mRNA_M-pyrifera_M_contig12892.5775.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12892.5775.1
Unique NamemRNA_M-pyrifera_M_contig12892.5775.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: D7FUE9_ECTSI (Alkylglycerone-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE9_ECTSI)

HSP 1 Score: 583 bits (1503), Expect = 1.430e-179
Identity = 403/722 (55.82%), Postives = 448/722 (62.05%), Query Frame = 1
Query:  541 AVVFLTGVTGLVGQMVLFDLLRQGEAVFRASRGDSGGXXXXXXXXX---GQAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLGPHPAPIIPVDVVSRAVVHSALGWGGPLFAAXXXXXXXXXXXXXXXXXXXXXXAVASPGYPDVVIRNLAWATHPV------SSHCRRRRAVGVGSDDGDDGNDGDYQTRGGGERRGXXXXXXXAGRIRGQAGXXXXXXXXXXXXXXXGRMPSFRELSGLLYDYAVLRGLRPSLEALAMRASFFAASISPCPPQARTPPPHLQQPQTP------------LRWQRGTPAGIVSSDGGGGVGDFDQRGGRVSSAS-----RQPWGXXXXXXXXWGLRPRV----FEALHVLLDRSPVWAIQGIAIPADRLR----SRWRRSGGSG 2604
            AVVFLTGVTGLVGQMVLFDLLRQG A    + GD G             G  AS GLR VVVLVRGKKG+A SDRLA+IRDS MFRPLR SGAWVDE+          P     S ++   P K+   GA VIAVEGELG EGLGLSAESRALL+ AGVTH+LHCAASVSFSDPLAEA ATNVTGALRVAALVASWPSCGTL+HVSTAFVHG  +GTA  PLPQEL DLGGR+PERLYRSA R   A   GXXXXXXX       G EA DA+ADLGYPNTYTFTKALGEHLLVRAL  HN ++D++ A A   +  E           XXXXXXXXXXXXXXX      C LRLRVVRPSIVGP+WVFPWPGWTG+QPSTVTGC VL+LQR VKTFRLGPHPAPIIPVDVVSRA+VHSALGWGGPL ++                      + A+   PDVVIRNLAWATHPV       +   R+R   V                       XX     AGR   + G               GRMPSFRE+SGLLYDYAVLRG+RPSLEALAMR+SF AAS+S          P    P TP            L   R  P         GG G+  QRG   ++       R+  G         GLRP +    F+A+H+LLDRSPVWA+QG+A  A+R+     S   R GGSG
Sbjct:   31 AVVFLTGVTGLVGQMVLFDLLRQGAAASSGASGDDGEAREGLGGGEDGLGGVASGGLRAVVVLVRGKKGVAPSDRLASIRDSAMFRPLRESGAWVDEETDTPSAARASPLPCPPSREALGLPPKKRQ-GAVVIAVEGELGGEGLGLSAESRALLAGAGVTHALHCAASVSFSDPLAEAAATNVTGALRVAALVASWPSCGTLIHVSTAFVHGGKSGTASCPLPQELPDLGGRSPERLYRSAQRAPSASDAGXXXXXXX-----XAGKEALDAMADLGYPNTYTFTKALGEHLLVRALSAHNRRLDRSAAAAAAADVEESGDDEAGGRLAXXXXXXXXXXXXXXXEP----CRLRLRVVRPSIVGPAWVFPWPGWTGEQPSTVTGCQVLVLQRAVKTFRLGPHPAPIIPVDVVSRAIVHSALGWGGPLASSSPAAATGNIMAAIPDIPG----SPAAESRPDVVIRNLAWATHPVLGLGGSGAIVARKRDTTVXXXXX--------------XXXXXXMAAVVAGRTAERKGAVGSGAGE-------GRMPSFREISGLLYDYAVLRGMRPSLEALAMRSSFAAASVSS---------PAATAPGTPCVAGGGDTSGGGLSSSRSRPQSPYPPSPSGGSGE-GQRGNPPTAGDGGFQGRREAGLLLLRGG--GLRPSLPRLAFDAMHLLLDRSPVWALQGLAALAERVGVFGGSSGYRHGGSG 705          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A6H5KJJ4_9PHAE (Fatty acyl-CoA reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ4_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 2.900e-154
Identity = 312/557 (56.01%), Postives = 345/557 (61.94%), Query Frame = 1
Query:   37 LAGVAAGCLWCAVRVARWREEIFAGSPLASEALFRAAALGGDKDD---HPQDAAALDNAEEHYPEVSXXXXXXXXXXXXXXXXXXXAAKICPKKPGAHPGGLKDGAVFDDPVGNIFRPGTRASRDFCAPPSMAGDDGNIFSGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVFLTGVTGLVGQMVLFDLLRQGEAVFRASRG----DSGGXXXXXXXXXGQAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPR-CHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTG 1683
            LA V A CLWCAVRVARWREEIFA SP+  EAL RAAA+          P   A  D+ ++                           ++  + P A      +  V DDPVG +FRPGTRASRDFCAP  M     ++  G                             AVVFLTGVTGLVGQMVLFDLLRQG AV          ++G          G  AS GLR VVVLVRGKKG+A SDRLA+IRDS MFRPLR SGAWVDE+          P     S ++   P K+   GA VIAVEGELG EGLGLSAESRALL+ AGVTH+LHCAASVSFSDPLAEA ATNVTGALRVAALVASWPSCGTL+HVSTAFVHG  +GTA  PLPQEL DLGGR+PERLYRSA R   A   G XXXXXX       G EA DA+ADLGYPNTYTFTKALGEHLLVRAL  HN ++D+  A A   +  EGXXXXXXX                    GSP+ C LRLRVVRPSIVGP+WVFPWPGWTG+QPSTVTG
Sbjct:   90 LAAVGAACLWCAVRVARWREEIFAQSPVVPEALSRAAAVAAAAAGVPLGPGGRAGRDSGDD-------------------------CGRMAEELPPA------EACVDDDPVGCLFRPGTRASRDFCAPRLMPDASSSVRGGC-----------HSVNGGSTATAAAEGSGAVVFLTGVTGLVGQMVLFDLLRQGAAVSSGGPSCDDDEAGEALGGGKAGLGGVASEGLRSVVVLVRGKKGVAPSDRLASIRDSAMFRPLRESGAWVDEETDTPSAERASPLPFPPSREALGLPPKKR-RGAVVIAVEGELGGEGLGLSAESRALLTGAGVTHALHCAASVSFSDPLAEAAATNVTGALRVAALVASWPSCGTLIHVSTAFVHGGKSGTASCPLPQELPDLGGRSPERLYRSAQRTPSAPDAGGXXXXXX-----XXGKEAVDAMADLGYPNTYTFTKALGEHLLVRALSAHNRRLDRLAAAAAASDVEEGXXXXXXXRLAAGGRGLTSGDSR-----GSPKPCRLRLRVVRPSIVGPAWVFPWPGWTGEQPSTVTG 593          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A6H5KHQ5_9PHAE (FAD-binding PCMH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ5_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.220e-45
Identity = 144/331 (43.50%), Postives = 167/331 (50.45%), Query Frame = 1
Query: 1678 TGCLVLLLQRTVKTFRLGPHPAPIIPVDVVSRAVVHSALGWGGPLFAAXXXXXXXXXXXXXXXXXXXXXXAVASPGYPDVVIRNLAWATHPVSSHCRRRRAVGVGSDDGDDGNDGDYQTRGGG-ERRGXXXXXXXAGRIRGQAGXXXXXXXXXXXXXXXGRMPSFRELSGLLYDYAVLRGLRPSLEALAMRASFFAASISPCPPQARTPP--PHLQQ---------------PQTPLRW---------QRGTP--AGIVSSDGGGGVGDFDQRGGRVSSASRQPWGXXXXXXXXWGLRPRV----FEALHVLLDRSPVWAIQGIAIPADRL 2571
            TGC VL+LQR VKTFRLGPHPAPIIPVDVVSRA+VHSALGWGGPL ++                      A  S   PDVVIRNLAWATHPV         +G+G          D    GGG  + G       AGR                     GRMPSFRE+SGLLYDYAVLRG+RPSLEALAMR+SF AAS+SP P    TPP  P +                 PQ+P            +RG P  AG     G G  G    RGG                    GL+P +    F+A+H+LLDRSPVWA+QG+A  A+R+
Sbjct:    5 TGCQVLVLQRAVKTFRLGPHPAPIIPVDVVSRAIVHSALGWGGPLTSSSPAAAAAAANIMAAIPDIPGSPAAES--RPDVVIRNLAWATHPV---------LGLGDSSAIVARKRDPAVCGGGVAQEGGGMADVVAGRAA-------ECTAAVGSGAREGRMPSFREISGLLYDYAVLRGMRPSLEALAMRSSFAAASVSPPP---ATPPGTPCVAHSGDTSGGRWSSSPSCPQSPYXXXXXGGSGEGRRGNPPTAGDGGLQGRGEAGLLHLRGG--------------------GLKPSLPRLAFDAMHLLLDRSPVWALQGLAALAERV 294          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A2K8DNW9_PROMN (Fatty acyl-CoA reductase (Fragment) n=1 Tax=Prorocentrum minimum TaxID=39449 RepID=A0A2K8DNW9_PROMN)

HSP 1 Score: 136 bits (342), Expect = 3.850e-29
Identity = 106/379 (27.97%), Postives = 156/379 (41.16%), Query Frame = 1
Query:  682 QAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLGPHPAPIIPVDVVS----RAVVHSALGWGG 1806
            QA   G+ R+V+L+R K G   + RLA +R +  F+ ++                                          V  +EG+   +  G S  +   +    +   LHCAA V F  PL +A  + ++ +L+VA L   W      + VSTAFVH     T+   L + L +L   +P  LYR A                        G  AG A+ DLG+PNTYTF KA+ EHL+++A G                                                      ++  +VRPSIV P+W  P+ GW+GD+PST+    +LLL+R ++ FR   HP P++PVDVV+    +A+V SA   GG
Sbjct:   66 QAEELGVTRIVLLLRRKDGQTVAGRLAQLRANVAFQEVQEQ------------------------------------FDRLVTVIEGDTSQKNFGQSDAAGPWVQREPLRVVLHCAADVRFDQPLQQAALSLISASLQVALLAKRW-GASRFLFVSTAFVHAVPAATSA--LQERLVELRDFDPMELYRDA---------------------VSHGKWAGKAMRDLGFPNTYTFAKAVAEHLILQACGTEG---------------------------------------------------MQAHIVRPSIVTPAWASPYAGWSGDKPSTIVAAQLLLLKRCLRIFRCSAHPCPLVPVDVVACAAIQALVASAPAAGG 333          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A7S4VSF5_9DINO (Alkylglycerone-phosphate synthase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VSF5_9DINO)

HSP 1 Score: 133 bits (335), Expect = 5.780e-28
Identity = 106/375 (28.27%), Postives = 148/375 (39.47%), Query Frame = 1
Query:  682 QAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLGPHPAPIIPVDVVSRAVVHSALGWGG 1806
            +A   G+ RV +L+R K G +A+ R A +R +P F  +                                      V    V+ +EG+      G     R    E  +   LHCA  V F  PL +A  + V+G L+VA L   W +    V VSTAFVH   +      L + L DL   +P  LYR A                        G  A  A+ +LG+PNTYTF KA+ EHL+++A   +                                                    L  R+VRPSIVGP+W  P+ GW GD+PST+     LL  R V+ FR   HP P++PVD+V+   + + +G GG
Sbjct:  360 RAEELGVTRVALLIRKKAGSSAAARWAELRSNPAFEEVAE------------------------------------VFDRLVVPLEGDAAQMDFGWEDPQRPWPYEEPLRVVLHCAGDVRFEQPLQQAAVSLVSGTLQVAQLAVRWEA-RRFVAVSTAFVHAVPSADGC--LVERLVDLRDFDPLELYRDA---------------------VNHGGWAEKAMRELGFPNTYTFAKAIAEHLVLQACATNG---------------------------------------------------LDARIVRPSIVGPAWAAPFAGWCGDRPSTIVAGAALLSGRAVRLFRCSEHPCPLVPVDMVAETALKAMVGSGG 623          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: K0SMF7_THAOC (Alkylglycerone-phosphate synthase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SMF7_THAOC)

HSP 1 Score: 132 bits (331), Expect = 1.880e-27
Identity = 115/420 (27.38%), Postives = 174/420 (41.43%), Query Frame = 1
Query:  547 VFLTGVTGLVGQMVLFDLLRQGEAVFRASRGDSGGXXXXXXXXXGQAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLS-AESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNE--AGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLGPHPAPIIPVDVVSRAVVHSALG 1797
            V LTGVTG +G ++L ++L   + +   S                          VV+VR K+G +A  R+  +    MF       +++ ED                         K+++    VI VEG++     G++ A   + +  + ++H LHCAA+VSFS PL +A  +N+T +L V +L     +  T  ++STAFVHG  TGT  RPLP+ +  L   +P++LY S                       M G++  A  A+ DLG+PNTYTF+K + EHLL     V                                                         ++RPSIVGPS   P+ GW G++PST+     L L+     +  G  P P +PVDVV R ++  + G
Sbjct:  817 VMLTGVTGFIGSLLLREILLHRDELSIGS-------------------------AVVIVRPKRGRSAIQRVERLLSQAMF-------SFLSED------------------------EKKSL----VIVVEGDVTQPYCGITPAVIESSIQVSKISHVLHCAAAVSFSQPLEDAATSNITSSLNVQSLAKQLDAKFT--YLSTAFVHGDRTGTKSRPLPEAVFSLKPYDPDKLYES-----------------------MLGSQSYASAAMNDLGFPNTYTFSKCVCEHLLEMERDVETT------------------------------------------------------IIRPSIVGPSVEEPYEGWAGERPSTIVAAACLYLKFPYNMWCFGHKPVPFVPVDVVCRVIISKSFG 1097          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A7S2KA40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KA40_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.860e-26
Identity = 112/414 (27.05%), Postives = 165/414 (39.86%), Query Frame = 1
Query:  544 VVFLTGVTGLVGQMVLFDLLRQGEAVFRASRGDSGGXXXXXXXXXGQAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGT-LVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLGPHPAPIIPVDVVSRAVV 1782
            +  L+G TG +G ++L +LL       R +    GG                   VV+LVR KKG+++ +R+  I  + MF                         D + +T   +           V  VE ++ +   G+ +     + E  ++H  HCAA+VSFS PL EA  +N+T +L++  L  S  +     VHVSTAFVHG  TGT   PLP+ L  L   +P  +Y+S                          + A  A+ DL +PNTYTF+K + EHLL R                                                        H+   ++RPSIVGP+   P+ GW+G++PSTV     L L+     +  G    P IPVDVV R ++
Sbjct:   89 MAILSGSTGFIGSLLLRNLLLN-----RKTLSLDGG-------------------VVLLVRSKKGVSSHERVKRILSNSMF-------------------------DFLSATDKESL----------VHVVEADVTLPNCGMESSLILSIRERNISHVFHCAAAVSFSQPLEEAALSNITSSLQMQLLTKSLRNGDAKFVHVSTAFVHGGETGTKDAPLPESLYSLDPYDPVEIYKSM---------------------LATQSYASAAMKDLRFPNTYTFSKCVCEHLLQREQ------------------------------------------------------HVDTIIIRPSIVGPAACEPFEGWSGERPSTVVAAACLYLKFPYIMWSFGKEKVPFIPVDVVCRYII 368          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A813A1C6_9DINO (Agps protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A1C6_9DINO)

HSP 1 Score: 119 bits (299), Expect = 1.280e-23
Identity = 98/373 (26.27%), Postives = 154/373 (41.29%), Query Frame = 1
Query:  682 QAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLG-PHPAPIIPVDVVSRAVVHSALG 1797
            +A   G+ ++V++VR + G + ++RL  +RD  MF  +R +                                        V+ +EG+      G +    +      +   LHCA  V F  P+ +A  + ++  L++  L + W +    + VSTAFVH +    +   L + L +L   +   LYR A                        G  A  A+ +LG+PNTYTF KA+ EHL++RA    +E +D                                                 +R+VRPSIVGP+W +P+ GW GD+PST+ G   LL +R V+ FR    HP P++PVD+V+   V +ALG
Sbjct:  572 RAEELGITKIVLMVRQRSGKSLAERLQKLRDHTMFDEVRET------------------------------------FDKLVVGLEGDTSQRNFGWTEAQPSWPHRESLKAVLHCAGDVRFQQPMQQAAVSLISATLQMQQLASQWKA-KRFLFVSTAFVH-AVPPPSTEALQERLVELRDFDAMELYRDA---------------------MSHGGWAQTAMRELGFPNTYTFCKAVAEHLVIRACD--SEGLD-------------------------------------------------VRIVRPSIVGPAWAYPFIGWAGDKPSTIVGAGTLLAKRGVRAFRDAFDHPCPVVPVDMVADISV-TALG 833          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A812HR99_9DINO (Ads-1 protein (Fragment) n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812HR99_9DINO)

HSP 1 Score: 117 bits (292), Expect = 8.340e-23
Identity = 101/373 (27.08%), Postives = 154/373 (41.29%), Query Frame = 1
Query:  682 QAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLG-PHPAPIIPVDVVSRAVVHSALG 1797
            +A   G+ ++V+LVR + G   ++RL  +RD  MF  +R                  G  D                    V+ +EG+      G +  + +   +  +   LHCA  V F  P+ +A  + ++  L++  L + W +    + VSTAFVH +    +   L + L +L   +   LYR A                        G  A  A+ +LG+PNTYTF KA+ EHL++RA    +E +D                                                 +R+VRPSIVGP+W  P+ GW GD+PST+ G   LL +R V+ FR    HP P++PVD+V+   V  ALG
Sbjct:  580 RAEELGVTKIVLLVRQRSGKTLAERLQKLRDHTMFDEVR------------------GAFDKF------------------VVGLEGDTSRRNFGWTEPNLSWPHKEPLKAVLHCAGDVRFQQPMQQAAVSLISATLQMQQLASQWKA-KRFLFVSTAFVH-AVPPPSTEALQERLVELRDFDAMELYRDA---------------------MSHGAWAQTAMLELGFPNTYTFCKAVAEHLVIRACD--SEGLD-------------------------------------------------VRIVRPSIVGPAWACPFIGWAGDKPSTIVGAGTLLARRGVRVFRDAFDHPCPVVPVDMVADITV-KALG 841          
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Match: A0A812KV89_9DINO (Ads-1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812KV89_9DINO)

HSP 1 Score: 116 bits (290), Expect = 1.360e-22
Identity = 97/373 (26.01%), Postives = 153/373 (41.02%), Query Frame = 1
Query:  682 QAASRGLRRVVVLVRGKKGIAASDRLATIRDSPMFRPLRASGAWVDEDXXXXXXXELGPEDAIGSTKSRNCPNKRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSDPLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLPQELADLGGRNPERLYRSANRGIGARGGGXXXXXXXXXRGSMPGNEAGDAIADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPRCHLRLRVVRPSIVGPSWVFPWPGWTGDQPSTVTGCLVLLLQRTVKTFRLG-PHPAPIIPVDVVSRAVVHSALG 1797
            +A   G+ ++V++VR + G + ++R+  +RD  MF  +R +                                        V+ +EG+      G +        +  +   LHCA  V F  P+ +A  + ++  L++  L + W +    + VSTAFVH +    +   L + L +L   +   LYR A                        G  A  A+ +LG+PNTYTF KA+ EHL++RA    +E +D                                                 +R+VRPSIVGP+W +P+ GW GD+PST+ G   LL +R V+ FR    HP P++PVD+V+   V  ALG
Sbjct:  580 RAEELGITKIVLMVRQRSGKSLAERIKKLRDHIMFDEVREA------------------------------------FDKLVVGLEGDTSQRNFGWTEAQPLWPHKECLKAVLHCAGDVRFQQPMQQAAVSLISATLQMQQLASQWKA-KRFLFVSTAFVH-AVPPPSTEALQERLVELRDFDAMELYRDA---------------------MSHGGWAQTAMRELGFPNTYTFCKAVAEHLVIRACD--SEGLD-------------------------------------------------VRIVRPSIVGPAWAYPFIGWAGDKPSTIVGAGTLLAKRGVRAFRDAFDHPCPVVPVDMVADISV-KALG 841          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12892.5775.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUE9_ECTSI1.430e-17955.82Alkylglycerone-phosphate synthase n=1 Tax=Ectocarp... [more]
A0A6H5KJJ4_9PHAE2.900e-15456.01Fatty acyl-CoA reductase n=1 Tax=Ectocarpus sp. CC... [more]
A0A6H5KHQ5_9PHAE1.220e-4543.50FAD-binding PCMH-type domain-containing protein n=... [more]
A0A2K8DNW9_PROMN3.850e-2927.97Fatty acyl-CoA reductase (Fragment) n=1 Tax=Proroc... [more]
A0A7S4VSF5_9DINO5.780e-2828.27Alkylglycerone-phosphate synthase n=1 Tax=Alexandr... [more]
K0SMF7_THAOC1.880e-2727.38Alkylglycerone-phosphate synthase n=1 Tax=Thalassi... [more]
A0A7S2KA40_9STRA2.860e-2627.05Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A813A1C6_9DINO1.280e-2326.27Agps protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A812HR99_9DINO8.340e-2327.08Ads-1 protein (Fragment) n=1 Tax=Symbiodinium nata... [more]
A0A812KV89_9DINO1.360e-2226.01Ads-1 protein n=3 Tax=Symbiodinium TaxID=2949 RepI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12892contigM-pyrifera_M_contig12892:53..6900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score592.4
Seed ortholog evalue3.4e-166
Seed eggNOG ortholog2880.D7FUE9
Preferred nameAGPS
KEGG rclassRC00004,RC00020,RC02886
KEGG koko:K00803,ko:K13356
KEGG ReactionR04311,R09470
KEGG Pathwayko00073,ko00565,ko01100,ko04146,ko04212,map00073,map00565,map01100,map04146,map04212
Hectar predicted targeting categorysignal peptide
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005782,GO:0005829,GO:0006605,GO:0006625,GO:0006629,GO:0006662,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0008609,GO:0008610,GO:0008611,GO:0009058,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016740,GO:0016765,GO:0018904,GO:0031090,GO:0031903,GO:0031907,GO:0031974,GO:0031981,GO:0033036,GO:0033365,GO:0034613,GO:0036094,GO:0042579,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043574,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046485,GO:0046504,GO:0046907,GO:0048037,GO:0050660,GO:0050662,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071949,GO:0072594,GO:0072662,GO:0072663,GO:0097159,GO:0097384,GO:0098588,GO:0098805,GO:1901265,GO:1901363,GO:1901503,GO:1901576
EggNOG free text desc.alkylglycerone-phosphate synthase activity
EggNOG OGsCOG0277@1,COG3320@1,KOG1221@2759,KOG1233@2759
EC1.2.1.84,2.5.1.26
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size2646
Cds size2646
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815800.8022757-CDS-M-pyrifera_M_contig12892:52..7971622815800.8022757-CDS-M-pyrifera_M_contig12892:52..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 53..797 -
1692277575.5732903-CDS-M-pyrifera_M_contig12892:52..7971692277575.5732903-CDS-M-pyrifera_M_contig12892:52..797Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 53..797 -
1622815800.8200612-CDS-M-pyrifera_M_contig12892:1004..12241622815800.8200612-CDS-M-pyrifera_M_contig12892:1004..1224Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 1005..1224 -
1692277575.5986834-CDS-M-pyrifera_M_contig12892:1004..12241692277575.5986834-CDS-M-pyrifera_M_contig12892:1004..1224Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 1005..1224 -
1622815800.8434043-CDS-M-pyrifera_M_contig12892:2423..28481622815800.8434043-CDS-M-pyrifera_M_contig12892:2423..2848Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 2424..2848 -
1692277575.6074991-CDS-M-pyrifera_M_contig12892:2423..28481692277575.6074991-CDS-M-pyrifera_M_contig12892:2423..2848Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 2424..2848 -
1622815800.8594089-CDS-M-pyrifera_M_contig12892:2893..30191622815800.8594089-CDS-M-pyrifera_M_contig12892:2893..3019Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 2894..3019 -
1692277575.615596-CDS-M-pyrifera_M_contig12892:2893..30191692277575.615596-CDS-M-pyrifera_M_contig12892:2893..3019Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 2894..3019 -
1622815800.872204-CDS-M-pyrifera_M_contig12892:5557..58141622815800.872204-CDS-M-pyrifera_M_contig12892:5557..5814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 5558..5814 -
1692277575.6237547-CDS-M-pyrifera_M_contig12892:5557..58141692277575.6237547-CDS-M-pyrifera_M_contig12892:5557..5814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 5558..5814 -
1622815800.8873227-CDS-M-pyrifera_M_contig12892:5922..61541622815800.8873227-CDS-M-pyrifera_M_contig12892:5922..6154Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 5923..6154 -
1692277575.6335883-CDS-M-pyrifera_M_contig12892:5922..61541692277575.6335883-CDS-M-pyrifera_M_contig12892:5922..6154Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 5923..6154 -
1622815800.900729-CDS-M-pyrifera_M_contig12892:6259..69001622815800.900729-CDS-M-pyrifera_M_contig12892:6259..6900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 6260..6900 -
1692277575.6473362-CDS-M-pyrifera_M_contig12892:6259..69001692277575.6473362-CDS-M-pyrifera_M_contig12892:6259..6900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12892 6260..6900 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12892.5775.1prot_M-pyrifera_M_contig12892.5775.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12892 53..6900 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12892.5775.1

>prot_M-pyrifera_M_contig12892.5775.1 ID=prot_M-pyrifera_M_contig12892.5775.1|Name=mRNA_M-pyrifera_M_contig12892.5775.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=882bp
GRLSAVSVLVLALAGVAAGCLWCAVRVARWREEIFAGSPLASEALFRAAA
LGGDKDDHPQDAAALDNAEEHYPEVSSSASGAAMDDGAAVVVGGGAAKIC
PKKPGAHPGGLKDGAVFDDPVGNIFRPGTRASRDFCAPPSMAGDDGNIFS
GVGVGVGVGAGARTGAGVGAGAGVEGGGGGAVVFLTGVTGLVGQMVLFDL
LRQGEAVFRASRGDSGGGGRGGGGGDGQAASRGLRRVVVLVRGKKGIAAS
DRLATIRDSPMFRPLRASGAWVDEDEDEEQEQELGPEDAIGSTKSRNCPN
KRAVLGATVIAVEGELGVEGLGLSAESRALLSEAGVTHSLHCAASVSFSD
PLAEATATNVTGALRVAALVASWPSCGTLVHVSTAFVHGSTTGTALRPLP
QELADLGGRNPERLYRSANRGIGARGGGGGGGGSGGNRGSMPGNEAGDAI
ADLGYPNTYTFTKALGEHLLVRALGVHNEKMDKANAKAVGGERGEGAGGS
AGTGGRDSAAISPAGAAGAGAAAGSPRCHLRLRVVRPSIVGPSWVFPWPG
WTGDQPSTVTGCLVLLLQRTVKTFRLGPHPAPIIPVDVVSRAVVHSALGW
GGPLFAAAATTTAAATTTTAIIPTTAATTAVASPGYPDVVIRNLAWATHP
VSSHCRRRRAVGVGSDDGDDGNDGDYQTRGGGERRGDGGGGGGAGRIRGQ
AGGRGGEEGKGGGEEGEGRMPSFRELSGLLYDYAVLRGLRPSLEALAMRA
SFFAASISPCPPQARTPPPHLQQPQTPLRWQRGTPAGIVSSDGGGGVGDF
DQRGGRVSSASRQPWGWGWGVGGGWGLRPRVFEALHVLLDRSPVWAIQGI
AIPADRLRSRWRRSGGSGHEGGGGGGREGRGG
back to top

mRNA from alignment at M-pyrifera_M_contig12892:53..6900-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12892.5775.1 ID=mRNA_M-pyrifera_M_contig12892.5775.1|Name=mRNA_M-pyrifera_M_contig12892.5775.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6848bp|location=Sequence derived from alignment at M-pyrifera_M_contig12892:53..6900- (Macrocystis pyrifera P11B4 male)
GGCCGTCTCTCGGCGGTCTCCGTGCTCGTCCTGGCGCTGGCGGGGGTAGC CGCCGGATGCCTCTGGTGCGCGGTGCGCGTAGCGCGGTGGCGTGAGGAGA TATTCGCGGGGAGCCCCTTGGCCTCCGAGGCGCTGTTCCGCGCAGCTGCT CTCGGCGGCGACAAGGACGACCACCCGCAGGACGCGGCAGCTCTCGACAA TGCTGAGGAGCATTACCCAGAAGTGAGCTCGTCGGCGTCGGGTGCGGCGA TGGATGATGGGGCTGCGGTAGTGGTGGGGGGTGGAGCCGCGAAGATATGC CCAAAAAAACCGGGAGCTCACCCTGGCGGGCTTAAGGACGGCGCGGTTTT CGACGACCCGGTCGGAAATATTTTCAGGCCTGGCACGCGGGCGTCGCGGG ACTTTTGCGCTCCGCCCTCGATGGCGGGCGATGATGGAAATATTTTTTCG GGGGTAGGGGTGGGAGTCGGGGTCGGGGCGGGGGCCAGGACAGGGGCGGG GGTTGGAGCGGGGGCGGGGGTCGAGGGGGGGGGTGGCGGGGCCGTGGTGT TCTTGACGGGCGTGACAGGTCTTGTCGGGCAGATGGTCCTCTTCGACTTA CTCCGTCAAGGAGAAGCCGTTTTTAGAGCATCCAGGGGCGAGTGTGAGGG TAGGTTTCAGGTGGAAGAGCGGGAGGATCACGTTCGCGCGGGAAACGAAG GCGGCGGTGGCGGCGGTGGCGGTGGTGGTGGCGACGGCGAGGGCAGCAGT GGCGGTGGTGGTCGTGGTGGTGGCGGCGGCGACGGCCAAGCGGCCTCGCG GGGGCTGCGGAGAGTGGTGGTGCTTGTGCGGGGCAAGAAGGGCATAGCCG CTTCAGATCGGCTCGCCACGATAAGGGACAGCCCGATGTTTCGCCCCCTG AGGGCGAGCGGAGCCTGGGTGGACGAAGACGAAGACGAGGAACAAGAACA AGAACTAGGGCCCGAGGACGCGATCGGCGTTACCGCTGGCAGGGCACCGA AGTCAGACGTGTCACGTTCCGCTCCGTTTTCTGGAAGCTTCTGCCGCGGC AGTAGCAGTAGCAGCAGCAGTAACAGCAAAGCCAAGAGCACCAAGAGCCG CAACTGTCCTAACAAGCGAGCGGTGTTGGGGGCGACGGTGATCGCGGTGG AGGGCGAGCTGGGGGTGGAGGGGCTCGGGCTGTCGGCGGAGTCGCGGGCG CTACTGTCCGAGGCAGGGGTGACCCACTCGCTGCACTGCGCCGCGAGCGT GAGCTTTAGCGACCCCCTGGCGGAGGCGACGGCGACGAACGTTACCGGGG CTCTTCGGGTGGCCGCCCTCGTTGCCTCCTGGCCTTCTTGCGGGTGAGAG AGGGAGGGGTACGTGCCAGTAAAATTGCGTAGGGCCAGCGACGGGGGCAG GAGGCCTCGCCCAAACCAATAACTTGCATTTGAATGATCGCTGTCAGCGT AAAATAATACTGCAGGGTATTGGGGTTTTGTGCTTTGAAATAAGGCGGTT TTTTGTTGGGTATTGAACCGCCAGTGCAGGCAGCTTCGACTTGTGCGCTG TGAGAGAGATTATGTGAGCTCTGTACTTTACCGGAACCTCTGCTGCTGCA GCGCTGTCAATATGTACCCCTAGTCCTGATCTATTGGTGTACCTTTTTTG GTCAACGTGTACCCCCCCCCTGTTTACATATGATACTCCGTATGTATTAT GTACTGCAACATCGCTATATACAGTAGTACCAGGTAGCCGCTAGTCTGAC AGCTACGGTATTGCCTTCTGCTCGTGCAGTCTGCTATCTCTGCTCCGAGT TGCGTGCCTCCTTCTCCACGACAATTGTTGTACCGTGTAGCACTCCGGGC GGTAATATAAGAACCACTGATTCATATATATGAAGACCCAACGTTCCTTA TATTTCCGCCCAGAGTGGTACGTATCACACTAGGGTGATAAGATAACACA CGCCCCCCTCGGACGAATTTCCGAGCCGAGTTTCTCCAAAGCATGCCTTA AGGGGCGTGCGCACAACAAAAGTGCTGTTTTTTTGGAAGTGTCTCGTCGA GGTCTTTCCGTAGACGCAATCGCTGGGCGGTTGCACCTTCCCCATGGTCG AGAAAAATCAGCTTCGAAATCCGTTGTGTACGGTAGGCACTGCTTTCGAC CAGGGGGTACGAAAACGCTTTTTTTTTTAAGTTACCGAAAAACACAAAAA TTACCGTGTAATTTCCTTAAGAATACCAGGTATCATTTTTTGGTCGCCAT GTAGCCTCCACTGCCGAGTCGTGCCTAGAATCGTAAAATTAGTTTGCGGG CTGTACCGCCGCGGTTTTTGTGAGTCAAGACGCAAAAATTGGAAGCACCG ACCCGGTGTACGCGCTATTATGCCTTTTTTTTTTCAGAATCCGAGTCGAT GTCGCCGAGATATTAAAAAATGTTCAAAAGTCCCCCATTTTTTGCCGACA TTTTGACAATACATTCGGCATGGCAGGTACAAAAGTCATCGTTCCCGATC AAGGTGGGATTTTTTTTGTAGACGATGCTTAAGACACGAGGAAGCGATCG ATGTTAGTTTCGTAGCTCAAACCGTCACCCGCCGAAATATATGACGAACA AAAAACAAACGATTCCCTTACATTAAACAAGTAGTAGCGAGAACAAACAC TGCCGTGCTGCACTCACTTTTGGCAGTTTCGATCTGAAATTCCAACCCCG TATTGTGGGGCACGTGCAAAATTATTTGGGGTAGGACATAAGAGGGCGGA GGAAAAATAATAAAAAGGGCCAACTCGGAAATTGTTGGATATTGCATAAG CAACACCGTCTCACACGACGTCATAAATTCTATGTCCAAAACCGAACAAT TTCTGAATTCCGTGGGCAGTACACCGTTACGGCAGAGTCTTGGCTGGCCC ATCTTGTAGGTATATATATATATATATTTTTTACAGGTTCCTAACCTGAG AAACTCCAGTAGTTCGTAGCTCTATGCCATTGGTACGTCACCTGAAGGCC GACTTTGAGAAACGTTATGTATACACTTGTTTATAGTATAGGCCCAACCC GATGAATCCTATGGGCCAGGCACCTACTACTGCATAACGCAAAGGGGGCT GCAAAAATATCGCAGATGGAATTGCAAATGTAACAGGAAGTGGGACTGCT AGTCTATCGCAAATGAGACTGCGAGTAACGCAAGTGGGACTGCAAATAAC GCAGGTGGGACTGCAAGTATCGCAAATGAGACTGCAAATACAACGCAAGT CGGACTGCAAGTATGACGCAAATGGGGACTGCAAATAAAACACAAATGGG GATTGCAAATAACGCAAGTGGGACTGCAAGTATCGCAAATGGGGCTGCAA ATACAACGCAAATGGGACTGCAAATAACGCATTTAGGGTAGAGGGTGGGG TGCCTTAATCGAGGAGGGAGTCAGTGAGAACATTTGGATGCCAATAAAGT GCTCCCTGTGCCGTGAGCATGTCTAAGCCACCCTTTCCTGAGATTAGTCT ACTGCTGTGACTTTGTTTCACCCATGCCTCCCACCCCCCCTCTCACAGAT GACGAAGCAGGTGGGGGGTAAGATAGGCAAAACAAATTATATGTAATATA TGGGAAAAACGTATTGTGTGCCCAAATGTTGGAGTCTATGTCCAAATGTT GGAGATGTCTCTATCAGGAGAAGAAACGGTCCTCCGTCTCGAAAGGGATG CGTGGTCAAGGGTCAAATGAGTACGCCCCCCCCCCCGGCGCTTCGCTCTT GGTGCAAGCGATGTCTGCCTGAGCTCCGTCCCGGCATTGTAGGGATGCGA GGGTCTATGGTCATACGACTACGGCAGGCATGATAACGAGTACCCCCCCC CCCCTCATTGCCACCCCCTCCCGCCTTCCAGGACTCTGGTGCATGTCTCG ACCGCGTTTGTCCACGGCAGCACCACGGGAACCGCGCTCCGTCCCCTCCC CCAAGAACTCGCCGACCTTGGTGGTAGAAACCCCGAGCGCCTCTACCGCA GCGCGAAGTGCACTCCGCCAGAACCCACCTCCTTTTTCAGCCGCGGTGGA AGCCGCGGCATTGGCGCCAGAGGTGGTGGAGGCGGTGGTGGTGGTAGCGG CGGCAATCGCGGGTCGATGCCTGGAAACGAAGCGGGCGACGCCATCGCTG ACCTCGGCTACCCCAACACGTACACCTTCACGAAGGCGCTAGGGGAGCAT CTGCTCGTGCGGGCGCTGGGCGTGCACAACGAGAAGATGGACAAGGCTAA CGCTAAGGCTGTGGGGGGCGAGCGGGGTGAGGGGGCAGGGGGGTCGGCGG GAACTGGCGGGCGTGATTCGGCGGCTATCTCTCCGGCTGGTGCTGCTGGG GCTGGGGCTGCTGCTGGTTCTCCTCGCTGTCATCTGAGGTTGCGCGTTGT GCGACCGAGCATCGTCGGACCGTCTTGGGTGTTCCCATGGCCAGGCTGGA CGGGAGATCAACCTTCCACGGTTACAGGTAAGCGGGCAGGGCGGGGGATA TTATCCATCTCTGTCTCTCTTTCTCTCTCTGTTTCTCTTTCTCAAAGCAC CGCAGTGTGCCATGCCATGCTGCTGTACCGTACCGCATAATACCGTACGC GTACCTTACCGCATCGTACTATACCGCGCTGTACCATGCCGGCGTCGTGC CATGCCTTACCGCACGGTATCGTGTACCATACTGCACCGTGCGTACCGCA CCTCACGATATAGTACCATACCGCACCGCATCGTACCATGCCGTACCGTA CCGTGTTATACTGTCCCGCACTACTGCTCGGTACTGTACCGCACGGTAGC TAATATACCATACCGCACCGTACCGAAGCGTGTTTTTGTGACGTCACGTC ACGTAGTGTACACTGTACCGCAGAACACATTCGTAACATGGTGTACCATA CACATACCATGCCGTGTTTCACCGTACCGTACCACATATAGTAGTAACGA AATGCACCGTGATGTACCGTGACTCACCTTAACGTGCGGTCCATAGTAAA AAGGACCTACACGGTACACACAAAAACTTACATATTTTTGTATTTTTACT GAAACAATATTTGGTCCTGTTTACTATGGTCAACGCCCGCGGTGTACTGT ACCAACCCGCATGCCGTAGTAGCGTAGCGCATCGTACAGCACTGTTAATA GGACGTGTTGTACTGTACATTACCACACACTAGGTGCTTGGTAGCACCGT ACCGCATACCCGGTACCGGGTGTGGACCGGGTATATAGCAGCGTTACGTA CCGCCGAGCCGCATTGTATTGTACCTGATCACATAGTACCGTGATGTGCC GTGCTGTACCGCACCATACCGTCCGGCTCACGGCCGGACGGCGTCCCTGG TACCTTTATCCTTCGTAGACCTTGGCGTGCTCACCAACCATAGCGTGCTG CCCACCTCGGCGTCCGGTAAATCTCACGTACGTGCTTTAGTTGATTTTGT TTCTGGTTTTGATGTGTATTTTGTTTCCTGTTTTTCGTTCTTTTTCCTTG AATTTGAGCACCGAGTCGCACTGATTTTTGTTTGTCGTTTTCTGCTTCTT GATTCTTGTTCTTCGTGTTTTGTTTGGTTGATTTTTGTTTTTGTTTTTGT CTCGTGCTTTGTTTACTTGCTATATTTTTGTTTTCGGTGTTTTTGGCGTT TTTTTCCCTGTTATACGCTCTGACAGGCTGCCTGGTGCTGCTCCTCCAAC GAACCGTCAAGACTTTTCGCTTGGGCCCCCACCCCGCCCCGATCATCCCG GTCGATGTCGTCAGCCGAGCGGTCGTCCACAGCGCGCTCGGGTGGGGAGG GCCCTTATTCGCCGCCGCCGCCACCACCACTGCCGCCGCTACCACCACCA CTGCCATCATCCCGACTACCGCCGCCACCACCGCCGTGGCTAGCCCGTTC CCGCTCTTCGCTGAGTCAGAGGGTAAGGGCTTGATGTCGGACGCCCTCAG CGACAACCGCGCTAACGATAAGGGCTTTCGCGGCAGTAGCGGTGGAGGTA GCGGGGGTGGGGGCAGGTGTGGAGGCTGGGATGGCGGTGGGGGCGGGGGC GGGGGCGGCAGCAGTAATAGCGTCGGGAAAAGGTTAGGCGGGGCTGACGC CAGAGGGTACCCGGACGTGGTCATCAGGAATCTGGCCTGGGCGACGCACC CTGTCTCTAGCCACTGCCGCCGCCGCCGCGCTGTGGGGGTTGGAAGTGAT GATGGTGATGATGGCAACGATGGCGACTATCAAACGAGAGGGGGTGGGGA GAGAAGAGGGGATGGAGGTGGGGGAGGGGGAGCAGGACGAATACGAGGAC AAGCAGGAGGAAGAGGAGGGGAAGAAGGAAAGGGGGGGGGAGAAGAAGGG GAAGGTCGCATGCCGTCGTTCCGAGAACTTTCCGGGCTGCTGTACGACTA CGCCGTGCTCAGGGGACTGCGGCCGTCCCTGGAAGCCCTCGCCATGAGGG CTTCCTTCTTTGCTGCGTCGATTTCTCCTTGCCCGCCCCAGGCGCGAACG CCTCCGCCGCACCTGCAACAGCCGCAGACCCCGCTTAGATGGCAACGCGG TACCCCGGCCGGTATCGTCAGCAGTGACGGTGGGGGAGGAGTGGGTGACT TTGATCAGCGAGGGGGTCGGGTGAGCTCTGCGTCGCGGCAGCCGTGGGGG TGGGGGTGGGGAGTCGGTGGGGGGTGGGGGCTCCGGCCCCGAGTGTTCGA GGCCCTGCACGTGTTGCTCGACAGGTCGCCGGTGTGGGCGATCCAGGGGA TCGCTATCCCGGCGGACCGGTTGAGGAGTCGTTGGCGACGTTCCGGCGGG AGTGGCCATGAGGGAGGGGGGGGGGGGGGGAGAGAAGGAAGGGGGGGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig12892:53..6900-

>mRNA_M-pyrifera_M_contig12892.5775.1 ID=mRNA_M-pyrifera_M_contig12892.5775.1|Name=mRNA_M-pyrifera_M_contig12892.5775.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=5292bp|location=Sequence derived from alignment at M-pyrifera_M_contig12892:53..6900- (Macrocystis pyrifera P11B4 male)
GGCCGTCTCTCGGCGGTCTCCGTGCTCGTCCTGGCGCTGGCGGGGGTAGC
CGCCGGATGCCTCTGGTGCGCGGTGCGCGTAGCGCGGTGGCGTGAGGAGA
TATTCGCGGGGAGCCCCTTGGCCTCCGAGGCGCTGTTCCGCGCAGCTGCT
CTCGGCGGCGACAAGGACGACCACCCGCAGGACGCGGCAGCTCTCGACAA
TGCTGAGGAGCATTACCCAGAAGTGAGCTCGTCGGCGTCGGGTGCGGCGA
TGGATGATGGGGCTGCGGTAGTGGTGGGGGGTGGAGCCGCGAAGATATGC
CCAAAAAAACCGGGAGCTCACCCTGGCGGGCTTAAGGACGGCGCGGTTTT
CGACGACCCGGTCGGAAATATTTTCAGGCCTGGCACGCGGGCGTCGCGGG
ACTTTTGCGCTCCGCCCTCGATGGCGGGCGATGATGGAAATATTTTTTCG
GGGGTAGGGGTGGGAGTCGGGGTCGGGGCGGGGGCCAGGACAGGGGCGGG
GGTTGGAGCGGGGGCGGGGGTCGAGGGGGGGGGTGGCGGGGCCGTGGTGT
TCTTGACGGGCGTGACAGGTCTTGTCGGGCAGATGGTCCTCTTCGACTTA
CTCCGTCAAGGAGAAGCCGTTTTTAGAGCATCCAGGGGCGAGGCCGTCTC
TCGGCGGTCTCCGTGCTCGTCCTGGCGCTGGCGGGGGTAGCCGCCGGATG
CCTCTGGTGCGCGGTGCGCGTAGCGCGGTGGCGTGAGGAGATATTCGCGG
GGAGCCCCTTGGCCTCCGAGGCGCTGTTCCGCGCAGCTGCTCTCGGCGGC
GACAAGGACGACCACCCGCAGGACGCGGCAGCTCTCGACAATGCTGAGGA
GCATTACCCAGAAGTGAGCTCGTCGGCGTCGGGTGCGGCGATGGATGATG
GGGCTGCGGTAGTGGTGGGGGGTGGAGCCGCGAAGATATGCCCAAAAAAA
CCGGGAGCTCACCCTGGCGGGCTTAAGGACGGCGCGGTTTTCGACGACCC
GGTCGGAAATATTTTCAGGCCTGGCACGCGGGCGTCGCGGGACTTTTGCG
CTCCGCCCTCGATGGCGGGCGATGATGGAAATATTTTTTCGGGGGTAGGG
GTGGGAGTCGGGGTCGGGGCGGGGGCCAGGACAGGGGCGGGGGTTGGAGC
GGGGGCGGGGGTCGAGGGGGGGGGTGGCGGGGCCGTGGTGTTCTTGACGG
GCGTGACAGGTCTTGTCGGGCAGATGGTCCTCTTCGACTTACTCCGTCAA
GGAGAAGCCGTTTTTAGAGCATCCAGGGGCGACAGTGGCGGTGGTGGTCG
TGGTGGTGGCGGCGGCGACGGCCAAGCGGCCTCGCGGGGGCTGCGGAGAG
TGGTGGTGCTTGTGCGGGGCAAGAAGGGCATAGCCGCTTCAGATCGGCTC
GCCACGATAAGGGACAGCCCGATGTTTCGCCCCCTGAGGGCGAGCGGAGC
CTGGGTGGACGAAGACGAAGACGAGGAACAAGAACAAGAACTAGGGCCCG
AGGACGCGATCGGCCAGTGGCGGTGGTGGTCGTGGTGGTGGCGGCGGCGA
CGGCCAAGCGGCCTCGCGGGGGCTGCGGAGAGTGGTGGTGCTTGTGCGGG
GCAAGAAGGGCATAGCCGCTTCAGATCGGCTCGCCACGATAAGGGACAGC
CCGATGTTTCGCCCCCTGAGGGCGAGCGGAGCCTGGGTGGACGAAGACGA
AGACGAGGAACAAGAACAAGAACTAGGGCCCGAGGACGCGATCGGCAGCA
CCAAGAGCCGCAACTGTCCTAACAAGCGAGCGGTGTTGGGGGCGACGGTG
ATCGCGGTGGAGGGCGAGCTGGGGGTGGAGGGGCTCGGGCTGTCGGCGGA
GTCGCGGGCGCTACTGTCCGAGGCAGGGGTGACCCACTCGCTGCACTGCG
CCGCGAGCGTGAGCTTTAGCGACCCCCTGGCGGAGGCGACGGCGACGAAC
GTTACCGGGGCTCTTCGGGTGGCCGCCCTCGTTGCCTCCTGGCCTTCTTG
CGGAGCACCAAGAGCCGCAACTGTCCTAACAAGCGAGCGGTGTTGGGGGC
GACGGTGATCGCGGTGGAGGGCGAGCTGGGGGTGGAGGGGCTCGGGCTGT
CGGCGGAGTCGCGGGCGCTACTGTCCGAGGCAGGGGTGACCCACTCGCTG
CACTGCGCCGCGAGCGTGAGCTTTAGCGACCCCCTGGCGGAGGCGACGGC
GACGAACGTTACCGGGGCTCTTCGGGTGGCCGCCCTCGTTGCCTCCTGGC
CTTCTTGCGGGACTCTGGTGCATGTCTCGACCGCGTTTGTCCACGGCAGC
ACCACGGGAACCGCGCTCCGTCCCCTCCCCCAAGAACTCGCCGACCTTGG
TGGTAGAAACCCCGAGCGCCTCTACCGCAGCGCGAAGACTCTGGTGCATG
TCTCGACCGCGTTTGTCCACGGCAGCACCACGGGAACCGCGCTCCGTCCC
CTCCCCCAAGAACTCGCCGACCTTGGTGGTAGAAACCCCGAGCGCCTCTA
CCGCAGCGCGAACCGCGGCATTGGCGCCAGAGGTGGTGGAGGCGGTGGTG
GTGGTAGCGGCGGCAATCGCGGGTCGATGCCTGGAAACGAAGCGGGCGAC
GCCATCGCTGACCTCGGCTACCCCAACACGTACACCTTCACGAAGGCGCT
AGGGGAGCATCTGCTCGTGCGGGCGCTGGGCGTGCACAACGAGAAGATGG
ACAAGGCTAACGCTAAGGCTGTGGGGGGCGAGCGGGGTGAGGGGGCAGGG
GGGTCGGCGGGAACTGGCGGGCGTGATTCGGCGGCTATCTCTCCGGCTGG
TGCTGCTGGGGCTGGGGCTGCTGCTGGTTCTCCTCGCTGTCATCTGAGGT
TGCGCGTTGTGCGACCGAGCATCGTCGGACCGTCTTGGGTGTTCCCATGG
CCAGGCTGGACGGGAGATCAACCTTCCACGGTTACAGCCGCGGCATTGGC
GCCAGAGGTGGTGGAGGCGGTGGTGGTGGTAGCGGCGGCAATCGCGGGTC
GATGCCTGGAAACGAAGCGGGCGACGCCATCGCTGACCTCGGCTACCCCA
ACACGTACACCTTCACGAAGGCGCTAGGGGAGCATCTGCTCGTGCGGGCG
CTGGGCGTGCACAACGAGAAGATGGACAAGGCTAACGCTAAGGCTGTGGG
GGGCGAGCGGGGTGAGGGGGCAGGGGGGTCGGCGGGAACTGGCGGGCGTG
ATTCGGCGGCTATCTCTCCGGCTGGTGCTGCTGGGGCTGGGGCTGCTGCT
GGTTCTCCTCGCTGTCATCTGAGGTTGCGCGTTGTGCGACCGAGCATCGT
CGGACCGTCTTGGGTGTTCCCATGGCCAGGCTGGACGGGAGATCAACCTT
CCACGGTTACAGGCTGCCTGGTGCTGCTCCTCCAACGAACCGTCAAGACT
TTTCGCTTGGGCCCCCACCCCGCCCCGATCATCCCGGTCGATGTCGTCAG
CCGAGCGGTCGTCCACAGCGCGCTCGGGTGGGGAGGGCCCTTATTCGCCG
CCGCCGCCACCACCACTGCCGCCGCTACCACCACCACTGCCATCATCCCG
ACTACCGCCGCCACCACCGCCGTGGCTAGCCCGCTGCCTGGTGCTGCTCC
TCCAACGAACCGTCAAGACTTTTCGCTTGGGCCCCCACCCCGCCCCGATC
ATCCCGGTCGATGTCGTCAGCCGAGCGGTCGTCCACAGCGCGCTCGGGTG
GGGAGGGCCCTTATTCGCCGCCGCCGCCACCACCACTGCCGCCGCTACCA
CCACCACTGCCATCATCCCGACTACCGCCGCCACCACCGCCGTGGCTAGC
CCAGGGTACCCGGACGTGGTCATCAGGAATCTGGCCTGGGCGACGCACCC
TGTCTCTAGCCACTGCCGCCGCCGCCGCGCTGTGGGGGTTGGAAGTGATG
ATGGTGATGATGGCAACGATGGCGACTATCAAACGAGAGGGGGTGGGGAG
AGAAGAGGGGATGGAGGTGGGGGAGGGGGAGCAGGACGAATACGAGGACA
AGCAGGAGGAAGAGGAGGGGAAGAAGGAAAGGGGGGGGGAGAAGAAGGGG
AAGGTCGCATGCCGTCGTTCCGAGAACTTTCCGGGCTGCTGTACGACTAC
GCCGTGCTCAGGGGACTGCGGCCGTCCCTGGAAGCCCTCGCCATGAGGGC
TTCCTTCTTTGCTGCGTCGATTTCTCCTTGCCCGCCCCAGGCGCGAACGC
CTCCGCCGCACCTGCAACAGCCGCAGACCCCGCTTAGATGGCAACGCGGT
ACCCCGGCCGGTATCGTCAGCAGTGACGGTGGGGGAGGAGTGGGTGACTT
TGATCAGCGAGGGGGTCGGGTGAGCTCTGCGTCGCGGCAGCCGTGGGGGT
GGGGGTGGGGAGTCGGTGGGGGGTGGGGGCTCCGGCCCCGAGTGTTCGAG
GCCCTGCACGTGTTGCTCGACAGGTCGCCGGTGTGGGCGATCCAGGGGAT
CGCTATCCCGGCGGACCGGTTGAGGAGTCGTTGGCGACGTTCCGGCGGGA
GTGGCCATGAGGGAGGGGGGGGGGGGGGGAGAGAAGGAAGGGGGGGGAGG
GTACCCGGACGTGGTCATCAGGAATCTGGCCTGGGCGACGCACCCTGTCT
CTAGCCACTGCCGCCGCCGCCGCGCTGTGGGGGTTGGAAGTGATGATGGT
GATGATGGCAACGATGGCGACTATCAAACGAGAGGGGGTGGGGAGAGAAG
AGGGGATGGAGGTGGGGGAGGGGGAGCAGGACGAATACGAGGACAAGCAG
GAGGAAGAGGAGGGGAAGAAGGAAAGGGGGGGGGAGAAGAAGGGGAAGGT
CGCATGCCGTCGTTCCGAGAACTTTCCGGGCTGCTGTACGACTACGCCGT
GCTCAGGGGACTGCGGCCGTCCCTGGAAGCCCTCGCCATGAGGGCTTCCT
TCTTTGCTGCGTCGATTTCTCCTTGCCCGCCCCAGGCGCGAACGCCTCCG
CCGCACCTGCAACAGCCGCAGACCCCGCTTAGATGGCAACGCGGTACCCC
GGCCGGTATCGTCAGCAGTGACGGTGGGGGAGGAGTGGGTGACTTTGATC
AGCGAGGGGGTCGGGTGAGCTCTGCGTCGCGGCAGCCGTGGGGGTGGGGG
TGGGGAGTCGGTGGGGGGTGGGGGCTCCGGCCCCGAGTGTTCGAGGCCCT
GCACGTGTTGCTCGACAGGTCGCCGGTGTGGGCGATCCAGGGGATCGCTA
TCCCGGCGGACCGGTTGAGGAGTCGTTGGCGACGTTCCGGCGGGAGTGGC
CATGAGGGAGGGGGGGGGGGGGGGAGAGAAGGAAGGGGGGGG
back to top