mRNA_M-pyrifera_M_contig128681.5762.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A0A2D8CGK2_9BACT (Uncharacterized protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CGK2_9BACT) HSP 1 Score: 130 bits (328), Expect = 2.370e-32 Identity = 69/167 (41.32%), Postives = 109/167 (65.27%), Query Frame = 1
Query: 1 YVGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPFWLEYFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLINIDANTL-MNLYHFNMILFHFFLLYVGYYLWWKTIKNASYY 498
Y GTL+AL K K+D L+ +IG+M+IMI YNLFL AT+D IY+ Y+AY+ + + +TF+N YP +PFWLE +F+W + FF LF T+YLDL+ AP L+ + +++ + LS IP++ L+ + ++ + + Y ++ + LL+ G YL +K KNA +Y
Sbjct: 172 YAGTLAALVKKKEKHDFLTAGYIGLMIIMILYNLFLGLATQDRIYVYYIAYLITMTITITFSNHYPFSNNPFWLENYFLWGSIFHFFASLFSTKYLDLQNQAPYLNISVWVITVFLSFVIPILTLLGVPSHVIAVPYYQIGVVSLYLSLLWSGIYLLFKGHKNARFY 338
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A1ZF76_9BACT (7TM diverse intracellular signalling domain protein n=1 Tax=Microscilla marina ATCC 23134 TaxID=313606 RepID=A1ZF76_9BACT) HSP 1 Score: 101 bits (252), Expect = 6.050e-22 Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = 1
Query: 4 VGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPFWLEYFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLINIDANTLMNLYHFNMILFHFFLLYVGYYLWWKTIKNASYY 498
VGT +L YD + +FIG++L M+ YNLFL +AT D +YL YV+Y+A LV F+NG + ++ + F VW + + + I LF YL+LRQ+A L + + L + L VF PL+ LI I + + ++++ F LL G YLW K KNA +Y
Sbjct: 163 VGTTQSLIKKFDTYDQILNIFIGLVLSMLVYNLFLFFATHDRLYLIYVSYLAMVFLVTPFSNGQAMFFYSWFWDNFLVWQSPLFWTITLFVDLYLNLRQHALQLKRWLWALTVCLGVFFPLLNLIGIHMAYYLRFFQLMVLVYSFSLLICGVYLWRKGHKNARFY 327
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A0A349DXI3_9BACT (PPM-type phosphatase domain-containing protein n=1 Tax=Microscillaceae bacterium TaxID=2053581 RepID=A0A349DXI3_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 2.280e-15 Identity = 54/166 (32.53%), Postives = 93/166 (56.02%), Query Frame = 1
Query: 4 VGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPFWLEYFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLINIDANTLMNL-YHFNMILFHFFLLYVGYYLWWKTIKNASYY 498
+GT AL + D + LFIG++L ++ YNLF+ Y+ +DTIYL Y+ Y+ V TF++GYPL+ + YF+ W+ I LF + YL+L++ +P ++ + +LLS PL + I + + + Y + ++ LL++G +L K +NA +Y
Sbjct: 175 IGTFRALDSYLQVNDYIVTLFIGIILALLIYNLFIYYSARDTIYLVYILYLGWVLFVATFSSGYPLVYKHWLWNYFYSWNGIGYTLITLFASFYLNLKRVSPRFYRWIWFCTILLSAVFPLFNITGILSVVQLAMPYQLVLTTYYLSLLFIGIWLVAKGQRNARFY 340
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A0A1Q3H465_9BACT (PPM-type phosphatase domain-containing protein n=1 Tax=marine bacterium AO1-C TaxID=1905359 RepID=A0A1Q3H465_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 4.220e-15 Identity = 54/166 (32.53%), Postives = 91/166 (54.82%), Query Frame = 1
Query: 4 VGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPFWLEYFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLINIDANTLMNL-YHFNMILFHFFLLYVGYYLWWKTIKNASYY 498
+GT AL D + LFIG++L ++ YNLF+ Y+ +D IYL Y+ Y+ V TF +GY L + +YF+ W+ + F I LF + YL+L++ P ++ + +LLS PL L + + M + Y + +++ LL++G +L K +NA +Y
Sbjct: 175 IGTFRALDKYLQVNDYIVTLFIGVILALLIYNLFIYYSARDIIYLVYILYLGWVLFVATFTSGYALAYKHWLWDYFYSWNGSGYFLITLFASIYLNLKKVTPRFYRWIWFCTILLSAVFPLFNLTGLISVVQMAMPYQLVLTVYYLSLLFIGIWLVVKGHRNARFY 340
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A1ZRX3_9BACT (Sensory transduction histidine kinase n=1 Tax=Microscilla marina ATCC 23134 TaxID=313606 RepID=A1ZRX3_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 4.520e-15 Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1
Query: 4 VGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPFWLEYFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLINIDANTLMNLYHFNMILFHFFLLYVGYYLWWKTIKNASYY 498
+GT +A+T Y+ + FIG+++ M YNLFL +ATKD IYL YV Y+ F NG L ++ YF VW + + + + LF +YLDL NA + + ++L +L PL+ L I L++ +++ F LL G+YL +K + A +Y
Sbjct: 172 IGTTTAITRQFGIYNAILAGFIGLIVAMGVYNLFLFFATKDKIYLIYVGYLVIVFFSTPFNNGQTLFFGQWFWSYFTVWQSLLFWLVTLFVDRYLDLATNAVNVRRWLWLLTSVLGGVFPLLNLSGISLVYLISPLQLITLVYTFSLLVCGFYLLYKGVHTARFY 336
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A0A1I2FEM1_9BACT (Signal transduction histidine kinase n=2 Tax=Thermoflexibacter ruber TaxID=1003 RepID=A0A1I2FEM1_9BACT) HSP 1 Score: 71.2 bits (173), Expect = 2.400e-11 Identity = 48/141 (34.04%), Postives = 73/141 (51.77%), Query Frame = 1
Query: 4 VGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPF------WLEYFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLINIDANTLMNL 408
VGTL +L NK K D + G F+G++L+M YNLFL ATKD +Y+ YV Y+ S+ + TF N YPLL F +Y F +F +L+ R++ P L L++ IP +++I +++L
Sbjct: 185 VGTLLSLHQNKTKTDYIVGGFVGLILMMFLYNLFLLIATKDRVYIWYVLYLFSTIFIFTFLNQYPLLVYLFPKLRYASQQYIISLQNISYLFAAVFAIDFLNFRRHVPYFRVYLLCLLLVMIGVIPCCNILHIIPFPILSL 325
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A0A3C0I963_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Microscillaceae bacterium TaxID=2053581 RepID=A0A3C0I963_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 1.380e-9 Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 4 VGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYP---------LLTSPFWLEYFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFIL 336
+G+L +LT K D ++ F+G+MLI++ ++LF+ ++ IYL Y Y+ +S VL F N YP LLT W +Y+ WS+ + FI LF +L ++ P ++ IL
Sbjct: 173 IGSLQSLTKLKTINDFITAGFVGVMLILLVFSLFIYNNLRERIYLHYAGYLLASIFVLPFLNNYPFVQRITLGGLLTPIDWWKYYLGWSSFIFLFITLFSVNFLRIKHYHPYFYRAIMIL 292
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A0A2G5L1W9_9BACT (Uncharacterized protein n=2 Tax=Reichenbachiella sp. 5M10 TaxID=1889772 RepID=A0A2G5L1W9_9BACT) HSP 1 Score: 64.7 bits (156), Expect = 4.140e-9 Identity = 48/168 (28.57%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 7 GTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPFWLE---YFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLIN-IDANTLMNLYHFNMILFHFFLLYVGYYLWWKTIKNASYY 498
G L+ +++ + + LFIG ML + YN+FL ++T+D I++ Y+ Y+ + F NGY L + + + ++ VW++ F YLDL +NAP L +L +L V +PL+ + + + + +LF+ L G Y+W K + +A YY
Sbjct: 200 GDLTQISSYLLHKESIPLLFIGFMLCIFIYNVFLLFSTRDLIFIPYLIYLLFVTYAVPFHNGYVLFSEEWMWQGNPFYTVWTSVGYLSGGWFAIIYLDLPKNAPRLRYWIILLMAVLVVIVPLLDASGWLHVGIMAMIVSTSSLLFNLSLWSAGVYVWIKGVSHAHYY 367
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: UPI001996F00A (GHKL domain-containing protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI001996F00A) HSP 1 Score: 63.2 bits (152), Expect = 1.480e-8 Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 4 VGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGY---------PLLTSPFWLEYFFVWSTAMQFFIY-LFCTQYLDLRQNAPLLHKTSFI 333
+GTL++ + K D++ G+++G ML+++ YNLFL ++TK+ +YL YVAY+AS ++ Y P++ S + V STA+ LF ++L R+ P LHK SF+
Sbjct: 166 IGTLNSFMEDIHKLDLIQGIYLGFMLLILLYNLFLYFSTKEKLYLYYVAYVASITWFMSTVYQYVFEYLWPGLPIINS------YAVASTALTILTATLFTREFLHTRKLTPRLHKISFL 279
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Match: A0A1M6JMV9_9BACT (7TMR-DISM extracellular 2 n=4 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6JMV9_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 4.740e-8 Identity = 47/169 (27.81%), Postives = 83/169 (49.11%), Query Frame = 1
Query: 7 GTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAYIASSALVLTFANGYPLLTSPFWLE---YFFVWSTAMQFFIYLFCTQYLDLRQNAPLLHKTSFILALLLSVFIPLMRLIN-IDANTLMNLYHFNMILFHFFLLYVGYYLWWK-TIKNASYY 498
G LS ++ + D + +FIG ML + YN+FL +T+D ++L Y+ Y+ + F NGY L + + + ++ VW+ +F YLDL+ AP +L +L V +PL+ + + + ++F+ L + G Y+W K I++A YY
Sbjct: 162 GDLSTMSHYQLHKDTIPLIFIGFMLCIFIYNVFLFLSTRDIVFLPYLLYLLFVTYAVPFHNGYVLFSEEWMWQGNPFYTVWTGIGYLTGAIFAILYLDLKNTAPRFRVWIILLTFILVVIVPLLDVSRWFHVGIMAKIVSTTSLVFNLSLWFSGLYVWIKGRIEHAHYY 330 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128681.5762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128681.5762.1 >prot_M-pyrifera_M_contig128681.5762.1 ID=prot_M-pyrifera_M_contig128681.5762.1|Name=mRNA_M-pyrifera_M_contig128681.5762.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp YVGTLSALTANKFKYDMLSGLFIGMMLIMIFYNLFLAYATKDTIYLSYVAback to top mRNA from alignment at M-pyrifera_M_contig128681:1..498- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128681.5762.1 ID=mRNA_M-pyrifera_M_contig128681.5762.1|Name=mRNA_M-pyrifera_M_contig128681.5762.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig128681:1..498- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128681:1..498- >mRNA_M-pyrifera_M_contig128681.5762.1 ID=mRNA_M-pyrifera_M_contig128681.5762.1|Name=mRNA_M-pyrifera_M_contig128681.5762.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig128681:1..498- (Macrocystis pyrifera P11B4 male)back to top |