mRNA_M-pyrifera_M_contig128667.5758.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A7W1D2E5_9ACTN (DUF1697 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1D2E5_9ACTN) HSP 1 Score: 60.8 bits (146), Expect = 1.470e-9 Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 16 HIMFLADEAPTDTADRLG-DHSP-DEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKIAAALSD 240
H+MFLAD +L D SP DE+ GRE+++RYP G+ RSKL + +R L T ATARN T K+ + D
Sbjct: 103 HVMFLADAPEGKALAKLDPDRSPPDEFEVRGREIYLRYPNGSGRSKLTTDYFERSLGTSATARNWNTITKVLKLMQD 179
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: UPI001C6E3332 (DUF1697 domain-containing protein n=1 Tax=unclassified Mumia TaxID=2621872 RepID=UPI001C6E3332) HSP 1 Score: 59.7 bits (143), Expect = 3.760e-9 Identity = 34/78 (43.59%), Postives = 41/78 (52.56%), Query Frame = 1
Query: 1 EPKYHHIMFLADEAPTDTADRLG--DHSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKIAA 228
EPK H+ FLA E D L D PD IGRELH+RY G ARS + + + + TARNL T K+AA
Sbjct: 96 EPKLCHVWFLASEPSADAVRALESYDFGPDRVAPIGRELHLRYADGVARSAITAPRLLKLSGVVGTARNLRTVEKLAA 173
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A1T4YZR5_9ACTN (Uncharacterized conserved protein, DUF1697 family n=1 Tax=Aeromicrobium choanae TaxID=1736691 RepID=A0A1T4YZR5_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 1.410e-8 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 1
Query: 1 EPKYHHIMFLADEAPTDTADR--LGDHSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKIAAALSD 240
E K HH+ FL E PT+ LG PD IGR+LH+RY +G A +KL L+ R L + T RNL T K++A ++
Sbjct: 94 ERKAHHVYFLL-EPPTEQQVEALLGRGLPDGLAVIGRDLHIRYAEGVAHTKLTPALILRTLGSHGTGRNLNTVEKLSALAAE 174
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A7V8WJK0_9ACTN (DUF1697 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8WJK0_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 1.570e-8 Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 16 HIMFLADEAPTDTADRL-GDHS-PDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKIAAALSD 240
H+MFLAD +L D S PDE+ GRE+++RYP G+ RSKL + +R L T ATARN T ++ + +
Sbjct: 103 HVMFLADAPGKKAVGKLDADRSRPDEFEVRGREIYLRYPNGSGRSKLTIDYFERSLGTSATARNWNTITRVLQLMQE 179
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A3D2J3V3_9CHLR (DUF1697 domain-containing protein n=1 Tax=Ktedonobacter sp. TaxID=1932716 RepID=A0A3D2J3V3_9CHLR) HSP 1 Score: 53.9 bits (128), Expect = 6.350e-7 Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 1 EPKYHHIMFLA---DEAPTDTADRLGDHSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKIAAAL 234
EPK+ ++FLA DEA TA P+E +G+E+++ Y +G RSKL NNL++++L TI T RN T ++ L
Sbjct: 99 EPKWIAVVFLATAPDEA-AQTALLQTYVGPEEIHILGKEMYIYYSEGMGRSKLTNNLIEKKLKTIGTTRNWNTVLQLQKML 178
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A838X7T9_9ACTN (DUF1697 domain-containing protein n=2 Tax=Actinomycetia TaxID=1760 RepID=A0A838X7T9_9ACTN) HSP 1 Score: 53.1 bits (126), Expect = 1.130e-6 Identity = 29/75 (38.67%), Postives = 38/75 (50.67%), Query Frame = 1
Query: 1 EPKYHHIMFLADEAPTDTADRLGDHS-PDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKI 222
E K HH+ FL + + L PD IGR+LH+RY G A +KL L+ R L + T RNL T K+
Sbjct: 94 ERKAHHVYFLLEPPTEQQVEALMSKGLPDRLAVIGRDLHIRYADGVANTKLTPALILRTLGSHGTGRNLNTVEKL 168
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A3L8PRZ1_9ACTN (DUF1697 domain-containing protein n=1 Tax=Aeromicrobium phragmitis TaxID=2478914 RepID=A0A3L8PRZ1_9ACTN) HSP 1 Score: 53.1 bits (126), Expect = 1.150e-6 Identity = 36/74 (48.65%), Postives = 39/74 (52.70%), Query Frame = 1
Query: 1 EPKYHHIMFLAD----EAPTDTADRLGDHSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPT 210
EPK HI FLA +A D A R D PD IGR+LHVR+ G A SKL V R L TARNL T
Sbjct: 94 EPKLAHIYFLASTPAPDAVADVASR--DLGPDLAQVIGRDLHVRFADGAAASKLTAPFVARVLGVPGTARNLRT 165
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: M7A372_9ACTN (Uncharacterized protein n=2 Tax=Gordonia TaxID=2053 RepID=M7A372_9ACTN) HSP 1 Score: 52.0 bits (123), Expect = 3.100e-6 Identity = 30/76 (39.47%), Postives = 38/76 (50.00%), Query Frame = 1
Query: 1 EPKYHHIMFLADEAPTDTADRL--GDHSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKI 222
E K+ HI FL D + L D DE V IG +LH+RY G A +KL ++ R L T RNL T R +
Sbjct: 94 EEKFAHIYFLTGTPTADASHALVDKDFGDDELVVIGADLHIRYANGVAGTKLTAPVIARTLGVQGTGRNLRTVRTL 169
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A8J7KR81_9ACTN (Uncharacterized protein (DUF1697 family) n=1 Tax=Longispora fulva TaxID=619741 RepID=A0A8J7KR81_9ACTN) HSP 1 Score: 51.2 bits (121), Expect = 6.140e-6 Identity = 32/77 (41.56%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 1 EPKYHHIMFLADEAPTDTADRLGD---HSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKI 222
+PK H+ FL+ APT D +PDE V G E + Y G+ RSKL N+L++RRL + TARN T K+
Sbjct: 94 DPKSVHVDFLS-AAPTKAKLATLDPAPFAPDECVVDGTEAFLWYANGSGRSKLTNDLLERRLGVVGTARNWNTVTKL 169
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Match: A0A0U4C5K2_9ACTN (Uncharacterized protein n=1 Tax=Aeromicrobium erythreum TaxID=2041 RepID=A0A0U4C5K2_9ACTN) HSP 1 Score: 50.4 bits (119), Expect = 1.140e-5 Identity = 30/76 (39.47%), Postives = 39/76 (51.32%), Query Frame = 1
Query: 1 EPKYHHIMFLADEAPTDT--ADRLGDHSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRRLDTIATARNLPTCRKI 222
EPK H+ FL DE D A D D+ +GR+LHVRY G A S++ V R L T RNL T +++
Sbjct: 92 EPKLSHVYFLLDEPTPDAVRAFEAEDWRGDDVRVLGRDLHVRYRDGVAGSRITPARVRRLLGHHGTGRNLTTVQRL 167 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128667.5758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128667.5758.1 >prot_M-pyrifera_M_contig128667.5758.1 ID=prot_M-pyrifera_M_contig128667.5758.1|Name=mRNA_M-pyrifera_M_contig128667.5758.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp MFLADEAPTDTADRLGDHSPDEYVAIGRELHVRYPQGTARSKLVNNLVDRback to top mRNA from alignment at M-pyrifera_M_contig128667:258..500- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128667.5758.1 ID=mRNA_M-pyrifera_M_contig128667.5758.1|Name=mRNA_M-pyrifera_M_contig128667.5758.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig128667:258..500- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128667:258..500- >mRNA_M-pyrifera_M_contig128667.5758.1 ID=mRNA_M-pyrifera_M_contig128667.5758.1|Name=mRNA_M-pyrifera_M_contig128667.5758.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig128667:258..500- (Macrocystis pyrifera P11B4 male)back to top |