020
KEGG ReactionR05066
KEGG Pathwayko00280,ko01100,map00280,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008442,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071704,GO:1901564
EggNOG free text desc.3hydroxyisobutyrate dehydrogenase
EggNOG OGsCOG2084@1,KOG0409@2759
EC1.1.1.31
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1649
Cds size1083
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815801.816194-UTR-M-pyrifera_M_contig1291:693..12501622815801.816194-UTR-M-pyrifera_M_contig1291:693..1250Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1291 694..1250 -
1692277576.3719323-UTR-M-pyrifera_M_contig1291:693..12501692277576.3719323-UTR-M-pyrifera_M_contig1291:693..1250Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1291 694..1250 -
1622815801.903939-UTR-M-pyrifera_M_contig1291:11074..110831622815801.903939-UTR-M-pyrifera_M_contig1291:11074..11083Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1291 11075..11083 -
1692277576.4524772-UTR-M-pyrifera_M_contig1291:11074..110831692277576.4524772-UTR-M-pyrifera_M_contig1291:11074..11083Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1291 11075..11083 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815801.8302095-CDS-M-pyrifera_M_contig1291:1250..14071622815801.8302095-CDS-M-pyrifera_M_contig1291:1250..1407Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 1251..1407 -
1692277576.3874583-CDS-M-pyrifera_M_contig1291:1250..14071692277576.3874583-CDS-M-pyrifera_M_contig1291:1250..1407Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 1251..1407 -
1622815801.8422306-CDS-M-pyrifera_M_contig1291:2212..22891622815801.8422306-CDS-M-pyrifera_M_contig1291:2212..2289Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 2213..2289 -
1692277576.3952682-CDS-M-pyrifera_M_contig1291:2212..22891692277576.3952682-CDS-M-pyrifera_M_contig1291:2212..2289Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 2213..2289 -
1622815801.8535976-CDS-M-pyrifera_M_contig1291:3774..39331622815801.8535976-CDS-M-pyrifera_M_contig1291:3774..3933Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 3775..3933 -
1692277576.4047987-CDS-M-pyrifera_M_contig1291:3774..39331692277576.4047987-CDS-M-pyrifera_M_contig1291:3774..3933Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 3775..3933 -
1622815801.8636827-CDS-M-pyrifera_M_contig1291:5756..58431622815801.8636827-CDS-M-pyrifera_M_contig1291:5756..5843Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 5757..5843 -
1692277576.4144237-CDS-M-pyrifera_M_contig1291:5756..58431692277576.4144237-CDS-M-pyrifera_M_contig1291:5756..5843Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 5757..5843 -
1622815801.873766-CDS-M-pyrifera_M_contig1291:7797..79741622815801.873766-CDS-M-pyrifera_M_contig1291:7797..7974Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 7798..7974 -
1692277576.42357-CDS-M-pyrifera_M_contig1291:7797..79741692277576.42357-CDS-M-pyrifera_M_contig1291:7797..7974Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 7798..7974 -
1622815801.883672-CDS-M-pyrifera_M_contig1291:9085..94621622815801.883672-CDS-M-pyrifera_M_contig1291:9085..9462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 9086..9462 -
1692277576.4332683-CDS-M-pyrifera_M_contig1291:9085..94621692277576.4332683-CDS-M-pyrifera_M_contig1291:9085..9462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 9086..9462 -
1622815801.8931077-CDS-M-pyrifera_M_contig1291:11025..110741622815801.8931077-CDS-M-pyrifera_M_contig1291:11025..11074Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 11026..11074 -
1692277576.4428227-CDS-M-pyrifera_M_contig1291:11025..110741692277576.4428227-CDS-M-pyrifera_M_contig1291:11025..11074Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1291 11026..11074 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1291.5781.1prot_M-pyrifera_M_contig1291.5781.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1291 1251..11074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1291.5781.1

>prot_M-pyrifera_M_contig1291.5781.1 ID=prot_M-pyrifera_M_contig1291.5781.1|Name=mRNA_M-pyrifera_M_contig1291.5781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=361bp
MATSLVRGGHDVVLFDANRSKATELAAETGASLASSLRELAQKSSSIITM
LPNTPNVEAVYLGNPSCSRTGNSTDVSPSREKTVEETVQETVQETVQGGG
VYMGGGGGEGILDWVRPGSLVIDSSTIDPLASRRINAIAKEKGIAMLDAP
VSGGVPGAENATLTFIVGGTEEGMDRARPLLMSMGAQAVHCGEAGTGCVA
KVCNNLSLAISMIGVSEAMSLGSKMGMDPTVLASVLNASTARCWASDTYN
PCPGVMEGVPSSKGFQGGFAASLMQKDLHLALQAANESSQSLPMGALAHH
LYSLLCDQGSAGKDFSGIYELISTRSESGGLSDSSKPSRSPTSKSPKPQS
PESAQSSTPS*
back to top

mRNA from alignment at M-pyrifera_M_contig1291:694..11083-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1291.5781.1 ID=mRNA_M-pyrifera_M_contig1291.5781.1|Name=mRNA_M-pyrifera_M_contig1291.5781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10390bp|location=Sequence derived from alignment at M-pyrifera_M_contig1291:694..11083- (Macrocystis pyrifera P11B4 male)
GGTTCCGGTATGGCCACTAGCTTGGTCAGAGGCGGACACGACGTCGTGCT TTTCGATGGTGAGTTTGGGCCCTTTTTTAACGGAGAATACGCACTATACA CGCTGCTGTACTGGTGTACTGCTTTTTACACGAGTGTTGTTTGAGTTGGC TATTTTTTTTTCGCTGAGGTATTCTTCCGCTCCAAGTTTTGAACCCAGTC CTGTGACCACGGACTCAATGGTTTAGACATGAGTTAATGTGAAAATAAAG ACACCAAGTACTGCTGTCCCAGTGCACTACCGGCTCTCTGACAAAGCATG CCATGAGCTCCGATAAAAGGCACGCCCCAAGCTTTCCTATGGCGTGGCTT ATGAAGAAAGAGCCCCACGAGAAGCCCCGTCCGACATTCCCGGGAAAATT ACGAATTCGGGAGCGCTCATGCTATAGTTGGCATGAGAGCACGCTCTTTC TCAAACGTTACGGGGGATCATAGTATATAGGACCAAATATTGTTACTAAA AATAGGTAAATATGTAGGTTTTTGTGCGTACCGTAGGTCCTATTTACTGG GGTCCTCCGTAATGGTATATCTAGTCTGACCCTTACATGGCAAAAACTGC AGCCCAGTTTTGGGGAGAAAATACTTGCAATTTTGAGCACTTTGTCACCC AAACGGGACTGCAGTCCTTAACTTGAACCCCGGTTTCTCATCAGAGGGTC AGTACTGCACGCACATAAAAATGCCGTATATTCATAACGCGCAACATAGC TCCTAGGCGAATTTTCCAGCACAAGCGGGACACACACACAAAATTGCAAT GGTGCCTTTGTAACGGCCTCGTCAGGACCTTTCCGTAGACGTATATATGG AGGCGTTTGCGCTCTCCCCTTTGTCGAGAAAATCACCTCGGAAATTCGTC CGAGGGGGTGTGCTATCTTATCACCCTAGGGTGATACACCTGGTACCAGG GATAGTTGTCACGGCGTGGTACGGGTAGTTACAGTACCGGTAACAGAGTC ACCCTTTACGTAGCTGAAACATCTGCCGTAACTATTTATGATACCCTATA CCCGATATAAAAGCGCCTCCTGTTTCAGAGGAAACCCTTACAACTGACAG CCGAACATACTGCAACACGGCACGCAACGAGAAGCGGTGTGACTGAAGGT GGGCCTGTCCTAATGAGAGACTACCGCGGGAGCGGCTTCACCGCCCCTCA CTGTGACTAAAGCTGAACTCGAGTGTTGCAAACCATTAAAAAAAGCCTCT GTATTCTAGGAAAACGTGTCACAACCGGACGTTAGCAAGCTCTACGCACG GTTGAAGGTTAGTAAGCCGTATCCACAGTAATCGGAATCCATCGAGACCC CCCAGACGCTGTCGTTCATTTGCAAAAAAATCCGCTTCACAAGCGGCTCT TAGTAGGATGCAGCTCACCCTTCATGCGACTCGCCGACCACCTCGCGGCG CTTCGTGCTTGGTGCAAGCAATGTCTGCCTGGTCGGTGAAAACCCGACGT GTTCTGTCTCGGCGTTGTAGAGATGCGAGCGTCTATGGTCATACGACTAC GGCCATTCATGACATGAGTAACCCCCCCCCTCCGTTCCTCTCTCTCCTCT CGCCCATCTCTATCTATCCAGCTAATCGATCGAAGGCCACTGAGCTGGCG GCTGAAACAGGTGCCAGCTTGGCCTCCTCCCTCCGAGAACTCGCGCAGAA GAGCTCCTCCATCATCACCATGTTGCCGAACACCCCAAATGTTGAAGCCG TTTACCTTGGAAACCCCTCCTGCTCCCGGACGGGGAATTCAACGGATGTA TCACCGTCCCGTGAGAAGACCGTCGAGGAGACCGTTCAGGAGACCGTTCA GGAGACCGTTCAGGGAGGCGGTGTTTATATGGGGGGTGGGGGAGGAGAAG GTATTTTGGACTGGGTCCGACCGGGAAGTCTTGTGATTGACAGCAGCACG ATTGATCCGCTTGCTTCTCGAAGAATCAACGCCATCGCCAAGGAAAAGGT GAGCAAGTCAGGGAAAAGTATATAATACGTACTTATTTACTCATTTCTCT CCCTTTAGTGTGTTTGCTCTTCTTTTCACGCTTCTCCCTAGTCATAACTT AGATTCGGGGTCACGTGAAGCAGCAGGTTCTTTCTTCTCCCTCTTCCCCA CCGCGGTTAGCGCCTTGAAGACTCTAGCCCTTTCTTCCCTCGTCAACTAT TAATAGCGTCGAATAAATAGACTATATCCTCAAGTATATTCTCTAGTGTC TTGATCGGGGGCGGAGGGGGGGGCGAGGGGTGGAGGGCGGGCGGGGAGGG AGAGGAGGCTAGCGGGAGGGGAGGGAGGAGGAGGTGGGCGGGGACGGAGA GGAGAGTGGAAGAGGAGTTGATGGGTTCCTCGAGGGCGGCAGTGACACAG TAGTCGTAGTTTGGTAGCAGACCAGCTACCGCCAGGGGAGTGGAAGGCGT GAGGCTCCTCCTATTGCTTGCCGGTTCAAAAACGTTCGCTTCTGATGATA TGACGCAGAGCCAGGGTATCCCATATATCCATATATCCGTATGTCATTGA GGCGGTGTGTGCGTGTGGACATGTATGTCGTGGGGATAGAGCACGTCCCA TGTCCTCGCATGATCTGTAAACACGTCGTCTTAAGGCCTCCTAATAAAAG TTTAATGGGCAGCGTTGTTAATGGACGCGGCCAAGAAACGAGACATACGA AAAAAAAATCGCCAAAAGTTAGCACAGGACCTGTTTTTTCGGGAGTGGTG AGCTACTACAGGGCAGAAAAAGCCTTTGGGTTTCGATCACCACATGGCAT TATTCACCTCATTTGTTTTGCTGTCCCTTTGGGAACGCAGGTATAGCGAC CTCAAAAACGAAAACTGCGGCAACTATCACCCGTGCAGGAAAAATGTGCA GCAGCACGAGCACCATCTCCCGACGTTTCATTTCGGACCCATCTCATATT ACCGCAGCAGCCGGGGTTGGGTCATGTGCCCAATCCTGTAATCGTCATTT GCATTCGACAGCTTTTCCCTCTGGAATCTCGAAGGAGTTCGTTTAGTATA CGGTGGGCGTTTCCGCCCGTTTGTGAACCACCCGGCCCGACCCACTTATG TCTATCCAGGGGATTGCTATGCTTGACGCTCCAGTCAGCGGAGGAGTTCC CGGCGCTGAAAACGCCACTCTTACGTTCATCGTAGGCGGGACTGAAGAGG GGATGGATCGCGCCCGTCCCCTTTTGATGTCCATGGGGGCTCAGGCTGTA CATTGCGGGGAGGCCGGCACCGGGTGTGTTGCAAAGGTAAGGTTCGTCGT ATATCAGGTATACTGGTAGGCTGGACTGAGGAGGGGATAATTATTGTCGT CCCCTTTTATCTGTTCATTGTGATTCAGGTTGTGTGTCGTGGGAGGGGCT AAATAATCATGTAGTGGCGGGGCTGGGGAGGGAATAGATCGGGGTCGTCC CCTCTCAATGCCCAAGGAGATTATCGGGATGCTGGCACCGGGTGCGCTGT GAAGGTAAGTGTCATCGTAGGCGGGACTGAAGAGGGGATAGATCGCGGTC GTCCCCTCTTGATGGCCATGGGGGCGATTCGTTGTGAGGAGGCCGGCACC AGGTGTATTGCGACGGTAACATTCGCGGTAGGCGAGACTGAGGAGGGGAT GGGTCACGATCTTCCCCTCTTTAAGGCCATGGAGGTTCAGGTTGCGTGTT AGGGCGAGGGCGGCATGGAATTCACTTCGAAGGTGATACTCATCGTGTAC CGGTAGGCGGGACTAAGAAGGGGATTTATGAGTCTCGTTTCCTCTTTATG GCCCTGGTGGTTCAGGTTAGGTGTTGTGGGGAGGCCGGCACCGGGAGTAT TGCGAAGGTGGCATTCATCGTACATAGGCGGGACTGGGGAGAGGATATAT CATGGTCGTCCCCTTTAGGCGGGAGTGAGTAGGGGGTGCATCGTAGTCGT CCCCTCTTTGTGGCCATGATCACTCAGGTAGTGTGTTGTAGGGAGGCCGG CACCGGGTGTGCTGCGAAGGAAGGGTTGACCAGATATAGGCGGGACTAAG GGGGGCATGGGTTGCTATAGGCCTCTCTCCACATGCATGCGGGCCTGGGT TGTGTATTGTGGGGAGGCCGGCATCGGGCTTACTGCGGAGGTGATGCTCA TCGTGGGCGAGATCGAGGAGGGGATGGATCGCGATCGTCCCCTCTATAGG ACCACTGGGGCTCATGTTGTGTGTTGTGGCGAGGCTGGCACCGAGTGAAA TTGTGAAGGTTAGACCGTGGAGAGTGCGCGACGACGTAAATACCTATGAA TACCCGGTATGTTTTGCGGCGATATCCGGGCCATGTTTTTTTCTGTACGA GGTGGGTGTCAATCGGAGAACTGCGATGTACCATAAGACAGTTCTGTCAC TGGTACAAAAGATGCCGCGTTTGAGCGACAGGCGGATGAAGATGAAACGG ACGCAGCAAAGGCAGCGTTCGAACCGAGTAACGCGCCATTGCTCGTTTCT TGGCGTATTTTTTGTTTCAAACTCGACGACTCCCGTCCGCATCCTGTCAT CGCCGTTCTCGACACATTTGACGCCCGTTATTTTGCGATGCACACTTCTT CGGTGAAAAAAAAATCCTGTTCATGCGATACTACCGTACCTTCTCTTCCC TCAGGAGGACCTTTGGCTCGTCGTTTTCCGTCGACGTGGCGGCTCTAAGG CGGCACTATTCTACCCAACAAGCCTTGCCCAGCCCAAATGGTACTCAGAT GGGGGAACTGTACGCAGCACGTTTTGGCTAAAGATTTCTGACGACAGTGT TACGGGACTTCTCCACGCAGGAACTGTGCCCAACTTCGCTTGTTTTTGCC ATCATTTTCGTGAGGGGCCTTGTTCATGGGATTGATTCGATAGTTCATCA GGCCAAGTGTGCATTTTTTTCACAAGAACCAGTTTTTGGGTCATGTAGAG CTCCTCAAAAATGAGGACCCTCAGGAATTGGCCGGTGCTCTCCTGTTGTA GCATGCCTCCATATACTTGAGAAACCGCGGTTTGACCCCTTGACTGACCG CTCCCCTACACTGCAACCGGTAGAATGGGGCCTAAAGAGGCGTTGACGCT CCCAAGGCGACTGCTCTCCTACTATCTTTGTCTGTTGCCCAATGGTCGGA GTCTAAGCACTGCTGTAAGTTTTGAATATCTCTATGTTTTGATGTTTTTG CAACTTTCTCTTGTCTGTGGCCCCATCCATACCCTCAAAGGTCTGCAACA ACCTGAGCCTGGCGATTTCCATGATTGGAGTGTCGGAAGCCATGAGTTTG GGCTCCAAAATGGGAATGGATCCAACGGTGAGCCTATACCTGTCCGGGTG CCCAACGAGCTGTCTCGGTTTTGTTGTTTTTTTCGGTTTGCTGTATTCGT CACCTTAAGACTCCAGACTGATTGGAGCCTTCCCTGTGTAGGAGTAGATT GCGACTACGAGTACACAACACGCATGGATGTGGTCCGAAAATTGAAAATT AAAAATTAAAACAAGGGCACAGACGTGCTCATTTTGTAGACAGGAAAACA AAAAAAAAACGTACGTAGAGGAACGATTGACAACCCTGGAAAAACGCTAC GCGCGCAGAGTGTAGTGTTGCTCAAGATTTACCTGGTAAGCATCAACGCG CCGCGACTCCTGCTGTGGTTGAACACAAGAGTGTCGGCTTGCGCCAGCCA CGATGCGGCATATACCGTAAACCTCAGCGACGGTGCGTTGTATATACATA TTTTTTTATGCCTGCGATGTGAACGCTCATCATTCAGTCCAGGTTAGCGT TGTGCTGCAACCCTGCAAAAAGAACGCCTACGTGTACACATGATGTTGCA TGAACTCCACCGGTCCTCCGCTTTTTGTAAGTGTCACGCGCGTTCCACTT CATTCCTCGTGAAGGGCACAGGCCGTGTGCCGGCATGTGAGATGACTTTG CGACTGCGGTGCTGCAGGCCTGATACGCTTGTGCCCGATCCACTACAATA GCCGCCAGTAACATCACCACCAGGGTAGTGATGTCAAGAAGTGGCCACCA ACAGTAGGATTTTGATATCAAGCATTTTGTCGCGGACACTCCCAATGAGC GTGTACAACGTTTATGTTTTCAGCACTATCCCTGACCCTAACACCCTAGC CTTAATCCCAAACCCCCAGGAATGGTCCAGGGAAAGTTCTCGGCCAATGA GAAATTATATTTTGTTGCCTAAATAATGTACTCGCTTTGATTACAGCTGG GTAACTTCATGCTTTATCAGCTTGAACACCGGTTATAACAACTTGTAGTA TGTATACATACATACTGGGTTTGTTCTCTTGATTTTGTACCAAGTATCCG TTTTTTCTGCTCATGAGAGACGCCCATCACACCCAAAATCAGTGCTGTTT TTTTTCGCCAGAGACCAGGATAAACGTTTCATAGTCACAAAGAGCACGAA ACAGAGAGCACAAATTGAAGGAGCAAAACATAGCTACAACTATTGGACCT CTTGTTCAGAGCTATTTGGTTGAGATTTTCCTCCTCTTGTTGCAGTTGTC TGTGAGAGAGATATTTTGAGCTGGACATTGCCGCAGGACTGTCTGAGCAA TGGCATACTGGAGATAGCCGGTGGCTTACTCGGTATGGATTGTTGATGGA ACTAAAGTGGGTTTCGTCCGCTTTGCTTGGCAACAGAGTGATGTCATTCG CTCAGTTCACTCTGCATCACACCAGACACTGCAGGGGGAGATGCTGAGGA AGTACTCGTGGAGTGCAACACGTTCAATACTGGCAACAACGACATGGCCT GTTCAGACTGCCCCTTAGCCAAGTGTAAATACCGTGTAGAGGCGTTTTAC GATAGAGGTTCACCCTAAATTTTCTGAGGCTCCTCACTTGACCTTAAGGA GCTCCACACCTATAACCCGAGCACTGACTCCAGCTAAAATCTAATTGCAT CCCGATGAATGATCCCACTGTCCAGGTATACAATAACGCCCTTTTTCAAA ACAAGATTGGCATCATTCGGACGATTTCGGGTTAAGGAGCCCTATTATTC GGGAAACATTTTAGCAGAAATGTGCTACCTCTATCATTGAACGCGTCTGT ACCTAGTATAAAGCAGTAACAACGGAGGCAATCGTGCTGCGAACGATCAG GTACTGGCGAGTGTTCTGAACGCATCGACCGCACGCTGCTGGGCCTCCGA CACTTACAACCCCTGCCCTGGGGTGATGGAGGGCGTGCCCTCGTCCAAGG GTTTCCAGGGAGGGTTTGCGGCGTCTTTGATGCAGAAAGATCTGCATCTC GCTTTGCAGGTTTGTTTGTGAGCGACATATATATGTTGCTACATGTACAT GATTATCACTGAGCGAACATCTATTTCGGCGGACCATAGTATATTGGACC AAATATTGTCAGTAAAAATAGTGAAATATATATCTGGTAGCTTTTGTATG TGTGCCGTATGTCCTACCAGGTATTTGCTATGGTCCCCCCGTAATAGTGA AAGGAGCAGGATCACGTTTTGAATCCGTCGTGCCCACTGAGCTAATAGCC AGCGCTGACTGTTACCTCGGTGCTCATGGTGGGAAACTGTTATTGGAACG TGTCTTGAGCGATAGGTACCCTTGTCTTGAGACATGGGTGTATCTACAGC AGTATATAGCGATGCATGTCTTGATCGATGCATGTCTCTAGCAATGCATC TCTCGAGCGATGTATCTATTGAGCCATCCATGTCTCGAGTGATGCGTGTA GTGGGCGGTGCATGTCTTGCGCGATGGATGTCTTGAGTGATGCATATGTT GAACGATATCATGTCTTGGGCGATGCAGATGGGCATGCATTTTTTTTTGC GATTCTATGTCTCGACCGATGCGTGTCTCGACCGATGCATAGTGAGCGAT GTGCGTGTCTAGCTATATGAATGCCTTGAGCGGCGCATGTCTTGAACGAC GCATGTCTTGAGCGTTTCGATTATTATTACGGGGGTCCATAGTTAATAGA ACCTATGGTATACATAAAAACTTATATATTTACCTATTTTTTTTAACAAT ATTTGATCCTGTTAACTATGGACCCCCGTAATAGTAAGAGATGCATACAA CATGTTAAAACAAGAATGTCTTGAACGGTGCACGCCTTGAGCGATGCATG TCTGGAGCGATCGTGGTGAACACATGAAATGGTTTTGTGGATGAAAGAGA GGGCGAGGGGTGTACCTTCTATTTCGTATATCTTGGCGCGCTGAGTGCGA TGTATAGTTCGCACCTGGTACAGTAAGTTGCTTATCGATTGCAAGTGTTC GGAAACATTTACGATATGCCATCTCTTGAGTTTGGTTGCGAACAAGGAGA CAAGGAAACGCCTCATTACATATTGACGCTTCGTAGCGCTGCAAGCGGTG GGCACCGCTCGGAGTTGACGAAGACTTGTGTTTTCCGCCCCAACATTTAC GAGTTTCCTATCGGCGGCATTAGGACGTTTCCTGCTGTGCGGCAATGCTG TGCAAAGCGCAGAGTTCGTTGGCGACCACACCCTTCCAACACCTCAAGAG CCAAGGCCAAAAGAGCTCTAACGACAAAAAGCTGGATGTGGCCACTCGGA GGTGGTTTCGTCTCGTCTCGTTTCGTTCCGTACCGTTTCGTTCGTCCGTT CCGTTTCATTTCGTTCCGTTCCGTTCCGTTCCGCTTCGTTCTGTCCCGTT TCGTTTCAATTTCGTTCCGTATTGTCTCGTTTCGCCTTTGTTATTTTTTC GTAGTATCGTTCCGACTAACGAGTTTAGCTTGTCACTTGTGCAGGCGGCG AACGAGAGCTCTCAGTCCTTACCCATGGGAGCGTTGGCGCACCACCTGTA CTCTCTGCTTTGCGACCAAGGGTAAGTGCTACGAGTACAATACTACAGTC AGTAATGCAAGCATGCAAATATAAGTGTATTCTGATCATGTTCAGTGAAT ATCCCTGCCATGGTCCGTTTTTTGTCCCTCTTAGTAGCAGCATGCCGCGA AACTCGTCGCACAACCCTATTAGCGGTACGACCGTGCACCTACGAGGAAG TGGTGCGGTATTCGTAAAACATCAAATTTAGGTTGTTTCGAGATAGGAAG AACTGCTTTGCATCGATTCAAACACATCATGGTCAATCGCAACCGTCGTC ACTGACTCATGACATGTATCGTCATCGCCCCCACCACCATGATCATTGCC ATGATCACCATCGTCATATATATCCGTCAGCACAACCAACACCGTACTGG CCAACATCATCATCGTCATCGATATTATCGCAGTAGTCGTCATCAGCATC AGCCTCACCGTGTTCTTCTCTTTTCATGTCGTGTGTTGGACATCACAGAT TGGATAGGATGGAGCATTCAGAGGGCACATGCCTCGAGTGATATACATGC TACACTAATACAGGGGACCCTAGTAAATAGGACCTACCGTACATTCCAAA ACCTATACGTTTACCTATTTTTACTAACAATATTGGTCCTATTTATTTTT TATGGTCCCCCGTAAAAACTCCGCACCCAAGTAACAATATACCCATACTT ATGTATATAGCATACGTACGTTTCGCACAAAGCTATATTGCTTCCTCTTT TCTCAATACTGTTCGCCCAAAGCATGCTTTTTTTCTCCTTTGTTAACCTT GTCCTGTACGTTCGGCGGTTCGGCAGGAGCGCCGGCAAAGATTTTTCGGG AATTTACGAATTGATATCCACGAGATCGGAAAGTGGCGGACTATCGGACT CGTCAAAGCCATCAAGATCACCAACATCAAAATCACCAAAGCCACAGTCA CCAGAGTCAGCACAGTCATCAACACCATCATAGCCATCACAATCACGAAG GGAGGGGGGCTAAACGGTGCCCACTGGTACTAACAGGGTGGGAAAACTCA ACGAAAAGTATGAGAGGAGACAACGAGTTCACCAATGAAGCGCACTGCAA TTCCGCTACAGCAGTAAGATCGATGCTGGCGTTGCTGGTTTTTATGCGTT TGTTTATGGACCTGTACCTGCATATACGGAAGTACGGAAGTACTACATTT AAGTCAAGTTGTATGCAACGGTAGTTAGTGGGTAGTATGGTACCAATGGC GACGCCTTGAAGCGAGCACACGCAGGGAATGAGTAGGGGTTGAGTGAGAG TGGTGTTGTGTTTTGTCAGATTTCCAAAGGTCGTCAGAGTACCAGTACCT CCGAGTACCAGTCATTTCAGCTTTCAGTACGCTAGGGACTCGCGAAGGCA CAGATTAGGGGACACAAGAAAAGTGCTCAAAACCTACCGTAGTACTTCAA GAGGCGTGTTTCATTGTACAAATATTTACGTTGATATTCGAGTCACGGGC TTCCAAGTCAAGTATCCTTTTATGTTATTAATAGTGTTGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1291:694..11083-

>mRNA_M-pyrifera_M_contig1291.5781.1 ID=mRNA_M-pyrifera_M_contig1291.5781.1|Name=mRNA_M-pyrifera_M_contig1291.5781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2166bp|location=Sequence derived from alignment at M-pyrifera_M_contig1291:694..11083- (Macrocystis pyrifera P11B4 male)
ATGGCCACTAGCTTGGTCAGAGGCGGACACGACGTCGTGCTTTTCGATGA
TGGCCACTAGCTTGGTCAGAGGCGGACACGACGTCGTGCTTTTCGATGCT
AATCGATCGAAGGCCACTGAGCTGGCGGCTGAAACAGGTGCCAGCTTGGC
CTCCTCCCTCCGAGAACTCGCGCAGAAGAGCTCCTCCATCATCACCATGT
TGCCGAACACCCCAAATGTTGAAGCCGTTTACCTTGGAAACCCCTCCTGC
TCCCGGACGGGGAATTCAACGGATGTATCACCGTCCCGTGAGAAGACCGT
CGAGGAGACCGTTCAGGAGACCGTTCAGGAGACCGTTCAGGGAGGCGGTG
TTTATATGGGGGGTGGGGGAGGAGAAGGTATTTTGGACTGGGTCCGACCG
GGAAGTCTTGTGATTGACAGCAGCACGATTGATCCGCTTGCTTCTCGAAG
AATCAACGCCATCGCCAAGGAAAAGCTAATCGATCGAAGGCCACTGAGCT
GGCGGCTGAAACAGGTGCCAGCTTGGCCTCCTCCCTCCGAGAACTCGCGC
AGAAGAGCTCCTCCATCATCACCATGTTGCCGAACACCCCAAATGTTGAA
GCCGTTTACCTTGGAAACCCCTCCTGCTCCCGGACGGGGAATTCAACGGA
TGTATCACCGTCCCGTGAGAAGACCGTCGAGGAGACCGTTCAGGAGACCG
TTCAGGAGACCGTTCAGGGAGGCGGTGTTTATATGGGGGGTGGGGGAGGA
GAAGGTATTTTGGACTGGGTCCGACCGGGAAGTCTTGTGATTGACAGCAG
CACGATTGATCCGCTTGCTTCTCGAAGAATCAACGCCATCGCCAAGGAAA
AGGGGATTGCTATGCTTGACGCTCCAGTCAGCGGAGGAGTTCCCGGCGCT
GAAAACGCCACTCTTACGTTCATCGTAGGCGGGACTGAAGAGGGGATGGA
TCGCGCCCGTCCCCTTTTGATGTCCATGGGGGCTCAGGCTGTACATTGCG
GGGAGGCCGGCACCGGGTGTGTTGCAAAGGGGATTGCTATGCTTGACGCT
CCAGTCAGCGGAGGAGTTCCCGGCGCTGAAAACGCCACTCTTACGTTCAT
CGTAGGCGGGACTGAAGAGGGGATGGATCGCGCCCGTCCCCTTTTGATGT
CCATGGGGGCTCAGGCTGTACATTGCGGGGAGGCCGGCACCGGGTGTGTT
GCAAAGGTCTGCAACAACCTGAGCCTGGCGATTTCCATGATTGGAGTGTC
GGAAGCCATGAGTTTGGGCTCCAAAATGGGAATGGATCCAACGGTCTGCA
ACAACCTGAGCCTGGCGATTTCCATGATTGGAGTGTCGGAAGCCATGAGT
TTGGGCTCCAAAATGGGAATGGATCCAACGGTACTGGCGAGTGTTCTGAA
CGCATCGACCGCACGCTGCTGGGCCTCCGACACTTACAACCCCTGCCCTG
GGGTGATGGAGGGCGTGCCCTCGTCCAAGGGTTTCCAGGGAGGGTTTGCG
GCGTCTTTGATGCAGAAAGATCTGCATCTCGCTTTGCAGGTACTGGCGAG
TGTTCTGAACGCATCGACCGCACGCTGCTGGGCCTCCGACACTTACAACC
CCTGCCCTGGGGTGATGGAGGGCGTGCCCTCGTCCAAGGGTTTCCAGGGA
GGGTTTGCGGCGTCTTTGATGCAGAAAGATCTGCATCTCGCTTTGCAGGC
GGCGAACGAGAGCTCTCAGTCCTTACCCATGGGAGCGTTGGCGCACCACC
TGTACTCTCTGCTTTGCGACCAAGGGCGGCGAACGAGAGCTCTCAGTCCT
TACCCATGGGAGCGTTGGCGCACCACCTGTACTCTCTGCTTTGCGACCAA
GGGAGCGCCGGCAAAGATTTTTCGGGAATTTACGAATTGATATCCACGAG
ATCGGAAAGTGGCGGACTATCGGACTCGTCAAAGCCATCAAGATCACCAA
CATCAAAATCACCAAAGCCACAGTCACCAGAGTCAGCACAGTCATCAACA
CCATCATAGGAGCGCCGGCAAAGATTTTTCGGGAATTTACGAATTGATAT
CCACGAGATCGGAAAGTGGCGGACTATCGGACTCGTCAAAGCCATCAAGA
TCACCAACATCAAAATCACCAAAGCCACAGTCACCAGAGTCAGCACAGTC
ATCAACACCATCATAG
back to top